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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:113040..114621- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035880 ID=XLOC_035880|Name=XLOC_035880|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1582bp|location=Sequence derived from alignment at sc0000339_pilon:113040..114621- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAAGCGCCGCAAACCGCCAGTTCCGCTGTAAAAAAAATGAG
CCCTGTGGTCAGCGGTATGATGATGACTGGCACCATCTTCGGGTCTGCTT
CAATTTTACTCCCTGGGGTTGTCTCACAAGTCGGGGTAGGCTCATTCTTT
CTGATGCTATTTTTCTATTTGATATTGTCATACGCTTGTACAATGCTTGC
AAATTACGTATTTGGTGATTTGTTAAGCAAAACCCCGGAAAATGACGAAT
CGTTGCGGAGACCATTACAATATTGCACTGAACGTGCATTTGGTAAGAAA
TCATGGCTCAATATGCTTTTTACTTGCATTCAAATATCCAGCAACCTTTC
CCTCGTCGTTTCGTGTACCATGTTTGCTGCTACCATTTTAGAATCTGCAT
TGCCAATCTTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGG
CTACTTATAACATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCTTT
CAAAGAATTGGGTTTCGTTGGACCATCAGCTGTTTTTTTCAGTGTGACTG
CATTATTCTTGGTTATTGTATCAGGATACATAGTGCAAGCAAATAATATC
TTGCCGCCAGACCCTTTAACAAAGAGTGTCTTAGAGAAATCACTACCGTG
GATAGACTACACACCACCATACACATTTTTCTCAGTTTCTGGCACTATAT
TTTTCTCACTTGCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTATA
GATCCAGATACTGAATCTCTTAATAGGACAGTCACAACATCAGCTATATG
TGTTTATATATTATACTGTGCAGCAGGCTATGTGACCTACTTGTTATTCA
GTGATTACGTCATCGAAGTTTCGATTGTTGATACGATACAAAGGATAGCG
AAGGGAGCAGAAAATTCTACTTTGTTGGTACTTGCCAAGATCATCGAAGC
TCTTTTGGTGCTCCACTTCGTTTGTGCTATATGTCTTGCTGGTAATCCGG
TTTACTTGTACTTGGAATCCGTCTTCACAGTTCCGAATGGTATGTTTTTC
TCACGATTTCCTGTATTCGCAATCTTCGTTTATTATTCTTTGTCCTCAAA
TCTTTTGAAATTAGTATCTTTGTCCACCCTAAATGGAGTTCAGTGAATTT
CTATTTAGTAAAGTTATAAATTGTTCAAAGGTTGTATTTCAAAAGCCGAA
CATGGGATAATCACGATACCATCGGATTTTAACTTCTTACTTTTATCCTT
ACTGGTTTAGATTAATGTTATTCTACTAAAACATTTGTGATCAAAGGTTT
TAATATTTTCTCATAGAATTTTGTTGGAAGCGGTTTATACTACGAACTCT
CATTTTTGGCGCTTGCAATTTGATTGTCATTGTATTTCCAAAACTTTCGC
AATTCGTATCTTGGCTTGGTGGAGGATTTTTGTTCAATCTGGCGACATTC
GTTCCAATCATTTTGTATTTATGTTTATGTGAAACTTCACTGACGACCAA
AGTGTTCTGTTGGTTTTTATTCACTTTATCGCTGGTGATTGCTATCGGAG
TGAATTATGTGGGACTGGCTGTTCTTTTATAA Coding sequence (CDS) from alignment at sc0000339_pilon:113040..114621- >XLOC_035880 ID=XLOC_035880|Name=XLOC_035880|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000339_pilon:113040..114621- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAAGCGCCGCAAACCGCCAGTTCCGCTGTAAAAAAAATGAG
CCCTGTGGTCAGCGGTATGATGATGACTGGCACCATCTTCGGGTCTGCTT
CAATTTTACTCCCTGGGGTTGTCTCACAAGTCGGGGTAGGCTCATTCTTT
CTGATGCTATTTTTCTATTTGATATTGTCATACGCTTGTACAATGCTTGC
AAATTACGTATTTGGTGATTTGTTAAGCAAAACCCCGGAAAATGACGAAT
CGTTGCGGAGACCATTACAATATTGCACTGAACGTGCATTTGGTAAGAAA
TCATGGCTCAATATGCTTTTTACTTGCATTCAAATATCCAGCAACCTTTC
CCTCGTCGTTTCGTGTACCATGTTTGCTGCTACCATTTTAGAATCTGCAT
TGCCAATCTTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGG
CTACTTATAACATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCTTT
CAAAGAATTGGGTTTCGTTGGACCATCAGCTGTTTTTTTCAGTGTGACTG
CATTATTCTTGGTTATTGTATCAGGATACATAGTGCAAGCAAATAATATC
TTGCCGCCAGACCCTTTAACAAAGAGTGTCTTAGAGAAATCACTACCGTG
GATAGACTACACACCACCATACACATTTTTCTCAGTTTCTGGCACTATAT
TTTTCTCACTTGCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTATA
GATCCAGATACTGAATCTCTTAATAGGACAGTCACAACATCAGCTATATG
TGTTTATATATTATACTGTGCAGCAGGCTATGTGACCTACTTGTTATTCA
GTGATTACGTCATCGAAGTTTCGATTGTTGATACGATACAAAGGATAGCG
AAGGGAGCAGAAAATTCTACTTTGTTGGTACTTGCCAAGATCATCGAAGC
TCTTTTGGTGCTCCACTTCGTTTGTGCTATATGTCTTGCTGGTAATCCGG
TTTACTTGTACTTGGAATCCGTCTTCACAGTTCCGAATGATGAAAAAGAA
AGCGCCGCAAACCGCCAGTTCCGCTGTAAAAAAAATGAGCCCTGTGGTCA
GCGGTATGATGATGACTGGCACCATCTTCGGGTCTGCTTCAATTTTACTC
CCTGGGGTTGTCTCACAAGTCGGGGTAGGCTCATTCTTTCTGATGCTATT
TTTCTATTTGATATTGTCATACGCTTGTACAATGCTTGCAAATTACGTAT
TTGGTGATTTGTTAAGCAAAACCCCGGAAAATGACGAATCGTTGCGGAGA
CCATTACAATATTGCACTGAACGTGCATTTGGTAAGAAATCATGGCTCAA
TATGCTTTTTACTTGCATTCAAATATCCAGCAACCTTTCCCTCGTCGTTT
CGTGTACCATGTTTGCTGCTACCATTTTAGAATCTGCATTGCCAATCTTG
CCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGGCTACTTATAAC
ATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCTTTCAAAGAATTGG
GTTTCGTTGGACCATCAGCTGTTTTTTTCAGTGTGACTGCATTATTCTTG
GTTATTGTATCAGGATACATAGTGCAAGCAAATAATATCTTGCCGCCAGA
CCCTTTAACAAAGAGTGTCTTAGAGAAATCACTACCGTGGATAGACTACA
CACCACCATACACATTTTTCTCAGTTTCTGGCACTATATTTTTCTCACTT
GCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTATAGATCCAGATAC
TGAATCTCTTAATAGGACAGTCACAACATCAGCTATATGTGTTTATATAT
TATACTGTGCAGCAGGCTATGTGACCTACTTGTTATTCAGTGATTACGTC
ATCGAAGTTTCGATTGTTGATACGATACAAAGGATAGCGAAGGGAGCAGA
AAATTCTACTTTGTTGGTACTTGCCAAGATCATCGAAGCTCTTTTGGTGC
TCCACTTCGTTTGTGCTATATGTCTTGCTGGTAATCCGGTTTACTTGTAC
TTGGAATCCGTCTTCACAGTTCCGAATGAATTTTGTTGGAAGCGGTTTAT
ACTACGAACTCTCATTTTTGGCGCTTGCAATTTGATTGTCATTGTATTTC
CAAAACTTTCGCAATTCGTATCTTGGCTTGGTGGAGGATTTTTGTTCAAT
CTGGCGACATTCGTTCCAATCATTTTGTATTTATGTTTATGTGAAACTTC
ACTGACGACCAAAGTGTTCTGTTGGTTTTTATTCACTTTATCGCTGGTGA
TTGCTATCGGAGTGAATTATGTGGGACTGGCTGTTCTTTTATAAAATTTT
GTTGGAAGCGGTTTATACTACGAACTCTCATTTTTGGCGCTTGCAATTTG
ATTGTCATTGTATTTCCAAAACTTTCGCAATTCGTATCTTGGCTTGGTGG
AGGATTTTTGTTCAATCTGGCGACATTCGTTCCAATCATTTTGTATTTAT
GTTTATGTGAAACTTCACTGACGACCAAAGTGTTCTGTTGGTTTTTATTC
ACTTTATCGCTGGTGATTGCTATCGGAGTGAATTATGTGGGACTGGCTGT
TCTTTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:113040..114621 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1042-1305:265 |
| Aaloc | 1-1038:1583 |
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