|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:109204..111633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035879 ID=XLOC_035879|Name=XLOC_035879|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2430bp|location=Sequence derived from alignment at sc0000339_pilon:109204..111633- (Clytia hemisphaerica_ch_hm2_pilon)
GAGGGAAGAGAAAGCAAAGTGATGTTTTGTAACTGCCACAAATATGTTTT
TATTTTTGTCAAGATATTTTTGACGCTAATATTCTGTCTACAAGTGCAAG
GTATACAGTTTTCAACGTTCTACCTTCTAGAGGTTGGAACTTTTAATGTG
ATAATTTTATGTGAAAAATATAAATATATAGCTTAAGTCAGGAGGCTTCG
TAGAACTGCTATACCAAAGCGAGTACCAAAGTACCAAAGATGAAGTTACT
AGCATAAATGGATAAAATGCTCAATTTTTTTATTTCTCGTGTTTAATCTT
TATTTTCAACATTTTTAGAATGATTAATTTGAACAAAGATTATAGTATAT
AATTTTTGAAGAATTGGTCGAAAATGCCGACAACTAAAACAAAGATTAAA
AGTCCCAGGTGGGGGGGGGCAAATTGGGTGCTGCGTATGTGCGAGTCATA
AGGGTTCCTTTTTCAAATCCTCGAAAGTCTCTCAAAGGGGTACAAAAACC
ATTAAAAAGCAAGTTGAGTCTCTTTAAGGGTCTAAAATCGAAATTTCCTC
TCCCAAAGGGTCATGATTTTCCAAAATTTGGACAAAAAACGAGCGAAAAT
GGACAAAAATTGTCAAAAACGTCGAAATTCAGTCTTTCAAAGGGTTGATT
TTCGATTTTTGGCTCGAATATACCCGTCACCTCGCAAACTTAGTAGCCCC
CGCCCGGGGCGGGCTTAAAGTGAACGACATGACTTTAATACCTTCTTAAA
ATCCCTTTGTAAATATTTTTCCAGATACTTGTCTTTTTTTTTTAATTTAG
CAGGTAATGTTGACGCATTGGAGAAAGTTTCAACAAGATCTCCTCCACCA
AGAATGGCGGTTGTGGCGTACCTACCAAACAATTTGCAGAAAATGTACGA
GTTCAACATGATGTTGTACGGATCATGGAAATATGTTGAATCTCATCAAC
AGGTTGAATTTGCGCGCTTTTCTGGAATTCTTGATTAGGATATTACTAGT
AGAGTGGAGTTTCCTTAATTGGAACCTCTATAATTCAAATGCCTCCTTAA
AACAAGTTTTATATTTTCTTCAGTTAACAATGTCTTTTAAACCTAACTCC
ATAACTCGCAATCTCCGTAACTCGATCATCGACTGCGTGTTTGAGCATCG
ATGGCTCGAGTTACGGAGACTCTGTAAAAGATTGCAAAAGTGTAACACTC
TTTTTATCGCATACTTTAGACTATAACTAGAAAACTGTATAGGGGAATGA
ATATACCATCAGAGATAGCAGGCTCTCAATTCAATTCTAAAACCAAACCA
ACTAAAAAAAGTGAGACAACTTTATGTTATACTTAAACCATTTTGATTCT
CTCTCTTTGCAGATCTTCTTCAATCAGAATCCTAAACCGTCTATCAATCT
CATCGACCTGATTGTGTTTTTTGACCAATCATTTGACGAACAGATACCAG
TTGATTGCCAAATTTTCCGTTACCATGGAAAAGAGGCTACTCGTCACCAA
CTCTTACAAAACGACGCTACCTTGAATTCATTCGTCGATAAAAACAACAA
CAAAGATGCTTCCGAATTTCGTCTTCAACTTGATCAGCTGAAGAATACAA
ATCATACGAAAACACGGATTTCCGAAGATGAAATCATGTTTCGGTCAGCT
TGTTGGAGAATACCTCAATCGAACAATACGTTCAAAGATGGATTCTCTTC
ATTGGATAATCTCTTACCGTTTCTTAGAGAAGGTATCGACGAAATGTTTG
AGGAATATCAATATATTCTCAATGTAGACACTGATTCGATACTGACACCA
GGGCTATGGACCCTCAATCTTAATCAAGTGGTCCTCGCATCTGGTGTTCA
ACAAGAATGCCCTGCAGATCGTAAATTATTAACCTTACAAGCTGCAACGA
AAATTGGTTTAGAGTTTCCCCTAGGTAGACCTTGGACAACATTTTCAATA
TTTGGTGAAACCAATATCATCCTGCCATTTATGTTTGAGGTTTACCGACT
TTCTGTTTTCCTTATGCATGATGACTTGAATGAATGGAATGCAAAACACG
AAGAACAATCACATAAACAGTTGCAAATAGCTAAAGACCTTGTAATATAT
CAAGCAGCAAAGATGTTACAGATTGAAAATAAAGGAAGGTTTCGCATTCT
AGATTCATTGCCGTGTTCCAGAAGCCATCAAAAAGGTACACGAAGTGTTC
TGAGCATTTCTGTAAAGAAGGACCATAAATGTCGTTTCGATAAAAGTCAA
TTCTTTAACCTTCTCGCGAATCTTCAAACGATGACCCCGGGAGAGAAAAA
AGATTTTTTAAGCCATGCTAAAGAAGAATGGAATCACGAGCAAGCCTCAA
AACTGAATCTTGAAAACTATGCCAAATTTATCGCGTATAAGTATGCAGCG
ATTCATTTTAGTGAGATCTTTAAATTCTGA Coding sequence (CDS) from alignment at sc0000339_pilon:109204..111633- >XLOC_035879 ID=XLOC_035879|Name=XLOC_035879|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2640bp|location=Sequence derived from alignment at sc0000339_pilon:109204..111633- (Clytia hemisphaerica_ch_hm2_pilon)
GAGGGAAGAGAAAGCAAAGTGATGTTTTGTAACTGCCACAAATATGTTTT
TATTTTTGTCAAGATATTTTTGACGCTAATATTCTGTCTACAAGTGCAAG
GAGGGAAGAGAAAGCAAAGTGATGTTTTGTAACTGCCACAAATATGTTTT
TATTTTTGTCAAGATATTTTTGACGCTAATATTCTGTCTACAAGTGCAAG
CAGGTAATGTTGACGCATTGGAGAAAGTTTCAACAAGATCTCCTCCACCA
AGAATGGCGGTTGTGGCGTACCTACCAAACAATTTGCAGAAAATGTACGA
GTTCAACATGATGTTGTACGGATCATGGAAATATGTTGAATCTCATCAAC
AGCAGGTAATGTTGACGCATTGGAGAAAGTTTCAACAAGATCTCCTCCAC
CAAGAATGGCGGTTGTGGCGTACCTACCAAACAATTTGCAGAAAATGTAC
GAGTTCAACATGATGTTGTACGGATCATGGAAATATGTTGAATCTCATCA
ACAGATCTTCTTCAATCAGAATCCTAAACCGTCTATCAATCTCATCGACC
TGATTGTGTTTTTTGACCAATCATTTGACGAACAGATACCAGTTGATTGC
CAAATTTTCCGTTACCATGGAAAAGAGGCTACTCGTCACCAACTCTTACA
AAACGACGCTACCTTGAATTCATTCGTCGATAAAAACAACAACAAAGATG
CTTCCGAATTTCGTCTTCAACTTGATCAGCTGAAGAATACAAATCATACG
AAAACACGGATTTCCGAAGATGAAATCATGTTTCGGTCAGCTTGTTGGAG
AATACCTCAATCGAACAATACGTTCAAAGATGGATTCTCTTCATTGGATA
ATCTCTTACCGTTTCTTAGAGAAGGTATCGACGAAATGTTTGAGGAATAT
CAATATATTCTCAATGTAGACACTGATTCGATACTGACACCAGGGCTATG
GACCCTCAATCTTAATCAAGTGGTCCTCGCATCTGGTGTTCAACAAGAAT
GCCCTGCAGATCGTAAATTATTAACCTTACAAGCTGCAACGAAAATTGGT
TTAGAGTTTCCCCTAGGTAGACCTTGGACAACATTTTCAATATTTGGTGA
AACCAATATCATCCTGCCATTTATGTTTGAGGTTTACCGACTTTCTGTTT
TCCTTATGCATGATGACTTGAATGAATGGAATGCAAAACACGAAGAACAA
TCACATAAACAGTTGCAAATAGCTAAAGACCTTGTAATATATCAAGCAGC
AAAGATGTTACAGATTGAAAATAAAGGAAGGTTTCGCATTCTAGATTCAT
TGCCGTGTTCCAGAAGCCATCAAAAAGGTACACGAAGTGTTCTGAGCATT
TCTGTAAAGAAGGACCATAAATGTCGTTTCGATAAAAGTCAATTCTTTAA
CCTTCTCGCGAATCTTCAAACGATGACCCCGGGAGAGAAAAAAGATTTTT
TAAGCCATGCTAAAGAAGAATGGAATCACGAGCAAGCCTCAAAACTGAAT
CTTGAAAACTATGCCAAATTTATCGCGTATAAGTATGCAGCGATTCATTT
TAGTGAGATCTTTAAATTCTGAATCTTCTTCAATCAGAATCCTAAACCGT
CTATCAATCTCATCGACCTGATTGTGTTTTTTGACCAATCATTTGACGAA
CAGATACCAGTTGATTGCCAAATTTTCCGTTACCATGGAAAAGAGGCTAC
TCGTCACCAACTCTTACAAAACGACGCTACCTTGAATTCATTCGTCGATA
AAAACAACAACAAAGATGCTTCCGAATTTCGTCTTCAACTTGATCAGCTG
AAGAATACAAATCATACGAAAACACGGATTTCCGAAGATGAAATCATGTT
TCGGTCAGCTTGTTGGAGAATACCTCAATCGAACAATACGTTCAAAGATG
GATTCTCTTCATTGGATAATCTCTTACCGTTTCTTAGAGAAGGTATCGAC
GAAATGTTTGAGGAATATCAATATATTCTCAATGTAGACACTGATTCGAT
ACTGACACCAGGGCTATGGACCCTCAATCTTAATCAAGTGGTCCTCGCAT
CTGGTGTTCAACAAGAATGCCCTGCAGATCGTAAATTATTAACCTTACAA
GCTGCAACGAAAATTGGTTTAGAGTTTCCCCTAGGTAGACCTTGGACAAC
ATTTTCAATATTTGGTGAAACCAATATCATCCTGCCATTTATGTTTGAGG
TTTACCGACTTTCTGTTTTCCTTATGCATGATGACTTGAATGAATGGAAT
GCAAAACACGAAGAACAATCACATAAACAGTTGCAAATAGCTAAAGACCT
TGTAATATATCAAGCAGCAAAGATGTTACAGATTGAAAATAAAGGAAGGT
TTCGCATTCTAGATTCATTGCCGTGTTCCAGAAGCCATCAAAAAGGTACA
CGAAGTGTTCTGAGCATTTCTGTAAAGAAGGACCATAAATGTCGTTTCGA
TAAAAGTCAATTCTTTAACCTTCTCGCGAATCTTCAAACGATGACCCCGG
GAGAGAAAAAAGATTTTTTAAGCCATGCTAAAGAAGAATGGAATCACGAG
CAAGCCTCAAAACTGAATCTTGAAAACTATGCCAAATTTATCGCGTATAA
GTATGCAGCGATTCATTTTAGTGAGATCTTTAAATTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:109204..111633 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 253-1320:1069 |
| Aaloc | 103-252:1629 |
| Aaloc | 1-99:2431 |
|
