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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000769_pilon:14098..15396- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035856 ID=XLOC_035856|Name=XLOC_035856|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1299bp|location=Sequence derived from alignment at sc0000769_pilon:14098..15396- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACACAACTTTTCGACCGTTCAAAGGTGATGGACACAGACGGCTACA
TCCTACTCAATTACTGGCTTTAACTAACACCCTCCTACCAAGAGACGGTC
GGCGAACCCCTCCACCCCGACAAAGAATGGAAGATCAAGAAATTAAGCGG
TCTTTCGACCTCGCGATCGGTTTAATCGTAGCTTTATTGAACGTGGCGGA
AATCATCATGATCTTACGTATACAGCGAAAGAAGAAAATTTTCGAATTAG
TTTTACTCAGTTTATCTTTTTCGGACCTGTTATTTGGCCTGTCCAATGGA
GCCATATGTGTGGTCTTTCTCGGGAAATGGCGAAATGAGGAAGTCCTTGA
AGTAACCACCAGCATTTATTTCTTATTCATTTTATGTTCGATTTTTCATC
TCGTTTTTATCGCTTTGGATAGACTATGGGCTATCGTACGCCCCATCAAA
CACAATATCTTCATGACTCGTAAGAAAGTCTATATTATTTTATCCATGAT
ATGGATGCTTGGAATTGTAGTAACTTTATCATTATATTATACAAATGATG
AAGGACATTTATTTCAAGATCAATACGAATTTGAATTAGTTGAAGATGAA
GACGATAATCATAATACCACCACCGCCCCCACAAATACCACCCTAACGCC
CTTATCAACCATCACAACAGCTCCGCCCATTACAATACACCATATAATAT
CAAACGTCACTGATGGTGGACGTAATCGAACGAAACGCCCACGAACTACA
CGGCAACCGCCCTCCAAAAAGCCGCCTCAATTCCGTAAAAAATTACTAGC
AGACAAAATACAAGTGTTCAAAAAATTTATGAGGTTGCTTTTATCTGGAT
TCATTTTAGGTGCTGACATCCTCTTAGTTCTCATATATTCACTAATTATG
TACAGAGTGCGGCTAGCTAAGAAGAAAGCTAAACTACATCACCAACAGAA
AACTTCACACAATAAAGTTAATTTGGTCTGTGTTTTTGTCGCCGGATCAT
TTATAATGTTCACCGTACCGTACGCATTAAATCGAATCATTACAGGTGAA
GGACAATTTTGGGTGAATGTGATTTTAGTATCTAATTCCGGTATGAATAG
TATTATTTATTTCTTCCGTAATCGTTGCGAGGAGGAAGTCCAAAAAAAAC
GCAAAAAAGAGGGCGTGTCATCGTCGAGTGGCTTGACACCTGCCACTACA
CCGCTTTCCAGTAGGCACCATATCAATCTGGCTGATTCCGTTGATACAAC
ACCGGTTGGCACACCAAAACAAGAACGTATCATCATGAAAAAAATTTAA Coding sequence (CDS) from alignment at sc0000769_pilon:14098..15396- >XLOC_035856 ID=XLOC_035856|Name=XLOC_035856|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2598bp|location=Sequence derived from alignment at sc0000769_pilon:14098..15396- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACACAACTTTTCGACCGTTCAAAGGTGATGGACACAGACGGCTACA
TCCTACTCAATTACTGGCTTTAACTAACACCCTCCTACCAAGAGACGGTC
GGCGAACCCCTCCACCCCGACAAAGAATGGAAGATCAAGAAATTAAGCGG
TCTTTCGACCTCGCGATCGGTTTAATCGTAGCTTTATTGAACGTGGCGGA
AATCATCATGATCTTACGTATACAGCGAAAGAAGAAAATTTTCGAATTAG
TTTTACTCAGTTTATCTTTTTCGGACCTGTTATTTGGCCTGTCCAATGGA
GCCATATGTGTGGTCTTTCTCGGGAAATGGCGAAATGAGGAAGTCCTTGA
AGTAACCACCAGCATTTATTTCTTATTCATTTTATGTTCGATTTTTCATC
TCGTTTTTATCGCTTTGGATAGACTATGGGCTATCGTACGCCCCATCAAA
CACAATATCTTCATGACTCGTAAGAAAGTCTATATTATTTTATCCATGAT
ATGGATGCTTGGAATTGTAGTAACTTTATCATTATATTATACAAATGATG
AAGGACATTTATTTCAAGATCAATACGAATTTGAATTAGTTGAAGATGAA
GACGATAATCATAATACCACCACCGCCCCCACAAATACCACCCTAACGCC
CTTATCAACCATCACAACAGCTCCGCCCATTACAATACACCATATAATAT
CAAACGTCACTGATGGTGGACGTAATCGAACGAAACGCCCACGAACTACA
CGGCAACCGCCCTCCAAAAAGCCGCCTCAATTCCGTAAAAAATTACTAGC
AGACAAAATACAAGTGTTCAAAAAATTTATGAGGTTGCTTTTATCTGGAT
TCATTTTAGGTGCTGACATCCTCTTAGTTCTCATATATTCACTAATTATG
TACAGAGTGCGGCTAGCTAAGAAGAAAGCTAAACTACATCACCAACAGAA
AACTTCACACAATAAAGTTAATTTGGTCTGTGTTTTTGTCGCCGGATCAT
TTATAATGTTCACCGTACCGTACGCATTAAATCGAATCATTACAGGTGAA
GGACAATTTTGGGTGAATGTGATTTTAGTATCTAATTCCGGTATGAATAG
TATTATTTATTTCTTCCGTAATCGTTGCGAGGAGGAAGTCCAAAAAAAAC
GCAAAAAAGAGGGCGTGTCATCGTCGAGTGGCTTGACACCTGCCACTACA
CCGCTTTCCAGTAGGCACCATATCAATCTGGCTGATTCCGTTGATACAAC
ACCGGTTGGCACACCAAAACAAGAACGTATCATCATGAAAAAAATTTAAA
TGGACACAACTTTTCGACCGTTCAAAGGTGATGGACACAGACGGCTACAT
CCTACTCAATTACTGGCTTTAACTAACACCCTCCTACCAAGAGACGGTCG
GCGAACCCCTCCACCCCGACAAAGAATGGAAGATCAAGAAATTAAGCGGT
CTTTCGACCTCGCGATCGGTTTAATCGTAGCTTTATTGAACGTGGCGGAA
ATCATCATGATCTTACGTATACAGCGAAAGAAGAAAATTTTCGAATTAGT
TTTACTCAGTTTATCTTTTTCGGACCTGTTATTTGGCCTGTCCAATGGAG
CCATATGTGTGGTCTTTCTCGGGAAATGGCGAAATGAGGAAGTCCTTGAA
GTAACCACCAGCATTTATTTCTTATTCATTTTATGTTCGATTTTTCATCT
CGTTTTTATCGCTTTGGATAGACTATGGGCTATCGTACGCCCCATCAAAC
ACAATATCTTCATGACTCGTAAGAAAGTCTATATTATTTTATCCATGATA
TGGATGCTTGGAATTGTAGTAACTTTATCATTATATTATACAAATGATGA
AGGACATTTATTTCAAGATCAATACGAATTTGAATTAGTTGAAGATGAAG
ACGATAATCATAATACCACCACCGCCCCCACAAATACCACCCTAACGCCC
TTATCAACCATCACAACAGCTCCGCCCATTACAATACACCATATAATATC
AAACGTCACTGATGGTGGACGTAATCGAACGAAACGCCCACGAACTACAC
GGCAACCGCCCTCCAAAAAGCCGCCTCAATTCCGTAAAAAATTACTAGCA
GACAAAATACAAGTGTTCAAAAAATTTATGAGGTTGCTTTTATCTGGATT
CATTTTAGGTGCTGACATCCTCTTAGTTCTCATATATTCACTAATTATGT
ACAGAGTGCGGCTAGCTAAGAAGAAAGCTAAACTACATCACCAACAGAAA
ACTTCACACAATAAAGTTAATTTGGTCTGTGTTTTTGTCGCCGGATCATT
TATAATGTTCACCGTACCGTACGCATTAAATCGAATCATTACAGGTGAAG
GACAATTTTGGGTGAATGTGATTTTAGTATCTAATTCCGGTATGAATAGT
ATTATTTATTTCTTCCGTAATCGTTGCGAGGAGGAAGTCCAAAAAAAACG
CAAAAAAGAGGGCGTGTCATCGTCGAGTGGCTTGACACCTGCCACTACAC
CGCTTTCCAGTAGGCACCATATCAATCTGGCTGATTCCGTTGATACAACA
CCGGTTGGCACACCAAAACAAGAACGTATCATCATGAAAAAAATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000769_pilon | genome | sc0000769_pilon:14098..15396 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 112-1302:1192 |
| Aaloc | 1-108:1300 |
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