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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:113584..120464- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035847 ID=XLOC_035847|Name=XLOC_035847|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6881bp|location=Sequence derived from alignment at sc0000339_pilon:113584..120464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAAGCGCCGCCAACAACCGATACCACAAGGAAAATGAACCC
TGTGGTCAGTGGTATGATGATGACTGGCACCATCTTCGGCTCCGCTACAA
TATTACTCCCTGGGGTTGTGTCCCAAATCAGTACCACATCATATTTCTTT
ATTTTGTTCTTCTATGTGGCACTGGCTTATGCATGTACGATGTTTGCTAA
TTATGTATTTGGTGATTTGTTAAGCAAAACCCTGGAAAATGACGAATCGT
TGCGGAGACCATTACAATATTGTACTGAACGTGCATTTGGAAAGAATTCA
TGGCTCAATGTACTTTTTACTTGCATTCAAATCACCAGCAACCTTTCCCT
GGTTGTCTCTGCTACAATGATTGTTGCTACCATTTTAGAATCTGCATTGC
CAATCCTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGGCTA
CTTATCACATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCTTTCAA
AGAATTGGGTTTCGTTGGACCATCAGCTGTATTTTTCAGTGTGACTGCAT
TATTCTTGGTTATTGTATCAGGATACATAGTGCAAGCAAATAATATCTTG
CCGCCAGACCCTTTAACAAAGAGTGTCTTAGAGAAAGCACTACCGTGGAT
AGACTACACACCACCATACACATTTTTCTCAGTTTCTGGCACTATATTTT
TCTCACTTGCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTATAGAT
CCAGATACTGGATCTCTTAATAGGACAGTCACAACATCAGCTGTATGTGT
TTATATATTGTACTGTGTAGCAGGCTATGTGACCTACTTATTATTCAACG
ATTACGTCATCGAAGTTTCGATTGTTGATACGATACAAAGGATAGCGAAG
GGAGCAGAAAATTCTACTTTGTTGGTATTTGCCAAGATCATTGAAGCTCT
TTTGGTGCTCCACTTTGTTTGTGCTATATGTCTTGCTGGTAATCCGGTTT
ACTTGTACTTGGAATCCGTCTTCACAGTTCCGAATGGTAAGGCTTTATAT
ATTTCTCCTTAAAAATCACTTACTCCTTTGGAGTGGGGAGTTGGTAGAAA
GTCGATCATTGATTGATTTTGGGGTCATTTTTACCAAAACACCCTAGGAA
ATATAGACTTTGACTTTTTTTAGGAATATGTAGTATGATACGATAGGAAG
GGGCTAGTTATGAAATGCTACTTGGGTGATTTTTCAGAAAAGTTGAAAGG
TGACCTTCATACAATTGAGTGAGATAGAGTGATTATCTGAAAATCTCTGT
TAAGGGTAAATTTATTGTTCATTCCTCAGCCTCGTTCAACACTTTGTAAA
ATTCTTGACCCTACCATATGACTTCGAATAAACGCCCGGGCGTTAAATAA
ATTTTTAAGATTTTAGGAAGTGCGTTTAATCTAAGGGGCGTTCGAAGTAA
TACGATATTTGTTAAAATAGACTATTTATTTTCTCATAGAATTTTGTTGG
AAGCGGTTTTTACTACGAACTCTCATTTTTGGTGCTTGCACTTTGATTGT
CATCATATTTCCAAAACTTTCGCAATTCGTATCTTGGCTTGGTGGAGGAT
TTTTGTTCAACCTGGCGACATTCGTTCCAATCATTTTGTATTTGTGTTTA
TGTGAAACTTCAATAACGACCAAAGTGTTCTGTTGGTTTTTATTTACTTT
ATCGCTGGTGATTGCAATTGGAGTGAATTATGTGGGACTGGATGTTCTTT
TATAAAAGATCAAACATATTGAAGTTATTTCGAAGCTTGCGTGTCTTTTT
AAAGTTTTTAAACTTAGATGTACACTGTATTTACGAAGTTTGGTGTTGTG
AAACCTATCACCAAGTTTCTATATCCAATTTTAAGGGAATCCAAGAATCC
AAAATTGTTGTTCAGAAATGCTGCTCACCTTGGAGACCTGCTGCGGTTAT
GAGTACAAACGGATGTGAAAATCAATCTGTCCCCCGAATTTTCAAGGGTC
GACGCACCGGACTCTGCAAGAATTCCAAGGCTTTACCTATTGTCATGCTT
TTTTGTCGTAGTTAGATGTTTTTCTTTAGATCGAGAAGTTAATTTTACAA
TTGAAATAATTTCTAAGTCTTTTGGGTGCGTCTCTTTGTTGGATTGATCT
GCAAATAGTCGACTTGGAAGACAAAATTTAAGCAAATGCCTTTTTAAATT
TAGCAAAATCTCCTCTCAGTTAATATAATAGCAACGAGGGGTAAATCTCT
CGAAAATTTTGTTCGAGATTTGTGAATTATTTTTGATTTATGATTTATTT
TTGATTTATTTTTTATATTTTTTATTTTAGTGATTTACCTCGAATAGCAA
GACAATTTTTTGTCAAAAGGCTTGGTTTTATTTTGAGTTTTTGTGGATCG
CATTCGCATTCTCAAGTCTGCTCCAAAAAAAAAGGACAGTCCGTAATTTT
TGAAAGAAACTTTGAACCCTACAGTATGTGGCCCCCAAAACGTCGATTAA
ATTTGAAATTTCTCTCAAATCTAGTATTTTTCTAATGGCCCCCAAAACGG
AGGTTTGAAATTTTAGCGATTTCTCGAGATATTTTTAAGATATGAATACA
ATTTCATTTTTGTCTTTACTGTCTCAAATGACTTGAAAGAATCAAAGAAT
TTTATCTCGGACATGGAATGAAGGGAAAACGATTGATTGCATACGAAATT
TTTTGCCAAACGAGACAAAACTATCCACTTGCAACTAATTGTACACCCCT
TCTCACAGACCCGATAGCATTTTTTTCTATGCCAGTGGGGGTAAAAATAA
CAGCCTAAAACTCGATGGGGATTAATATATTCTCATTTTTTTATAGCTGG
GGATTCAGTGAGGATGGGAGAAATAGTACAATGAGCCCCCCCCCCCCCAG
TCGACCCTCAATTCACGTATTCACGCACAAAATTTTATCAATTCACGTAT
TCACGCGCGAAAAAAACCATTTTCACGTTCACGTGCCAATTTTGCTTTTA
TATTTTTGGTTAAATCGATTGTGACCTTTCTATGGTTTCTTTAGACGGTT
TGACCTATGCTAATGCCAAACATTTTCGCCAATATAAAGTTTTTTGCAGT
TTTGTGACCTTATTATCGATAGCGTCGATCATTTAAGGCATCTTTTACAG
CTATTTAAGCTTTAATAGAGCAATGTTTTAGGTCTGCCGCGCAAAAGTTA
CAAAAAACTACCCCTCTGGCGTAGGGTGGGCTGTTGTTGTGGGATTTTCT
TCCTCGCAGACCCGTAAAAGGTCTTTTTTGATTTTAAATCGAGGTTGGGC
TAATCATGGTTTGAGAAGCCGTAGACTTCAACAAAAACTTCAAAGAGGTG
GAGCGGTAGTGTACAACAAGAGGACGCAAATTCCAATGTTTGACACCTGC
CTATTTCATGGGAAAAAAATGTATGTAAAAAAGCAATGCGAGCGCGAAAT
CTTTCGACAATTTTCGCTCTTTTATGACTGAAAAAACGACCTTAATACGC
TAGTGTTAGTCAAGTCTGCCTTGTTTGGTCACACAATTCTTTGATTTTAT
TCAACACTGACCATTTGTTGGCAAAAATCTGAAACAGCAAGCGACGTACC
TGCCGTACCCGGTGCGGTATTCCAAGAGCTTCGCCCAAGAGAAAACTTTT
AAAATTTAGAATGCCTAGATTGCTTGAAAAGGCATCATGTGCATCATTAT
CTATGAGAATTATTTTTTACTTCTTCGATGCTGCATGCATACGAGATGTT
TTAGAACTACCTACTTTTGCAAAGTATTGAAGGAGCAAAAATCTCTCTAA
GTTAACGCAGTATCATTTTGTGTATTGTATTGTATAGTAACAATATAAGT
GACTACGGAGAGATGACCATTATTAAACGCTGACAGAGAAAATTTTCTCT
AGACTCTTTTGTTTTGGCTAAAAACGCTCTCGTATTTGCATCACAAAAAT
TGACATTAAAAATGAAAAAATACGCCCTCAGAAAAATAATGAAAATATTT
GTTTAAGATATCTTTGATGATTTTAATGTTATAAAGTTTTGGTTATTTCG
AATGACAATAAGTTAATCCAAGACTATGCAAGCGAGGCGAGCAAGAAATT
TTACAGATTTAGGTTTACAGATTTTTAGAGTTTCCTTGTATTTTAGACAA
TGATTTGCTTTTCACGTTCACGCTAAAAATCTCGATTCACGAATTCACGG
TGGAAAAATCTTATTTTCACGTTCACGCTGATATCTCAATTCACGTATTC
ACGCGCTAAAAAAGTCCAATTCACGTACTCACGTCAGAAAAAAGGCTCAT
TCACGTGTCACGCCAGCCCCTGGGGGAGCCCCTACAATATTGCTTATCTG
ATTATTTTCAGAGGGTAGATTTTGTAAACACACTCTATCAAACTTGTGTT
TCTATTTGATATCCAATCTCTATTTATTCAGGGTAACGACAGTATTTTTC
AAAGCTTGTTGTTAACATGCTTTTCCAATAGCAACATAGAGAAGAGTCGA
GTTATTTTCTTTTGAAAATAGTTTTGTGCAAGAATTTGATCGTGATAAAG
TCTTTGGTTTAACTTTCCATCTTTGCTATTTTTCGTGATTTTTGATCGTC
TCTAGCCCTACTTTGAGGGAGGAAAGGTGTACTTAGGTAAAAATGGGTGC
TGGGTATGTGCAGACGATAAGAATCGGTTTTTCATCTTCGTAAGTCTCTG
CTAAGGGTTACAATCATCAGAAAATTTTAAAGTAGTCCCTCTAAGGCTTA
GTCTATCTCTGTCCCAACATGCGATTTTTTATCACCGGTGTCGATGAATA
AAAAGCCATGGTCATCTAGTACAGGCAACCTAAGGGTCGGAATATTCGTG
ATTTTTAGGATTTTTTTTATATATAGAGAAAAAATTTGACATTTTTGAGT
CCGTTTGAAAGATTTTTGTCAAAATTTTCGATAAAACGTGACCCTTTGAG
AGGGAAATTCTCGATTTTAGTGAGTTTGGGACTTTTTGAAAGATTGACCT
CTCGACTCGTACCCCTTTGAGGGACTTTTGACGTATGAAAAAGGGTACCC
TTATGGCTTGCACATACCTATTTCGCCTAAGTTACTCCCCTGGATTTATA
TGTAGATAATAGGAAAAAGAAATTCCATTTTATTCCCATTCCAATTATAA
TAATCTCCAGTGAATTTTTTTTCTTCTAAAACAATTTCACTTGGCCATTT
TTTATCAAAAAATTTGAAAAACCCGTAGGAAAATGAAAGACATGTGCCCA
AAATAGGCCAAAACCCCCAAAAATAATTCCAGTAAAATACGATATAACAC
GATTTTTTATATTTTTTTCTTTCGACCGTGAAAATAAGTTCCCGCTAAAA
TTAGCTTCTTTAAGGTAACAAAAATCCTTCTTACTATATCAGTCGTTTAT
CTATCGAAACACTTTACTGATAGATTTAATCATGGTGGACTCAAATCTTT
TTATTGTGTGCAGAATACATACATTTATACCTCCATGATAATATCTAGTC
GTATGAAACTAACCACAAATTTAATTTCTTTCTTATCAACAATAAATGCA
ATAACATTCCTGATTTTACTTTATAAGTAGTTTGTATTACTGTATGTTGT
CTATACTTTAGATAGAATCATTTTGGTCACGGATGACATTGCGATATGAT
GTTTGAACGAGAAATGAAAGGCACTAACAACAAACACTATGGATCAAAAG
TTAACGGTTGCCCAGACAACATGAATCAAATTGAATTATGGAATAGCAAA
AATTTGTAACTAATTTTAACTCTCTTATGTTAGGGATCTGTTGACTTGAT
TTAAAGGAGAATCTTTTTTCATTTCTTTTTTTTAGAGCAAAAGATGAAAA
AGAAAGCGCCGCAAACCGCCAGTTCCGCTGTAAAAAAAATGAGCCCTGTG
GTCAGCGGTATGATGATGACTGGCACCATCTTCGGGTCTGCTTCAATTTT
ACTCCCTGGGGTTGTCTCACAAGTCGGGGTAGGCTCATTCTTTCTGATGC
TATTTTTCTATTTGATATTGTCATACGCTTGTACAATGCTTGCAAATTAC
GTATTTGGTGATTTGTTAAGCAAAACCCCGGAAAATGACGAATCGTTGCG
GAGACCATTACAATATTGCACTGAACGTGCATTTGGTAAGAAATCATGGC
TCAATATGCTTTTTACTTGCATTCAAATATCCAGCAACCTTTCCCTCGTC
GTTTCGTGTACCATGTTTGCTGCTACCATTTTAGAATCTGCATTGCCAAT
CTTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGGCTACTTA
TAACATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCTTTCAAAGAA
TTGGGTTTCGTTGGACCATCAGCTGTTTTTTTCAGTGTGACTGCATTATT
CTTGGTTATTGTATCAGGATACATAGTGCAAGCAAATAATATCTTGCCGC
CAGACCCTTTAACAAAGAGTGTCTTAGAGAAATCACTACCGTGGATAGAC
TACACACCACCATACACATTTTTCTCAGTTTCTGGCACTATATTTTTCTC
ACTTGCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTATAGATCCAG
ATACTGAATCTCTTAATAGGACAGTCACAACATCAGCTATATGTGTTTAT
ATATTATACTGTGCAGCAGGCTATGTGACCTACTTGTTATTCAGTGATTA
CGTCATCGAAGTTTCGATTGTTGATACGATACAAAGGATAGCGAAGGGAG
CAGAAAATTCTACTTTGTTGGTACTTGCCAAGATCATCGAAGCTCTTTTG
GTGCTCCACTTCGTTTGTGCTATATGTCTTGCTGGTAATCCGGTTTACTT
GTACTTGGAATCCGTCTTCACAGTTCCGAAT Coding sequence (CDS) from alignment at sc0000339_pilon:113584..120464- >XLOC_035847 ID=XLOC_035847|Name=XLOC_035847|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2340bp|location=Sequence derived from alignment at sc0000339_pilon:113584..120464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAAGCGCCGCCAACAACCGATACCACAAGGAAAATGAACCC
TGTGGTCAGTGGTATGATGATGACTGGCACCATCTTCGGCTCCGCTACAA
TATTACTCCCTGGGGTTGTGTCCCAAATCAGTACCACATCATATTTCTTT
ATTTTGTTCTTCTATGTGGCACTGGCTTATGCATGTACGATGTTTGCTAA
TTATGTATTTGGTGATTTGTTAAGCAAAACCCTGGAAAATGACGAATCGT
TGCGGAGACCATTACAATATTGTACTGAACGTGCATTTGGAAAGAATTCA
TGGCTCAATGTACTTTTTACTTGCATTCAAATCACCAGCAACCTTTCCCT
GGTTGTCTCTGCTACAATGATTGTTGCTACCATTTTAGAATCTGCATTGC
CAATCCTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGGCTA
CTTATCACATTATGAAAAAGAAAGCGCCGCCAACAACCGATACCACAAGG
AAAATGAACCCTGTGGTCAGTGGTATGATGATGACTGGCACCATCTTCGG
CTCCGCTACAATATTACTCCCTGGGGTTGTGTCCCAAATCAGTACCACAT
CATATTTCTTTATTTTGTTCTTCTATGTGGCACTGGCTTATGCATGTACG
ATGTTTGCTAATTATGTATTTGGTGATTTGTTAAGCAAAACCCTGGAAAA
TGACGAATCGTTGCGGAGACCATTACAATATTGTACTGAACGTGCATTTG
GAAAGAATTCATGGCTCAATGTACTTTTTACTTGCATTCAAATCACCAGC
AACCTTTCCCTGGTTGTCTCTGCTACAATGATTGTTGCTACCATTTTAGA
ATCTGCATTGCCAATCCTGCCATTGAATTTAAATTCATCAAACTTAACTC
GCATTTGGCTACTTATCACATTTCAAATATCCAGCAACCTTTCCCTCGTC
GTTTCGTGTACCATGTTTGCTGCTACCATTTTAGAATCTGCATTGCCAAT
CTTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTTGGCTACTTA
TAACATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCTTTCAAAGAA
TTGGGTTTCGTTGGACCATCAGCTGTTTTTTTCAGTGTGACTGCATTATT
CTTGGTTATTGTATCAGGATACATAGTGCAAGCAAATAATATCTTGCCGC
CAGACCCTTTAACAAAGAGTGTCTTAGAGAAATCACTACCGTGGATAGAC
TACACACCACCATACACATTTTTCTCAGTTTCTGGCACTATATTTTTCTC
ACTTGCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTATAGATCCAG
ATACTGAATCTCTTAATAGGACAGTCACAACATCAGCTATATGTGTTTAT
ATATTATACTGTGCAGCAGGCTATGTGACCTACTTGTTATTCAGTGATTA
CGTCATCGAAGTTTCGATTGTTGATACGATACAAAGGATAGCGAAGGGAG
CAGAAAATTCTACTTTGTTGGTACTTGCCAAGATCATCGAAGCTCTTTTG
GTGCTCCACTTCGTTTGTGCTATATGTCTTGCTGGTAATCCGGTTTACTT
GTACTTGGAATCCGTCTTCACAGTTCCGAATTCAAATATCCAGCAACCTT
TCCCTCGTCGTTTCGTGTACCATGTTTGCTGCTACCATTTTAGAATCTGC
ATTGCCAATCTTGCCATTGAATTTAAATTCATCAAACTTAACTCGCATTT
GGCTACTTATAACATTTTTGGGACTGCTACCAACCCAAATGATCGGTTCT
TTCAAAGAATTGGGTTTCGTTGGACCATCAGCTGTTTTTTTCAGTGTGAC
TGCATTATTCTTGGTTATTGTATCAGGATACATAGTGCAAGCAAATAATA
TCTTGCCGCCAGACCCTTTAACAAAGAGTGTCTTAGAGAAATCACTACCG
TGGATAGACTACACACCACCATACACATTTTTCTCAGTTTCTGGCACTAT
ATTTTTCTCACTTGCTGGATATATGTTGGTATTACCGAGCCTGGCAGCTA
TAGATCCAGATACTGAATCTCTTAATAGGACAGTCACAACATCAGCTATA
TGTGTTTATATATTATACTGTGCAGCAGGCTATGTGACCTACTTGTTATT
CAGTGATTACGTCATCGAAGTTTCGATTGTTGATACGATACAAAGGATAG
CGAAGGGAGCAGAAAATTCTACTTTGTTGGTACTTGCCAAGATCATCGAA
GCTCTTTTGGTGCTCCACTTCGTTTGTGCTATATGTCTTGCTGGTAATCC
GGTTTACTTGTACTTGGAATCCGTCTTCACAGTTCCGAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:113584..120464 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 463-1170:709 |
| Aaloc | 1-459:6882 |
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