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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:1713059..1723719+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035843 ID=XLOC_035843|Name=XLOC_035843|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=10661bp|location=Sequence derived from alignment at sc0000058_pilon:1713059..1723719+ (Clytia hemisphaerica_ch_hm2_pilon) AAACCACTGTTGGCGAAAGATCAAACACCTTGCAAATCCATGGTATGGAA
TCAATACAAATTTGAAGGTTGAAGTAAAAAGAACTTCAGGTCAACTCAAC
AGTACTTACATGAGCCCtccagtcacctttcaaatcacgcaatcacgcac
taACAATTTCCAAATCAAgttatcacgagttaaatttccttAATCACGTT
AATCACGTACTTTAAAGtcttaaatcacgaaatcacgaacttgaaaaaac
gccaatcacgccatcacgaaaaccgctgggggggaCCTCTTACATACTCT
tcgttttctataaaaacaagtaAATTTTTATCGAGGCTCAACTGTTGTTA
TCTTTTAGGACAAGTAGCTCCTTATTATTCTTGTCCAGTTCTTAATAGAA
GAAAAATTGCGGTAGTTTAGCCTTTATAGCTTGATATTCAGCAACTCGAC
ACCCAGCttagttttcaagtttttaagccgttttttgttctcataaaatt
gttcttatcaaaaactCAGGAACTACTGGAGCTctggacttgaaattttc
actagTGATATATATTGACCATCTAAGATAGTGTgaacaattttcaattt
agtcacGTGACCTGTTGGTATTATATAGACGAGTCCGATTTTTACCCAAA
ATGCTCACTTTTAGCATAACAACTCGTCCGATTGAGCTGAAATTTTGGCT
GCGAGCTTGTATTACCAATACCTAACActtgtcaaaattcaaaatcaata
gcaTTTTCAAATCactacaatcggcgccgaaatatttggcacaacagggc
aattccctcaaaactttaaaaccgcaagtgaatTTTAAGTGCTTTGTAGT
ACCGTtgaaaagtagagttttaaattctgagttttaacattagacttaag
acttataACCTTAGGATCTCAGTATCTAAAAGATCAAAAATGTTCcgata
aggctgagaatataacctggaagccacttaaaaTCCAATGAttcaaagtg
gaagtactgaagcTGTAATTCTCGtccgagctttaaattctgtaaaacgt
taaaatacccaaaatttccaatatatttcggcgccgattgtacATACAGt
atttgaaaaaagaacaaatttggGCCAGTCCGTAACATATACGATACCAA
CAGGTGGCAAAAGATTGGCCCTCTACCCAAAAAATACATGTCATTTGGAG
ATGCCTCacaaaattttagcaaaaaatgtTAAAGTGAAAAAATAGTTAGA
GGGGGTTCATATTTtcggtattttcaaagaatgctGGCGTCACCAGGtgg
cgatgacgtcatcaatgatgtcaaaattttcaccaaagatgccaaTGCAT
ATTTGGTGCAtacttgcaaaatttcaactcaattggataaatattttaaa
agttatcaaaaagagGGCTCTCTTcccaagatgctcgaagggttaaacGA
ACGCCAATCTTGAAAGATTTCATATTATATCATTGAATTCAATGACTTGC
TTTTCTTTGACagtaaaattaaattaattttatcaataataaaaaaatta
acaatattTAGCCACAGCAAAATCCATAATTACCATCATTAAAAACAGAC
AATGTCGAAAAGATCACTAAACGAAGGCTTTGTTGATGAAAGGCCATCAA
AATCATTAAAGGTTGATGATGGTTCACCGTTTGCAAATCCCTGGAAAGGC
AGTAACGCTGTATTGGTCGTAGAAGATATCGAATTACATGTTCATACTCA
AACACTTTCTCTTGCTTCTCCTGTTTTCGAAGCAATGTTTAATGGTAATT
TTGTCGAAGCTCAAACTCGAAGAGTTCCACTTGAAGGGAAATCATATGAG
ACCGTTGAACACATGTTAAAATTGGTATATAACTTGACAAATAGACTAGG
TAACTGGCTTTAGTACTTTTTTAATTATATCAGATTAATCTCATAAGAGA
TGATCCTTTCTGTGCATACCACGCAGAGGCTCTTAAGGGATATGGCCGAT
GTGACGATCAACCTGGTTGTTCagtcaaaacaatttaaacGCGTTGCTTT
TTGCTTGCAAACGAAAGCGAAAGGTGATTGTTTTTCCTTAGCTAATTATT
ACAAGTTATAAGTTATTGGTTCAGTTAAAAATAACCTTCATTTGTCAACT
TCATTCTCGAATTTTGTGCGACATTCTAAAGCTTTAGAATCATCCACTTG
AAATCATCTTAACAACGAGTTACAGTTTAGATATCTTTTTCTTACTACAA
CCTTTCACTGTTTTATCTTCTTCTTTAGAACCAAAGACATTGGCATGCCT
ATCTTGTAAGCTTGGAGAAACAAAGTGCAAGAAAGACAAAAAAGGTTATG
ATATAAATTAAACGTGTATAATATTCTgtcatttaaaggttttgtttttt
aaaataagagttATATCGTTTgcctaccttaagtggattaattttcgcga
aatttagtccacgcgaaaattttgaaggcctttgattcgcgaaaattagt
ccacgcgaatttatttggaattttacaatcgcgaaaataaaagtTCGCGA
AATCTAGATAACATGTTACAATCAAAACATATTACGAGTTCAACTCttca
tttcaattataaacTCCAGTAACCTCctaataccgggtgcgccacaaaaa
agtttctctctttaaaactaatcttctcgaaatctaaaagttttaaacga
accattcttatttcattagaaagaagaaagataaacttaaattttgatgg
gtcatttattaaattagattcatcagatcaaaagttatgctcaattgaat
gaaaaagttattttcagaaagtgctcgaaaacgttgaaaatcgagctatc
aaatttctattttaaaattggcaatcgccaTAGCCtatacatgattaaga
gcatttttccgtAACTAAACACTTAAATTTtaaaactgaagggtcgaaag
ggtttaaaatcttcattagagtcattttaatttacttttaccaaaaTATT
CCTCAGAtctttggttctagactggataaagtcgaTGTAGGGCTGGgtgt
acctcaaaacccatatctgatgtattttatgaatttttgccagatttctt
tgcctttttcgacgaattttcttccatttgttATAAtgcaaccttccttt
atataacaaaaggtcatttagacagctaattatcatttttgattactgaa
acgaaaatgctgatgcatcatgtaattatgcttctgtttaatttgataag
tccatttttaacgtttttgagcactttcaaaaactaactttttgatttaa
ttgagcataacttttgatctactgaatcaaatttaataaatgacccctca
aaatttaagtctatctttcttctttccgatgaaataagaatggttctttt
aaaaatgttatatttcgagaaaattagttttaaagagagaaacttttttg
tggcgcacccggtagtactttctttgaagttttttgaaagcttttgagtg
ACTTTGTCTGCCTTTGTTCGATTCAAAAACACATCTCTTTTCTAGTTACA
ATTTATAtagtcgcgaaattaaataaagaaggccattttcgcaaaattta
atcctcgcgaaatctttaaattctcgtctcgcgaaaattagtacaggcga
aaatttatccacttaaggtactcatcaatttcaattcacaagctttttca
cattggatcagaggaatgtaaagagatggaaaaacagcttttctgattac
tcaaagttcaacgatcacttctattgaaaattctattgtaaaaacgttga
ttaggtcattaaatgaaagtccagaaaagacggctcgccatacaaatcgg
acggtttctacatgatttgacgataaaaatgaaaatttgtttttcctttt
ttgccgattactagttcaatttttaaggagcaatatttttaccaatgtat
agcaaaagaaattcttaacgcaatgatattaaattggttcttgtaaaact
gtcaaaagtcaagtaaaatcaagatgaagttataattttctcgagctcta
gctttccatataggggtgcggtcatgatgcggttatatcagtagaatcgc
tagggaattttgagcaagaagatataggtaccttttcgtataggagaggt
gtacccaaaatataagccctaaaagtttgcgcataatcaggcttgaaaca
aaagaattttgtcacaacacgctaattatgcagattttttatagcgacaa
caaaagaaacctatttactcgacataaactcccttaagggcaagagacct
ggtatatgacgagccgtttttccattgttttcaagaagctgtttttccat
ctctttacattcctctgattggattgacacggatgtggagcaagattggt
cagaaaaaggaaaagaaaaacatatttttacttatatcagcataatataa
caaaaggcagacactgccTTATATGAAATAatgtgtgtctgatatgaaac
agaaacacttatgtaaaaataaaacgcAAAAAGTGCAAAGGGGCGTTTGT
TAATCGAAATACTGACCTGTTTTTACTGTTCAATTTTCgaaacaaattca
aatttatCATGCCACATCCAATATTAAAGTACGGCAACTTTTTCTTCATT
GTCATTGAATATCGAAACACTGACAGATAGAAGGGCTTTACACGCACCGT
CCAACCCACACAGCTTTGTAATATCTACCATataaaaaaacttcttttaa
tacttaacctttccagcgcgcaactttttaaattttcacgctgtcagcgc
gcaacattttttcagaaaatagacatgttcagttatttgatcataactca
agaactaggaatctttagaaaaaaagtaaggtatccctgaaaagctactt
aaattctacaacttttagaccaagtaccaatccaaataaaatattcctac
aaaaatggtagcatcacgtaaaccacagttttttttcacgttttgcggta
atgtcactttttttgcatttttcacttctagagcaaaaaaaagtgggggg
aagttaattaaaaaatctgtcttttgctatttatcaatctatacatcatt
ttgaagtaatataccaaaaatcagcatccagaaaaatctgtatgtgtcac
accagcctcccaaatatcggtcacttttgccaaaaatcacgattttcggc
taaaaaaatccaatatatacaattttgaagtattttgatgataatgtgtt
tccagaagcagctacaacatcaataatggtgtaaaagtattccccaacta
tctaaacaacacttccagtcagtattcttagcttctgaagcttttgaagg
gtatcggctaccgtgaaactagatggcatagtcggcgacagttgcaaagt
ttccaaaaaccgCAAGCCTTTTGAGGCAAACTCATTGCTATCAAATCTGA
TCTCTTTTGCCCATAAGGAATGCTAAATGTcatcataataattccatgtg
gcTGTTATGTGGTTCCTGCCATCATTTTGATCCATATAAGCTGTAATCAG
GACATCGTTATGAGCCAAGAATTTCGGGGATCGATCGACCGTTGCTGGTG
GAGCGGAAGAAGTAGTGCAATTCAACATAAATCCaggcttttcaaattct
ttggtgctcctttgaaataaatgaggtgtagaaaacacttttgcattgaa
tttgtccactttccatgctccaacctgaataaaaagtaaaaagtattgta
agtttgggtcgactccgatggtttgtcgagaaaagtggtcaaaatgacaa
ataaatggatttttttatgctaaaaacaaaacacaaaatataagatatac
ttactggatgttttgccattataaaaacaatgtttccatgaagaaaagtg
gcctaaaccagtcaaaaaatccaagaactttagcagtaagttggaaaaac
ccatttcttggtcgccatcttgattcagtgtttttctctaccttttcttc
gaaatctgctgcctcaccacgtgatcaaaacattacatcaccatatatca
aaagaaagcttagaacctctacttttcgtttctctttacttctacggcta
gcaaagaagccaatgggagaaatatagcttagaagatcACTATATCAAAA
AGACGACTATACTCGTCCGCCGGAACGTATGCTCGACGACTATACTCGTC
CGCCGGGCTGAAAAGGTTAACTCcaacttttaaaattgatcTTTGTTATA
GGTCGTCGAAAATCATATTTTAATGGATGCTACCTATGCGGtttgtatta
taaaaagaatggtaaggaaattcatttaaacttatacaaactttcgcgag
cagaaactttcgcgaggtcaaaaaatcgcgaaattttcgacatttacttt
cgcgaatttgaggaaaaaatgtttttcgcgagcataaactttcgcgaatc
gttggatagaaatgagaattttcgaataaaaattgccttaaaaatgaaaa
atattccttaaatccgctaaaacggttgctcttcgactttaaaaagtCGT
CAAAGGATAATAATCTACCGAAAATTTTATATTGATTACGatttctagtc
ggttattactgataaccttataataaaactgtcaatcaaataatgtaaac
actaattaaatattcagcgcgcgtgagagaaaaggaaaataaccgtcTAG
AAgcggcataccggataagtgggatgggggaacctgggaacctaaagtgg
gaacctaaatgaacacctgaaaagtgggatgggggaacctaagtgggaac
ctaaatgaacaccggaaaagtgggatgggggaacctaagtgggtacctaa
atgaacacctgaaaagtgggatgggggaacctaagtgggaacctaaatga
acaccggaaaagtgggatgggggaacctaagtgggaacctaaaacctgaa
caccggaaaagtgggatggggggaacctaagtgggaacctaaatgaacac
cggaaaagtgggatgggggaacctaagtgggaacctaagttgtttaatta
ttaatagaattgaaatatttttctttaaaaacaaatacataaagataaga
aagatattatatgcaaggaaagaaaaaaccttttatcataatattaataa
gaacaccagttatttactttttacattacgtttcgcaaacaataatgttg
aaaataaaacaaagggaatttatttattcaattagctcaaaaaagcatgt
ttatttatcagcagttttatagtgcatctttttgaaaggttctttttagt
aaattgacttaattgactttaaactttaaaccgtcatatcttcaaatcta
gaaggaattagaagttcgtccatagctcgatggataacttagagcctctt
ctttcttttgcacggatctaatttgcttgaatacagaatctagtaaaaca
ttatttacgatctagtttttgttcactcttgatgcaatacacattgtttt
ttttttttttttattagcagctccaattttcgggtcagggctggggtcgc
ttagcatttaacggattctagctcgtttttctttctgtaccaaccaaaca
gtacagcgtgtgaatacacttcattaattaaaaatgtttgatagtaaaat
agaacatattgcacggcttgccacgtttcaatacacataagcatagatcc
acgggggggggggctcaaggtaaacgacctaccgtacgtgcggccctttt
ttccaagcttcccaaagtacactgtaagggtggaaatgagcaaaaatgag
aataagtgcactctaagggtttaaaatttggtcaaagccagtccggcttt
tagaatttcatccgaacaagtgtcatgttttaacactgggtaaaatttgg
aacatcaaatatgtccatccctatcaggatctgttctagaacatgttgac
caagaaaaagatctaggagtgataatcgatagtgacctgacctttgaagc
ccatatattcagtaaaatcaagaaagctaactctatcgttggcttgatta
gcaggagcttcgaatttctctcaccagatatgtttcgaacgcttttcatt
gcatttgtcagaccccatttggaatatgcacatgtagtatggtctccaag
gctaatcaaacatatcaatgcaatcaatcgagggcgtccaacgaagagct
acaaggctagttagttgctatagaaactactcatacgaagatcggctacg
actcatcaatctacctagcctaaagaccaggcggcaagttggtgatatgg
tggaagttttcaaaaacctccacatttatgacgagtctataaaatcagag
aaatttactcctcgaacacgaccacgacgtcagcatgattacgagcttca
aaggaactttgctaatgacggtacgagaggctaccaaagcaactctcttt
tttacagaagtgtgaaaccttggaatgatctagaagaagatattgttgaa
gcaccttccttacaagtcttcaaagagcgtttgataaaagagtgggagaa
aaaactttataaaatgtaaaatcataagttctgtttcatagaggtctATA
Gagctgcgaaatatattgctataaaaaatgaaaataaaaaaaaaaataaa
aaaaataaaaaattaggttcccacttaggttcccccatcccacttttccg
gtgttcatttaggttcccacttaggttcccccatcccacttttcaggtgt
tcatttaggttcccacttaggttcccccatcccacttttcaggtgttcat
ttaggttcctactttaggttcccaggttcccccatcccacttatccggta
tgcctctagaagctacttccaacgcctttttttcttcacctaaaatcgta
aagagagacatacagatttctgtatgtctgacccgtgcggtattgcattt
atttttctttctgtttattgcgcttttagaaatgctcatttatttatatg
ttcccatgttcaatgttactatgaaatatcatttagtcaaaaaagttgga
tggattctcaaaaacctaaaagggaagtagcttctagccgttgaaattca
gaaaagagacgcaacttcaccccttcaattcttttaatttagagcttgat
tttttgtatatgagtctgttttcaacgactagtttattAGTCTAAtggtt
ttatagatttccaatttttttgagaatttctcgcgagcataaacttttgc
gaattgccctgttaagaattttaaaagacatttgctttcgcgaaaaaggc
caaaactcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgtacgcc
taaagtattatACATGGTTGATCGGAAAGAAAGTTGTTTGTCCGTCCAGC
TtttctcgtgattggctcattagttttttctggttTGAGGCACAaagatg
taaaatggcaatgcctaaaatgtgacagagcccgattttcgaagaaaaaa
ataatttccggccggaaatccCGGAACTATGCCTGAATAaccggcatttt
ctcgagatttcatcattagttttttccgattttttgcacaaagatgcgta
ttagcaattgccaaaacatggccaagttcgatttttgagcACAATTTTTT
CCGGCTGCAAATGACgcaaatatgccggaaatcaccgtttttgcagattt
tcattggacttttactttatatttttcgtttttttgcacaaaaatattat
tgattacaatgcccaccatcaattcagcatgattcgattgtcaataaaac
tgacttttgaagtcggaactttctaaaagtcaccggaacagccgattATC
GCtggaaaaacggttttccttgaatttcttgagctttactttaaatttta
caCACTGATGCAGatgccgtttttgcagattttcctTGTTCTTTCACACA
AAATTATTATtcataacaatgcccaccatcaagcatgattcaattgtcaa
taaaagcgATTTTTGCAACCgaaactttctatttctattttccctttccc
ctccccccctccccatcaacaatcaatgatgaaatttaatgtgttatgca
ttttcgctaaacgttATAtcttctgactgattgttttcatttttctcctt
tttgctatctaactttcatcgtcaggtaggtccattcagcacgTGGCTTG
TTAACACTTGTATTGCCGACACTTAATAGTAATCTTCTTTGAAATCTTTA
GATCTTGAAAGACGTCTTTTTATCCAACATTTGGTATTGCTTGATGAACT
TTCAAAGGAGTACATGCTTGACGTTTTGGCTGACAAAATACAAGCTGAAA
TTGTCCACCAAAGTAAAGCTATCGCCAATTTGCAACACGCTTTCGATCTT
TTAGAAGCCTCAGAAAAAATTGCGGATTGTATGGAAACTGCAGCTACTTC
TATCAAGTACATCCGCCTTCATTTGGATTCGTATGGCGGGCTAAAGGATT
TGTTAAACGAAAGGAGTTTGACAATTGAAACCATTTTAAAGATGAAATCA
ATTGTACTGATCAATCTTCTAGAAAAATGGCCCGAATCAAATTTGTTCGA
GCACGAAGGGAAccaatataaaaaagaagcgaTGTTGTTAGCTAAAGAGC
TTTTTGACTGA Coding sequence (CDS) from alignment at sc0000058_pilon:1713059..1723719+ >XLOC_035843 ID=XLOC_035843|Name=XLOC_035843|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000058_pilon:1713059..1723719+ (Clytia hemisphaerica_ch_hm2_pilon) AAACCACTGTTGGCGAAAGATCAAACACCTTGCAAATCCATGAAACCACT GTTGGCGAAAGATCAAACACCTTGCAAATCCATGGTTGATGATGGTTCAC CGTTTGCAAATCCCTGGAAAGGCAGTAACGCTGTATTGGTCGTAGAAGAT ATCGAATTACATGTTCATACTCAAACACTTTCTCTTGCTTCTCCTGTTTT CGAAGCAATGTTTAATGGTAATTTTGTCGAAGCTCAAACTCGAAGAGTTC CACTTGAAGGGAAATCATATGAGACCGTTGAACACATGTTAAAATTGGTA TATAACTTGACAAATAGACTAGGTTGATGATGGTTCACCGTTTGCAAATC CCTGGAAAGGCAGTAACGCTGTATTGGTCGTAGAAGATATCGAATTACAT GTTCATACTCAAACACTTTCTCTTGCTTCTCCTGTTTTCGAAGCAATGTT TAATGGTAATTTTGTCGAAGCTCAAACTCGAAGAGTTCCACTTGAAGGGA AATCATATGAGACCGTTGAACACATGTTAAAATTGGTATATAACTTGACA AATAGACTAGAACCAAAGACATTGGCATGCCTATCTTGTAAGCTTGGAGA AACAAAGTGCAAGAAAGACAAAAAAGAACCAAAGACATTGGCATGCCTAT CTTGTAAGCTTGGAGAAACAAAGTGCAAGAAAGACAAAAAAGGTCGTCGA AAATCATATTTTAATGGATGCTACCTATGCGGtttgtattataaaaagaa tgGTCGTCGAAAATCATATTTTAATGGATGCTACCTATGCGGtttgtatt ataaaaagaatgATCTTGAAAGACGTCTTTTTATCCAACATTTGGTATTG CTTGATGAACTTTCAAAGGAGTACATGCTTGACGTTTTGGCTGACAAAAT ACAAGCTGAAATTGTCCACCAAAGTAAAGCTATCGCCAATTTGCAACACG CTTTCGATCTTTTAGAAGCCTCAGAAAAAATTGCGGATTGTATGGAAACT GCAGCTACTTCTATCAAGTACATCCGCCTTCATTTGGATTCGTATGGCGG GCTAAAGGATTTGTTAAACGAAAGGAGTTTGACAATTGAAACCATTTTAA AGATGAAATCAATTGTACTGATCAATCTTCTAGAAAAATGGCCCGAATCA AATTTGTTCGAGCACGAAGGGAAccaatataaaaaagaagcgaTGTTGTT AGCTAAAGAGCTTTTTGACTGAATCTTGAAAGACGTCTTTTTATCCAACA TTTGGTATTGCTTGATGAACTTTCAAAGGAGTACATGCTTGACGTTTTGG CTGACAAAATACAAGCTGAAATTGTCCACCAAAGTAAAGCTATCGCCAAT TTGCAACACGCTTTCGATCTTTTAGAAGCCTCAGAAAAAATTGCGGATTG TATGGAAACTGCAGCTACTTCTATCAAGTACATCCGCCTTCATTTGGATT CGTATGGCGGGCTAAAGGATTTGTTAAACGAAAGGAGTTTGACAATTGAA ACCATTTTAAAGATGAAATCAATTGTACTGATCAATCTTCTAGAAAAATG GCCCGAATCAAATTTGTTCGAGCACGAAGGGAAccaatataaaaaagaag cgaTGTTGTTAGCTAAAGAGCTTTTTGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000058_pilon | genome | sc0000058_pilon:1713059..1723719 + |
Properties
| Property Name | Value |
| Aaloc | 409-816:10254 |
| Aaloc | 349-405:6254 |
| Aaloc | 283-345:2281 |
| Aaloc | 43-279:1662 |
| Aaloc | 1-42:1 |
|