|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000194_pilon:378701..380870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035828 ID=XLOC_035828|Name=XLOC_035828|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2170bp|location=Sequence derived from alignment at sc0000194_pilon:378701..380870- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGAAGCTACAACCGAAGCTCCCGAAGTTACCACCGAAGTTTCTGAAGT
TACCACCGAAGCTCCTGAAGTTACCACCGAAGCTCCCGAAGTTACCACCG
AAGCTCCTGAAGCTACAACCGATGCTCCTGAAGCTACAACCGAAGCTCCC
GAAGTTACCACCGAAGCTCCCGAAGTTACCACCGAAGCTCCCGAAGTTAC
CACCGAAGCTCCTGAAGTTACCACCGAAGCTCCTGCAGTTACCACCGAAG
CTCCTGAAGTTACCACTGAAGCTCCAGAAGTCACCACAGAAGCTCCTGAA
GTTACCACCAAAGCTCCCGAAGTTACCACCGAAGCTCCTGAAGTGAGTAC
CACAGGATCGGAAGAAACCACTCAAGCACAAACAACTGAAGCTGAGACAT
GCAGTACACCCCATGACTACAGTGACCTACTCGGAAAATCGATGCTTTTC
TATAAAGCGCAACGATCAGGAATACTTCCTGACAACGATATCCCCTGGAG
ACGCAACTCTTTCGAAAATGACGGTCAAGGACAAGGTCATGATCTATCTG
GTGGTTACTTTGACGCTGGAGATTATGTCAAATTCAACTTCCCAATGGCT
GCAGCAACAACAGTGTTAGCTTGGGGTATGGTTGATTTTGCTGATGGATA
TAAGTTTGCTGGTAAATATGATGATGGATTGGCAACATTGAAATGGGCAA
CTGATTATTTCATTAAATGCCACACTGGTAAGAATGATTGAGTTTTAGGT
TGTTATTTTTTAAGTCTATCTTTTAGATAAAAAGTTATAGAAAAATCAAA
TCTAAATTAAATTAAAACGCATATTTAAAATCGGCGATGCTCAAAATTTT
AGTAAAAATCTTTTTTTTGGTCAATTAGAAAAACAAATATTTTAAGTGTA
ATCATTCCACACTAAATTATCTTTTCAAAGAGGTATAATACCTTTAATGA
TATTAATAACAATGTACAAGAGTATGAACTACTATTTTTTTTGGAACAGA
CCTTAGCTAAATAAAACACGTTATTTTAAGAGAGACATCACCATTGAGAA
TTTTCTAATATTTAATAATAATATTTCTCTGCCAGTTAAGCCAGTCTCAA
TTTGGAAATTAAACCTCTTTACAATTTAAGTTCGTCATTTTTCAGCAACA
AATGAATTATATGGCCAATGTGGTATCGGTAAAGATGACCATGAAGTCTG
GGGGCGAGAAGATGAATATTACACAAACTCTGGTAAAGCTAACCCAAGAC
CATGCTACAAAGTCGATGCAAATAATCCAGGTTCTGATCTAGCCGGTGAA
ACATCAGCTGCTCTGGCTGCTTCTTCCATTGCTTTTAAAGATTCGAACCC
AGGTTATGCTACTACGCTTTTACAACATGCTAAAGAGTTGTACACATTTG
CTAAAACCTTCAAAGGAGTTTATTCATCGAGTATCACAGATGCTCAATTC
TTCTACAACTCCTTCAGTGGTTACAACGATGAATTAGCATGGAGTGCTGC
TTGGCTATACAAAGCTACCGACGAGGAAAAATATAGAACCGACGCTGAAG
GGTTCTTCAATGAAATGCAACAAAACCCAGGTGAATTCTCCTGGGACAAC
AAAGGTCGTGGTGTAGCAGCTCTCTTATCACAGCTCACTGGGAAAGCAGT
TTACAAACAAAACGTCGATAGCTTTTGCAACCAGATGCAGAACAACCAGC
CGCGTAATCAATATGGATTGGTTTTCATCCAACAATGGGGATCAAATCGT
CATGCAGCAAATGTCGCTTTCATTTGCCTCGCTCATTCAAAAGCAACAGG
TCAATTCAGCGCATTCGGACGCAATCAAATCAATAAACTCCTTGGAGACG
AATCAATCAATCAACGCAGTTTTGTCGTCGGTTATGGCTTAAACCCGCCC
AATCAACCTCATCATAGATCCTCTTCATGCCCGAACCGCCCAGCACCATG
TGGATGGAACGAGTTCAATATCAAGGCCCCAAATCCACATGTTCTCACTG
GGGCGTTAGTGGGCGGTGCTCGATCAACAACTGATGTATATCAAGATAGA
AGGGATGATTTTATCGAAAATGAAATCACCCTTGATTATAATGCCGGCTT
TCAATCTGCCCTTGCCGCCCTTCTTGAGCTTCAAAAAGAAGGCGACTGCG
GTCAAAAATTAACATTTTGA Coding sequence (CDS) from alignment at sc0000194_pilon:378701..380870- >XLOC_035828 ID=XLOC_035828|Name=XLOC_035828|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3504bp|location=Sequence derived from alignment at sc0000194_pilon:378701..380870- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGAAGCTACAACCGAAGCTCCCGAAGTTACCACCGAAGTTTCTGAAGT
TACCACCGAAGCTCCTGAAGTTACCACCGAAGCTCCCGAAGTTACCACCG
AAGCTCCTGAAGCTACAACCGATGCTCCTGAAGCTACAACCGAAGCTCCC
GAAGTTACCACCGAAGCTCCCGAAGTTACCACCGAAGCTCCCGAAGTTAC
CACCGAAGCTCCTGAAGTTACCACCGAAGCTCCTGCAGTTACCACCGAAG
CTCCTGAAGTTACCACTGAAGCTCCAGAAGTCACCACAGAAGCTCCTGAA
GTTACCACCAAAGCTCCCGAAGTTACCACCGAAGCTCCTGAAGTGAGTAC
CACAGGATCGGAAGAAACCACTCAAGCACAAACAACTGAAGCTGAGACAT
GCAGTACACCCCATGACTACAGTGACCTACTCGGAAAATCGATGCTTTTC
TATAAAGCGCAACGATCAGGAATACTTCCTGACAACGATATCCCCTGGAG
ACGCAACTCTTTCGAAAATGACGGTCAAGGACAAGGTCATGATCTATCTG
GTGGTTACTTTGACGCTGGAGATTATGTCAAATTCAACTTCCCAATGGCT
GCAGCAACAACAGTGTTAGCTTGGGGTATGGTTGATTTTGCTGATGGATA
TAAGTTTGCTGGTAAATATGATGATGGATTGGCAACATTGAAATGGGCAA
CTGATTATTTCATTAAATGCCACACTGCCTGAAGCTACAACCGAAGCTCC
CGAAGTTACCACCGAAGTTTCTGAAGTTACCACCGAAGCTCCTGAAGTTA
CCACCGAAGCTCCCGAAGTTACCACCGAAGCTCCTGAAGCTACAACCGAT
GCTCCTGAAGCTACAACCGAAGCTCCCGAAGTTACCACCGAAGCTCCCGA
AGTTACCACCGAAGCTCCCGAAGTTACCACCGAAGCTCCTGAAGTTACCA
CCGAAGCTCCTGCAGTTACCACCGAAGCTCCTGAAGTTACCACTGAAGCT
CCAGAAGTCACCACAGAAGCTCCTGAAGTTACCACCAAAGCTCCCGAAGT
TACCACCGAAGCTCCTGAAGTGAGTACCACAGGATCGGAAGAAACCACTC
AAGCACAAACAACTGAAGCTGAGACATGCAGTACACCCCATGACTACAGT
GACCTACTCGGAAAATCGATGCTTTTCTATAAAGCGCAACGATCAGGAAT
ACTTCCTGACAACGATATCCCCTGGAGACGCAACTCTTTCGAAAATGACG
GTCAAGGACAAGGTCATGATCTATCTGGTGGTTACTTTGACGCTGGAGAT
TATGTCAAATTCAACTTCCCAATGGCTGCAGCAACAACAGTGTTAGCTTG
GGGTATGGTTGATTTTGCTGATGGATATAAGTTTGCTGGTAAATATGATG
ATGGATTGGCAACATTGAAATGGGCAACTGATTATTTCATTAAATGCCAC
ACTGCAACAAATGAATTATATGGCCAATGTGGTATCGGTAAAGATGACCA
TGAAGTCTGGGGGCGAGAAGATGAATATTACACAAACTCTGGTAAAGCTA
ACCCAAGACCATGCTACAAAGTCGATGCAAATAATCCAGGTTCTGATCTA
GCCGGTGAAACATCAGCTGCTCTGGCTGCTTCTTCCATTGCTTTTAAAGA
TTCGAACCCAGGTTATGCTACTACGCTTTTACAACATGCTAAAGAGTTGT
ACACATTTGCTAAAACCTTCAAAGGAGTTTATTCATCGAGTATCACAGAT
GCTCAATTCTTCTACAACTCCTTCAGTGGTTACAACGATGAATTAGCATG
GAGTGCTGCTTGGCTATACAAAGCTACCGACGAGGAAAAATATAGAACCG
ACGCTGAAGGGTTCTTCAATGAAATGCAACAAAACCCAGGTGAATTCTCC
TGGGACAACAAAGGTCGTGGTGTAGCAGCTCTCTTATCACAGCTCACTGG
GAAAGCAGTTTACAAACAAAACGTCGATAGCTTTTGCAACCAGATGCAGA
ACAACCAGCCGCGTAATCAATATGGATTGGTTTTCATCCAACAATGGGGA
TCAAATCGTCATGCAGCAAATGTCGCTTTCATTTGCCTCGCTCATTCAAA
AGCAACAGGTCAATTCAGCGCATTCGGACGCAATCAAATCAATAAACTCC
TTGGAGACGAATCAATCAATCAACGCAGTTTTGTCGTCGGTTATGGCTTA
AACCCGCCCAATCAACCTCATCATAGATCCTCTTCATGCCCGAACCGCCC
AGCACCATGTGGATGGAACGAGTTCAATATCAAGGCCCCAAATCCACATG
TTCTCACTGGGGCGTTAGTGGGCGGTGCTCGATCAACAACTGATGTATAT
CAAGATAGAAGGGATGATTTTATCGAAAATGAAATCACCCTTGATTATAA
TGCCGGCTTTCAATCTGCCCTTGCCGCCCTTCTTGAGCTTCAAAAAGAAG
GCGACTGCGGTCAAAAATTAACATTTTGACAACAAATGAATTATATGGCC
AATGTGGTATCGGTAAAGATGACCATGAAGTCTGGGGGCGAGAAGATGAA
TATTACACAAACTCTGGTAAAGCTAACCCAAGACCATGCTACAAAGTCGA
TGCAAATAATCCAGGTTCTGATCTAGCCGGTGAAACATCAGCTGCTCTGG
CTGCTTCTTCCATTGCTTTTAAAGATTCGAACCCAGGTTATGCTACTACG
CTTTTACAACATGCTAAAGAGTTGTACACATTTGCTAAAACCTTCAAAGG
AGTTTATTCATCGAGTATCACAGATGCTCAATTCTTCTACAACTCCTTCA
GTGGTTACAACGATGAATTAGCATGGAGTGCTGCTTGGCTATACAAAGCT
ACCGACGAGGAAAAATATAGAACCGACGCTGAAGGGTTCTTCAATGAAAT
GCAACAAAACCCAGGTGAATTCTCCTGGGACAACAAAGGTCGTGGTGTAG
CAGCTCTCTTATCACAGCTCACTGGGAAAGCAGTTTACAAACAAAACGTC
GATAGCTTTTGCAACCAGATGCAGAACAACCAGCCGCGTAATCAATATGG
ATTGGTTTTCATCCAACAATGGGGATCAAATCGTCATGCAGCAAATGTCG
CTTTCATTTGCCTCGCTCATTCAAAAGCAACAGGTCAATTCAGCGCATTC
GGACGCAATCAAATCAATAAACTCCTTGGAGACGAATCAATCAATCAACG
CAGTTTTGTCGTCGGTTATGGCTTAAACCCGCCCAATCAACCTCATCATA
GATCCTCTTCATGCCCGAACCGCCCAGCACCATGTGGATGGAACGAGTTC
AATATCAAGGCCCCAAATCCACATGTTCTCACTGGGGCGTTAGTGGGCGG
TGCTCGATCAACAACTGATGTATATCAAGATAGAAGGGATGATTTTATCG
AAAATGAAATCACCCTTGATTATAATGCCGGCTTTCAATCTGCCCTTGCC
GCCCTTCTTGAGCTTCAAAAAGAAGGCGACTGCGGTCAAAAATTAACATT
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000194_pilon | genome | sc0000194_pilon:378701..380870 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 730-1752:1024 |
| Aaloc | 1-726:2171 |
|
