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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000194_pilon:382205..387464- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035827 ID=XLOC_035827|Name=XLOC_035827|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5260bp|location=Sequence derived from alignment at sc0000194_pilon:382205..387464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGCGTTTAAACCAAAATGCAAATTATTCTTCATATTGCTGGTTGC
CATAGTTTCAATTTATGGAGCGCCAAAAAAACTGAAATCGCATTTCAATC
AACATCATGAGACGAAGCATGAGACGAAGCGCCAATTTCACAAAAATAAA
AATCTTGATCATATTATGAGTGACGAACTCTCAGGAACATCTTGCGATAG
TTTTATCGATTTAACAGCAGGTTGGAAAACAGGTCAAGATGGTTATTTTG
ACTTTACCGTCCCTCAAGAAGTGAATGGCTGGAAAATTACTGTAAGTAAT
GGTTGGTCGAATCTTAACTGTGCAATAGTCTAAGATAAATCAGTAACTAA
GAAATAAGCTCAAAGGTCAAGAAAATTCGCAAATGGTTTTTTTGCCGAAA
AGAGTTTACAGCCGGTAGGGTTTGCCAGTCTTCAACGAAACTCTCCCGCC
GGTTTTATCCGTTTACCGCCCTAACGGCTGTAAACTCTGTGCATAGAATA
TTTCCCGCCTTTAATAACATCGTCTAGGTCAAATCTCGAAAACTCGAATA
TTACTCTTGTTCGAAAATATAACATTCTTGGATATTAACTCATAATTCCA
TCAATCCATTATGGAATTATCCTGGCTATAGATGCTCTTCTTTTTTCCAC
AGGTGGAGTTTACAACTGCTACAAAGTTCTTCAAAATTTGGGACGCTAAA
AAGATGAGTGGTCCTGGACGACAATACATCTCCCAGAACTTTATATATAA
TAAAAAATTATCAGCAAACTCAATTTTTGAATATCGCTTCCAATATAAAT
TTAATGCTGGCTCAAATCCAAAAATTTCTTTTATCAAGTTTGAAAGTTCT
GATGGTGGATTTAGCATGTCTTGCGGTACATCCGATCCGTCAGTTACAGT
GCAACCCAAACCCACCCTTCCGCCCTTGGAAGGAGATTGTTCAGACTTCG
TTAAGATCAATAAGAAGAAATCAGGGAACGGTGTGGAGCAAGGAAGAATC
CGTTTTGCGTTGCCCGGTGATTTATATAAAAGATGGAAAATGAAGGTGAA
AAATTAACTTCTGAACTGAATTTCTTAATAGAGATTTTCGCGATTTTCGT
GAATTTGCTAAAATTTGCGAATTTAAATGGATGCGGTCGACTGTCTCTAA
TTCGAACTCAGATGGGGAATCTTTTTTGTTCAAATTATAAAAAATTCGAA
TAGTCGAGAGTCTACTGTATTCCTGATTCGCGCGAAATTGAATTCCCGCA
AAAAAAAGTACATTCAAATTTGCTAATCCTTTTTAGACGCCTGGTTACAA
AAAAATGTCTTGATGTCAGCTCATTTTGACGCTTCGATCAGATTTTTAGA
AATGGGTTTTATTTGTAATCCTTATTACAAATAATAGACAAGTAACCAGA
ACGGCCCTTGGCACAATATTAGCGAGTTTATGTATTCAAGATAAATCGAG
GGGAACGGTATAAAGCAAAGCTGACACGTCTCCAATAGACCGTCGTCTAT
TTAGGTGAGAAAATGCGATAAAGAGCCGTACATCAACTATCGACTTTGTT
TTGTACCGATTTCACTTACCCTCGATATCCTCCAATACATAAAATCGGTA
TTGATTATCCGTACTGATTGTTACAAGGCACTGTTTCTTCCAAAACGAAC
TTGAATTGATAAAGCGCTGATTCTTCAAAAAAAAAGGACACACAGCACCA
CGGACAGCAACATGCTAATAAAAGGGCCGATGCTGGGCCAAAAAAGTTCT
TTTTTTTGTCCTTTTATCTCTATGGAGGAATTAATTCGGTCAGAAAATAG
CTTGTCGTAACAAACTCCAGTCTCTAGAAATCCTAACGTATACTTTTTTG
ACACATTTCCTTTATCCATAGATTGGATTTGCAGAAACTATCGAAGGAAA
CTTTCAAGTACAAAAAAACGCAAATTCGATTGGAACAGATGCGCTGTGTT
CTGAAGCTACATTCTATAACTATGAACAAGCAAATGACAAAAATAGGTGA
TTCGAGCTTTGAAGTTCGAGCTATTTTGATTTTTTTTAATACGAATGTAG
TCCTCTATTTCCCACAGATCCGGTGGGATCGATTTTTCTGGTGGGAAAAA
CCCAATAATTTCAGCTCCACTGGGAAACTTCAGTAGCTTCAAATTATTTA
TAGGCCCAATTGTAGACCTCCAGATATTTACCCAAGGAACAATTGTGCCA
AATCTCAGCCAAATCCAACAATTTTTGAAGACTCCAGGCTGTCCCAAAGT
TTTAGCATCGTTTTGGTGAAAAACTCGTCCCCAGACGTCAAAAATCAAAA
TTTCCAAAAAATGAAAAACCACCTCCAGATATTCACCCAATGAACAAGCG
TGCCAAATCTCAGCCAAATCTAACAATTTTTGAAGTCCCCAGGCTGCCCC
AAAGTTTTGGGAATTTTTATTCCTGCTGTGTGAGATAGTTTGACCGGGGC
TTATTATTAAGCAGGGGTGTTTTAGATTTCGGCAGGCTAAAGTCTTTAAC
TAGAAAAGTAACTAACAATTTTTTCAGATTCGACTTGTTTTTGGAGGGTA
AAAAAAAGGACGAAGCAATGTTTTTATTTGAAAATAAGGGACTGGAAATT
TGTTATTCAAGTTGGTTTCAAGAATTATTTCTTCAAAATGGTGACCTGAC
GAGTTTTTACTATGGACTCAGCATCATCAAAATCATAAAAAAAGTATCAG
AAGTAGAGTCTAAGTCTAATAAGCTAATCAAAATATTCATATTTTTTAGA
TTTCGAGCTGGCAAAAATTTTATGTTCCCGTACATGACACATTACAACCG
AGAAGAAGAAAGTCCAACTATACAATATATTGAGATCAGCGATGATAAAG
GCAACTTGTACACGTGTGGCAACAAACCAACCTGTCCAACAACCACTCCA
GGTACAACCACCACACCTTCAGAACAAGAATCTACAACAACTGAGGTAAA
TACAATATACTGGTAGAATACACCTTTTTGACTGTAGCTGCCAATTGCCG
CGCGCGCATTTTTTGTCCGTTTTACCACCCTAAAACCGTCCCTAACTTTT
TTTCGCACCTAAAGATAATAAAAAAAATTGTAAAAGAAGCATTGGATCGA
GTTTAAGGTGGTGGTAAATTAAACAATAAAGTGGCACGCGCCTGACCACG
AGACTACGGTCGAAAAAAGGTGTATTGCCGTTTTAAGTTAGTCTATTTCA
TAAGATTCGTGCTTTTATTACATGATTTTTTCTACGTCAATGTGGTAATT
GATCTTAGTTGAGCAATCTTTTGCGAATAGAGACAAGTTTTACAAATATA
ACAACAAAAGAAAAGAGTTCATGAATTACCAAGTTAATTGAGTCCCGAAG
AAAAATTAAGTTTTTCAACGTCTTTACTTGAATGGAAATCTGGAAATACT
TGTCCATTTTTTCATTATAATCTGGACAGAAAATAACATGTAACAGATGC
ACGAATCCTATGAAATTACCGTTTTAAATGGAAAAAAAATTCCGAACAAT
TTGAGACTTGGTAATTAGGATAATGAAGTCCTGTTGATGCACAGGGAAAA
AGCTCCACAGTCCTTTATGCTAATTCTTTTAAAGCTAATTGGGTAGTATT
AATATCAGAACCCTTATATGGTGTCCTTGTGGTGATATACGAAGATATGA
AGAATCTCCCCCATTTCAGCCCTAAATGTTTTAGCCAAATCTATATTTAA
ATATTTCAGTTATTCTAAACACTGTGAGTTTATGAGTTTTGAAAGATTTT
ACGTCTTTTTATCCGGACATACTACATAGCATTGAAAAAGTATATTTCAA
TTTCTTCCAACCATTTGATTTCAACAGATCAAAACTACAACAGAGGAATT
AATCACCACAACTGAAGCGGCTCCACAACAACTGTCTGGAGACGATTGTT
CTGATTTCTTGAAATTTGAAGTTGGATATAATTATCAACAGGGTACATTC
AATTTCTTGGTACCACAACAAGCTGACGACTGGCAACTTCAGGTAGGTTA
ATTCACTCAGCGAAATAGAATAATCTAGATCATTTTAAAGGGACATAAAA
GTACTGATGAAATTTGTAAACAAACCGCATGCAGCAGGATACAAAATCAA
AACAAATGTCATTTTAAAGGGACATAAAAATAGTAAAATGTAAACATTGC
GCGAACCACGTGTCATTAAAGAGAACAATTAAAATCAAATGTCCAAAACA
AACTTGTAAAACAATTGAACAATCAAAATTAGCCATATTTGGTTAGATTT
TTTATTTTGACATGTGACATTTGTTTTGATTTTGTATCCGCTGCATACAG
TTTGTTTACAAATTTCGCATGTACTGTTATGTCCCTTTAATGTCGAAATA
AATTTTGATATTCAGGACCACACTGCACTTTGATAACAGCGAGTTTTTGT
TGTTTTAAAATGTTCGAGGTTTTCTAATCACACGATAAAATCGCCTTTCA
TGAGCACTATATAAGAATTCTCAAACAGGGACTGGATACAAGTTTTGAGA
TTATTTGAAGCGCAATCACTGGCCCGGTGGAATAACCTTAAAAGTGGAGG
GGCAAAAGGGATCTAAATGATATAGAATTTGCCATGAATTGGAGAAAAAA
GTCTACTTTGCTCAAAATTGGGGAGGCTTCAGTCTAAGCCTAAGCCTCCC
AATTTTCGCCGGGCCTGAATCATTACTGATTACTTGATTTGTTTCGAACG
TAAAATGGCCAATCTAAAGAACTCTCTATTTTGACGAAAACGGTTCTTTG
CATGGATTCTTTTCAAAACATCTAATGGTGTTTCAGATTTCTAAAATTCG
CGAGAATCGTAATAAAAATGACAAATCTCTTTGAAATCTAAATAGTAGAG
AAAAACAAAATCATTACCAGTGGAAGTGTACTCTGTACTATCCAGCTGGT
ACACAAGGCTGTTTCAACGTTCATTTAACGTTACATAGACGTTGTGAACG
TTAGATAAACGTTGAAACAACGTTGTGTCCCAGATGGGTAAAATGTATCT
CATGCAAAAATTAGCGGTACGGGAATGAATTTTGGTTTTTCCGTAGATAA
CGGATCTTTTTATAGACAAGAGGGTGCTAATGGTTCGATCCACGTGAAGT
AGCCAAATTACCAAAGAATTATTTTTCATATTAGGTTGGATTTACACCAT
CCACTCGACCAGAACGTCTTGATGTATATGGTACCAAAGCAATGCCAAAC
AACCCTGGCAAACAATGTCTCTACAAGTTTAAGAATGAAGATTATGATAA
ATATGCTGGT Coding sequence (CDS) from alignment at sc0000194_pilon:382205..387464- >XLOC_035827 ID=XLOC_035827|Name=XLOC_035827|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000194_pilon:382205..387464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGCGTTTAAACCAAAATGCAAATTATTCTTCATATTGCTGGTTGC
CATAGTTTCAATTTATGGAGCGCCAAAAAAACTGAAATCGCATTTCAATC
AACATCATGAGACGAAGCATGAGACGAAGCGCCAATTTCACAAAAATAAA
AATCTTGATCATATTATGAGTGACGAACTCTCAGGAACATCTTGCGATAG
TTTTATCGATTTAACAGCAGGTTGGAAAACAGGTCAAGATGGTTATTTTG
ACTTTACCGTCCCTCAAGAAGTGAATGGCTGGAAAATTACTATGGTTGCG
TTTAAACCAAAATGCAAATTATTCTTCATATTGCTGGTTGCCATAGTTTC
AATTTATGGAGCGCCAAAAAAACTGAAATCGCATTTCAATCAACATCATG
AGACGAAGCATGAGACGAAGCGCCAATTTCACAAAAATAAAAATCTTGAT
CATATTATGAGTGACGAACTCTCAGGAACATCTTGCGATAGTTTTATCGA
TTTAACAGCAGGTTGGAAAACAGGTCAAGATGGTTATTTTGACTTTACCG
TCCCTCAAGAAGTGAATGGCTGGAAAATTACTGTGGAGTTTACAACTGCT
ACAAAGTTCTTCAAAATTTGGGACGCTAAAAAGATGAGTGGTCCTGGACG
ACAATACATCTCCCAGAACTTTATATATAATAAAAAATTATCAGCAAACT
CAATTTTTGAATATCGCTTCCAATATAAATTTAATGCTGGCTCAAATCCA
AAAATTTCTTTTATCAAGTTTGAAAGTTCTGATGGTGGATTTAGCATGTC
TTGCGGTACATCCGATCCGTCAGTTACAGTGCAACCCAAACCCACCCTTC
CGCCCTTGGAAGGAGATTGTTCAGACTTCGTTAAGATCAATAAGAAGAAA
TCAGGGAACGGTGTGGAGCAAGGAAGAATCCGTTTTGCGTTGCCCGGTGA
TTTATATAAAAGATGGAAAATGAAGGTGGAGTTTACAACTGCTACAAAGT
TCTTCAAAATTTGGGACGCTAAAAAGATGAGTGGTCCTGGACGACAATAC
ATCTCCCAGAACTTTATATATAATAAAAAATTATCAGCAAACTCAATTTT
TGAATATCGCTTCCAATATAAATTTAATGCTGGCTCAAATCCAAAAATTT
CTTTTATCAAGTTTGAAAGTTCTGATGGTGGATTTAGCATGTCTTGCGGT
ACATCCGATCCGTCAGTTACAGTGCAACCCAAACCCACCCTTCCGCCCTT
GGAAGGAGATTGTTCAGACTTCGTTAAGATCAATAAGAAGAAATCAGGGA
ACGGTGTGGAGCAAGGAAGAATCCGTTTTGCGTTGCCCGGTGATTTATAT
AAAAGATGGAAAATGAAGATTGGATTTGCAGAAACTATCGAAGGAAACTT
TCAAGTACAAAAAAACGCAAATTCGATTGGAACAGATGCGCTGTGTTCTG
AAGCTACATTCTATAACTATGAACAAGCAAATGACAAAAATAGATTGGAT
TTGCAGAAACTATCGAAGGAAACTTTCAAGTACAAAAAAACGCAAATTCG
ATTGGAACAGATGCGCTGTGTTCTGAAGCTACATTCTATAACTATGAACA
AGCAAATGACAAAAATAGATTTCGAGCTGGCAAAAATTTTATGTTCCCGT
ACATGACACATTACAACCGAGAAGAAGAAAGTCCAACTATACAATATATT
GAGATCAGCGATGATAAAGGCAACTTGTACACGTGTGGCAACAAACCAAC
CTGTCCAACAACCACTCCAGGTACAACCACCACACCTTCAGAACAAGAAT
CTACAACAACTGAGATTTCGAGCTGGCAAAAATTTTATGTTCCCGTACAT
GACACATTACAACCGAGAAGAAGAAAGTCCAACTATACAATATATTGAGA
TCAGCGATGATAAAGGCAACTTGTACACGTGTGGCAACAAACCAACCTGT
CCAACAACCACTCCAGGTACAACCACCACACCTTCAGAACAAGAATCTAC
AACAACTGAGATCAAAACTACAACAGAGGAATTAATCACCACAACTGAAG
CGGCTCCACAACAACTGTCTGGAGACGATTGTTCTGATTTCTTGAAATTT
GAAGTTGGATATAATTATCAACAGGGTACATTCAATTTCTTGGTACCACA
ACAAGCTGACGACTGGCAACTTCAGATCAAAACTACAACAGAGGAATTAA
TCACCACAACTGAAGCGGCTCCACAACAACTGTCTGGAGACGATTGTTCT
GATTTCTTGAAATTTGAAGTTGGATATAATTATCAACAGGGTACATTCAA
TTTCTTGGTACCACAACAAGCTGACGACTGGCAACTTCAGGTTGGATTTA
CACCATCCACTCGACCAGAACGTCTTGATGTATATGGTACCAAAGCAATG
CCAAACAACCCTGGCAAACAATGTCTCTACAAGTTTAAGAATGAAGATTA
TGATAAATATGCTGGTGTTGGATTTACACCATCCACTCGACCAGAACGTC
TTGATGTATATGGTACCAAAGCAATGCCAAACAACCCTGGCAAACAATGT
CTCTACAAGTTTAAGAATGAAGATTATGATAAATATGCTGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000194_pilon | genome | sc0000194_pilon:382205..387464 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1171-1296:127 |
| Aaloc | 1006-1170:1434 |
| Aaloc | 811-1005:2511 |
| Aaloc | 685-807:3390 |
| Aaloc | 292-684:4609 |
| Aaloc | 1-291:5261 |
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