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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000194_pilon:550510..553914+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035823 ID=XLOC_035823|Name=XLOC_035823|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3405bp|location=Sequence derived from alignment at sc0000194_pilon:550510..553914+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACCCACTCTTCATTTTGACGGTTCAAGTGACGAAGTTACCATCAAAGC
GGTTTTCATCGACAAATCAATCCAAGAAGTACATTACAATATGCAGGGAG
TCCTTAAATGTGATGAAATGTTTCTCTATTGCGATTTAGCAATCATTGAA
TCAAATGTTGAATGTGTTGAGCTGATTGATGGGACATCCATTGAAGTGCG
TGGAAAATTGAAATGTGGAACTCCTGATGAAAGTTCTGTTGATAGCGAGG
GTGCCAAGATCTATGCAAAGCAATCGTTTATGCTCGATGGTAATTTCCAA
TGTTATGGAAGAGTGATGGTAGAAGCTGAGGAGATATTTGACCAGAAGAA
CACTGGACGAATTGAAATACTTGACTATCTGGAGCTAACAACTAGCGAAA
ATGGATCCATTCTTCTGGAAGGCTTAATAGTTGGGACAAAAGAAACTAGC
AAAGATACGTCATTAGACATTGCAGCTAAAACCATTAAGATATCTGGTAA
CATCGCTGATTTGAGTTCTTTAAAATTATCCAGTGAAAATGATTTGATAC
TTGCAAAGGAAAGTCGCATCCAATCTTGTCAATCTGTAGACATAAATGGT
GAATGGATCACTGTAGCTGGTTATATTGCTGATTTCCAAACCATTCAAAT
GACACCTTGGGGTCTACTGAATTCAGGAAGAATTGAATCTACCTTACCAG
ATTCTACGGTGAACTGTTCATCTCACCTGGCTCTGGTGAATAGTGGTAGT
TGTCAAAGTGAGGTTGGCATGTTAGAAGCACCATTCCTCCTCAGTCTTCC
AGGTAAAGAAATTAACAACGTCAATGAGATTAATAATTGTCAACTGGTTG
GACGCTCAAGCATTCAATTGGAGAGTATAACTTGTTTTCTTGGTGGCTCT
GCATTGAAATCAGAACGGCTTATCAAGAACCACTCTGTATTGCTCTTCAA
ATTTCTATCATTCGTCTCATCTACTCCTGACTCTAAAAGCCTGGAAGCAT
GGACAAAAGCAGCTGACTCATTGAGACAAATACAATCTGATTACAAAGAT
CGAAACAATCGTGAAGATGGTCTGTTTGCACTGTTAAAGAGTCTCTTAAC
TGGATCATCCAATACATCTATTGATCTACGACTTGCTGAGATGTATAATA
TGGTCAATATCTTTGTTGGTGATATTCTTCAAAATGGAATCGAGTCTTTT
GATGTACCAAGACTAGTTTTCATCATCACCAGTGAAAGTGAGAGATACAC
CAGGGTCAATATTTTGAAGGAGAAGCTGTTAGCCATCCCTGAAAAAGCCA
GAAAACTTCGACAAGAAATGAAAAAGCGAGGGAtcaaaagttatcaatca
atcatgAGTCGATTTGGTTTTAACGAAGTAAAGAGAAGCAATGCAACTGA
AGGTATTGCTGAATCTGGAATGTATTCTTTTGGTGAAGGTGCAATGGTTA
CTGATTACCAGTTTATTGCAATGTTTGATGAGCTGTTCTGTGATGAAGGT
TTTGTATCTGCTGGTGATGTGATGGTCAGCTCTAAAGAGATTTTGATGAG
CAAAAGACAAAAGAATGTGATTGCCATGCGACTTTTTGCAGACCAGTCTA
TCAGTGCTGGTGATATTGATGCTGACACCGTCCTAATAAAATCTGGCAAT
AAAGCAAAGTTAACTGGTAAAGTGAAAGCAAAAGATGCATTGATTGATGC
TGAAGGTGATATTGATATGCGTTACAAGAAAAAAGGTAAATGGACCAAAA
CTGCCAATCATGAGTTCAAGAAGTTATCTATCAAAACTAAAAAGATCAAT
CAAGCAAATGACTTGCTGGCAACAGAGGGAATCTAccaagatttgaaaat
ttcagatcagtTAAATCTTGCAGTTTCCGATCAAGACATTGTATTGTCAC
GATGTAACATTGAACAATCTTTCCAGTTGAATCTTCAAGCTAAATCGGTG
AAAATCGACAAATCAAACGTGAATTATGCTAAAGGCCTTGCCatcgaatc
tgaaaatcaaATGAGTGTGAAAGAATCAAGCATTGGTTCATCTGAAGCTT
CAACAGTTTTAAAAACCAAGACCGGAGATATGAGATTAGATTCATCTTCA
GTGGAAGCCAAAAAGAACGTTGCAGTAGTGGCTAAGGAAGGTTCAATTCA
GATGACTGGTGGATCTGTATCTGGCGACAAAGGTGTCCTGGTGAAAGCGA
AAAAGGATGTGAAAATCGATCCTATAGAAACCAAACATGATAGCTCTTCA
TCAAAGTCAGGTTTCTTTACTTCAAAGGCATCCTCAACTTCGTATTCAAC
TGTTGAGAAAGCACATATCAAATCTAAAGATGGCAATATTGGTGTCGTTG
CCGAAGAAGGAGAAATTAATATGACAGCAACTGAATTAGATGCTGGACAA
GATATCAATATGTATGCCAAGAAAGATGTTGTTGTTAGCGATAAAGTGAC
GACTCGAACTGAAACACATGTTaaaaaaaCGTGGTTTACAACACGACGTA
ggacaacaacaaaacaagaaTCACACAAATCTCGAATCAAAGCTCGTGGT
AATCTTTTTGTCAAATCTGACAAAGGCAGTATCATAGGAATTGGTACTGA
TTACAAAGTTGGAGGAGATATGTATTTACATGCTGCTGAAGATGTGACTT
TGAGAGATCGTATCCTGAATAGTTCTAAAGAATCAAGCTCAAGCGGGATA
TCGCTTTCTCTTGATAAAGGATTGTCATTTGGTTCTGAGGAAACTAGATC
GACCAGACAAACCTTGGCAGAAAACCGAGCAGACATCAATGGAAATCTAA
TCGTTTCTGCTAAAAATTTCAATGTTCAAAATGCAATGGGAATTGATGCT
GAGAATATGTCCATTGATGCCCAGAATGTCAATTTTGAAGGTGCAGATTT
GCACAATACAAGTTACATGAACAAATGGTCTTTTGGCATCAATTTGAATC
AACTGGATTTAACAGGAGGAGAAAGTCGTTCAAAGGAAAAGAATGTTGTC
AACCAGAATATTAATATCCGTGGTAAAACCCATTTAGAAAATGTTGAAAA
CGTCAACCTTATAGCCAGTAATTTAAACACTACCGACATCTCTGGTCAAG
TGAAGAATCTGAatgtaatttcaaaacaaagtgaaaTCGACGCGCAATCA
AGCTCGTTTAATTTTGGATGTGCAATCGTTGATGGAGTACCTGTACCAAA
CAAGTTTGGAATGAGCAATACTTCAGATACTGGAAAGTTTGTGGAGCAGA
CCAGTGGCATCCACTGCAACAATTCTATCAAAGATTTAAAAGTTGATAAT
CTAAAGTTGAAAGGGTCTTCAATTACCTCTAATGGTGATGTTGGAAACTT
CGCCAAGAACATTATTTCAGAgaagatcaaaagttatagatcaCAAACAT
CGTTT Coding sequence (CDS) from alignment at sc0000194_pilon:550510..553914+ >XLOC_035823 ID=XLOC_035823|Name=XLOC_035823|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6810bp|location=Sequence derived from alignment at sc0000194_pilon:550510..553914+ (Clytia hemisphaerica_ch_hm2_pilon)
AAACCCACTCTTCATTTTGACGGTTCAAGTGACGAAGTTACCATCAAAGC
GGTTTTCATCGACAAATCAATCCAAGAAGTACATTACAATATGCAGGGAG
TCCTTAAATGTGATGAAATGTTTCTCTATTGCGATTTAGCAATCATTGAA
TCAAATGTTGAATGTGTTGAGCTGATTGATGGGACATCCATTGAAGTGCG
TGGAAAATTGAAATGTGGAACTCCTGATGAAAGTTCTGTTGATAGCGAGG
GTGCCAAGATCTATGCAAAGCAATCGTTTATGCTCGATGGTAATTTCCAA
TGTTATGGAAGAGTGATGGTAGAAGCTGAGGAGATATTTGACCAGAAGAA
CACTGGACGAATTGAAATACTTGACTATCTGGAGCTAACAACTAGCGAAA
ATGGATCCATTCTTCTGGAAGGCTTAATAGTTGGGACAAAAGAAACTAGC
AAAGATACGTCATTAGACATTGCAGCTAAAACCATTAAGATATCTGGTAA
CATCGCTGATTTGAGTTCTTTAAAATTATCCAGTGAAAATGATTTGATAC
TTGCAAAGGAAAGTCGCATCCAATCTTGTCAATCTGTAGACATAAATGGT
GAATGGATCACTGTAGCTGGTTATATTGCTGATTTCCAAACCATTCAAAT
GACACCTTGGGGTCTACTGAATTCAGGAAGAATTGAATCTACCTTACCAG
ATTCTACGGTGAACTGTTCATCTCACCTGGCTCTGGTGAATAGTGGTAGT
TGTCAAAGTGAGGTTGGCATGTTAGAAGCACCATTCCTCCTCAGTCTTCC
AGGTAAAGAAATTAACAACGTCAATGAGATTAATAATTGTCAACTGGTTG
GACGCTCAAGCATTCAATTGGAGAGTATAACTTGTTTTCTTGGTGGCTCT
GCATTGAAATCAGAACGGCTTATCAAGAACCACTCTGTATTGCTCTTCAA
ATTTCTATCATTCGTCTCATCTACTCCTGACTCTAAAAGCCTGGAAGCAT
GGACAAAAGCAGCTGACTCATTGAGACAAATACAATCTGATTACAAAGAT
CGAAACAATCGTGAAGATGGTCTGTTTGCACTGTTAAAGAGTCTCTTAAC
TGGATCATCCAATACATCTATTGATCTACGACTTGCTGAGATGTATAATA
TGGTCAATATCTTTGTTGGTGATATTCTTCAAAATGGAATCGAGTCTTTT
GATGTACCAAGACTAGTTTTCATCATCACCAGTGAAAGTGAGAGATACAC
CAGGGTCAATATTTTGAAGGAGAAGCTGTTAGCCATCCCTGAAAAAGCCA
GAAAACTTCGACAAGAAATGAAAAAGCGAGGGAtcaaaagttatcaatca
atcatgAGTCGATTTGGTTTTAACGAAGTAAAGAGAAGCAATGCAACTGA
AGGTATTGCTGAATCTGGAATGTATTCTTTTGGTGAAGGTGCAATGGTTA
CTGATTACCAGTTTATTGCAATGTTTGATGAGCTGTTCTGTGATGAAGGT
TTTGTATCTGCTGGTGATGTGATGGTCAGCTCTAAAGAGATTTTGATGAG
CAAAAGACAAAAGAATGTGATTGCCATGCGACTTTTTGCAGACCAGTCTA
TCAGTGCTGGTGATATTGATGCTGACACCGTCCTAATAAAATCTGGCAAT
AAAGCAAAGTTAACTGGTAAAGTGAAAGCAAAAGATGCATTGATTGATGC
TGAAGGTGATATTGATATGCGTTACAAGAAAAAAGGTAAATGGACCAAAA
CTGCCAATCATGAGTTCAAGAAGTTATCTATCAAAACTAAAAAGATCAAT
CAAGCAAATGACTTGCTGGCAACAGAGGGAATCTAccaagatttgaaaat
ttcagatcagtTAAATCTTGCAGTTTCCGATCAAGACATTGTATTGTCAC
GATGTAACATTGAACAATCTTTCCAGTTGAATCTTCAAGCTAAATCGGTG
AAAATCGACAAATCAAACGTGAATTATGCTAAAGGCCTTGCCatcgaatc
tgaaaatcaaATGAGTGTGAAAGAATCAAGCATTGGTTCATCTGAAGCTT
CAACAGTTTTAAAAACCAAGACCGGAGATATGAGATTAGATTCATCTTCA
GTGGAAGCCAAAAAGAACGTTGCAGTAGTGGCTAAGGAAGGTTCAATTCA
GATGACTGGTGGATCTGTATCTGGCGACAAAGGTGTCCTGGTGAAAGCGA
AAAAGGATGTGAAAATCGATCCTATAGAAACCAAACATGATAGCTCTTCA
TCAAAGTCAGGTTTCTTTACTTCAAAGGCATCCTCAACTTCGTATTCAAC
TGTTGAGAAAGCACATATCAAATCTAAAGATGGCAATATTGGTGTCGTTG
CCGAAGAAGGAGAAATTAATATGACAGCAACTGAATTAGATGCTGGACAA
GATATCAATATGTATGCCAAGAAAGATGTTGTTGTTAGCGATAAAGTGAC
GACTCGAACTGAAACACATGTTaaaaaaaCGTGGTTTACAACACGACGTA
ggacaacaacaaaacaagaaTCACACAAATCTCGAATCAAAGCTCGTGGT
AATCTTTTTGTCAAATCTGACAAAGGCAGTATCATAGGAATTGGTACTGA
TTACAAAGTTGGAGGAGATATGTATTTACATGCTGCTGAAGATGTGACTT
TGAGAGATCGTATCCTGAATAGTTCTAAAGAATCAAGCTCAAGCGGGATA
TCGCTTTCTCTTGATAAAGGATTGTCATTTGGTTCTGAGGAAACTAGATC
GACCAGACAAACCTTGGCAGAAAACCGAGCAGACATCAATGGAAATCTAA
TCGTTTCTGCTAAAAATTTCAATGTTCAAAATGCAATGGGAATTGATGCT
GAGAATATGTCCATTGATGCCCAGAATGTCAATTTTGAAGGTGCAGATTT
GCACAATACAAGTTACATGAACAAATGGTCTTTTGGCATCAATTTGAATC
AACTGGATTTAACAGGAGGAGAAAGTCGTTCAAAGGAAAAGAATGTTGTC
AACCAGAATATTAATATCCGTGGTAAAACCCATTTAGAAAATGTTGAAAA
CGTCAACCTTATAGCCAGTAATTTAAACACTACCGACATCTCTGGTCAAG
TGAAGAATCTGAatgtaatttcaaaacaaagtgaaaTCGACGCGCAATCA
AGCTCGTTTAATTTTGGATGTGCAATCGTTGATGGAGTACCTGTACCAAA
CAAGTTTGGAATGAGCAATACTTCAGATACTGGAAAGTTTGTGGAGCAGA
CCAGTGGCATCCACTGCAACAATTCTATCAAAGATTTAAAAGTTGATAAT
CTAAAGTTGAAAGGGTCTTCAATTACCTCTAATGGTGATGTTGGAAACTT
CGCCAAGAACATTATTTCAGAgaagatcaaaagttatagatcaCAAACAT
CGTTTAAACCCACTCTTCATTTTGACGGTTCAAGTGACGAAGTTACCATC
AAAGCGGTTTTCATCGACAAATCAATCCAAGAAGTACATTACAATATGCA
GGGAGTCCTTAAATGTGATGAAATGTTTCTCTATTGCGATTTAGCAATCA
TTGAATCAAATGTTGAATGTGTTGAGCTGATTGATGGGACATCCATTGAA
GTGCGTGGAAAATTGAAATGTGGAACTCCTGATGAAAGTTCTGTTGATAG
CGAGGGTGCCAAGATCTATGCAAAGCAATCGTTTATGCTCGATGGTAATT
TCCAATGTTATGGAAGAGTGATGGTAGAAGCTGAGGAGATATTTGACCAG
AAGAACACTGGACGAATTGAAATACTTGACTATCTGGAGCTAACAACTAG
CGAAAATGGATCCATTCTTCTGGAAGGCTTAATAGTTGGGACAAAAGAAA
CTAGCAAAGATACGTCATTAGACATTGCAGCTAAAACCATTAAGATATCT
GGTAACATCGCTGATTTGAGTTCTTTAAAATTATCCAGTGAAAATGATTT
GATACTTGCAAAGGAAAGTCGCATCCAATCTTGTCAATCTGTAGACATAA
ATGGTGAATGGATCACTGTAGCTGGTTATATTGCTGATTTCCAAACCATT
CAAATGACACCTTGGGGTCTACTGAATTCAGGAAGAATTGAATCTACCTT
ACCAGATTCTACGGTGAACTGTTCATCTCACCTGGCTCTGGTGAATAGTG
GTAGTTGTCAAAGTGAGGTTGGCATGTTAGAAGCACCATTCCTCCTCAGT
CTTCCAGGTAAAGAAATTAACAACGTCAATGAGATTAATAATTGTCAACT
GGTTGGACGCTCAAGCATTCAATTGGAGAGTATAACTTGTTTTCTTGGTG
GCTCTGCATTGAAATCAGAACGGCTTATCAAGAACCACTCTGTATTGCTC
TTCAAATTTCTATCATTCGTCTCATCTACTCCTGACTCTAAAAGCCTGGA
AGCATGGACAAAAGCAGCTGACTCATTGAGACAAATACAATCTGATTACA
AAGATCGAAACAATCGTGAAGATGGTCTGTTTGCACTGTTAAAGAGTCTC
TTAACTGGATCATCCAATACATCTATTGATCTACGACTTGCTGAGATGTA
TAATATGGTCAATATCTTTGTTGGTGATATTCTTCAAAATGGAATCGAGT
CTTTTGATGTACCAAGACTAGTTTTCATCATCACCAGTGAAAGTGAGAGA
TACACCAGGGTCAATATTTTGAAGGAGAAGCTGTTAGCCATCCCTGAAAA
AGCCAGAAAACTTCGACAAGAAATGAAAAAGCGAGGGAtcaaaagttatc
aatcaatcatgAGTCGATTTGGTTTTAACGAAGTAAAGAGAAGCAATGCA
ACTGAAGGTATTGCTGAATCTGGAATGTATTCTTTTGGTGAAGGTGCAAT
GGTTACTGATTACCAGTTTATTGCAATGTTTGATGAGCTGTTCTGTGATG
AAGGTTTTGTATCTGCTGGTGATGTGATGGTCAGCTCTAAAGAGATTTTG
ATGAGCAAAAGACAAAAGAATGTGATTGCCATGCGACTTTTTGCAGACCA
GTCTATCAGTGCTGGTGATATTGATGCTGACACCGTCCTAATAAAATCTG
GCAATAAAGCAAAGTTAACTGGTAAAGTGAAAGCAAAAGATGCATTGATT
GATGCTGAAGGTGATATTGATATGCGTTACAAGAAAAAAGGTAAATGGAC
CAAAACTGCCAATCATGAGTTCAAGAAGTTATCTATCAAAACTAAAAAGA
TCAATCAAGCAAATGACTTGCTGGCAACAGAGGGAATCTAccaagatttg
aaaatttcagatcagtTAAATCTTGCAGTTTCCGATCAAGACATTGTATT
GTCACGATGTAACATTGAACAATCTTTCCAGTTGAATCTTCAAGCTAAAT
CGGTGAAAATCGACAAATCAAACGTGAATTATGCTAAAGGCCTTGCCatc
gaatctgaaaatcaaATGAGTGTGAAAGAATCAAGCATTGGTTCATCTGA
AGCTTCAACAGTTTTAAAAACCAAGACCGGAGATATGAGATTAGATTCAT
CTTCAGTGGAAGCCAAAAAGAACGTTGCAGTAGTGGCTAAGGAAGGTTCA
ATTCAGATGACTGGTGGATCTGTATCTGGCGACAAAGGTGTCCTGGTGAA
AGCGAAAAAGGATGTGAAAATCGATCCTATAGAAACCAAACATGATAGCT
CTTCATCAAAGTCAGGTTTCTTTACTTCAAAGGCATCCTCAACTTCGTAT
TCAACTGTTGAGAAAGCACATATCAAATCTAAAGATGGCAATATTGGTGT
CGTTGCCGAAGAAGGAGAAATTAATATGACAGCAACTGAATTAGATGCTG
GACAAGATATCAATATGTATGCCAAGAAAGATGTTGTTGTTAGCGATAAA
GTGACGACTCGAACTGAAACACATGTTaaaaaaaCGTGGTTTACAACACG
ACGTAggacaacaacaaaacaagaaTCACACAAATCTCGAATCAAAGCTC
GTGGTAATCTTTTTGTCAAATCTGACAAAGGCAGTATCATAGGAATTGGT
ACTGATTACAAAGTTGGAGGAGATATGTATTTACATGCTGCTGAAGATGT
GACTTTGAGAGATCGTATCCTGAATAGTTCTAAAGAATCAAGCTCAAGCG
GGATATCGCTTTCTCTTGATAAAGGATTGTCATTTGGTTCTGAGGAAACT
AGATCGACCAGACAAACCTTGGCAGAAAACCGAGCAGACATCAATGGAAA
TCTAATCGTTTCTGCTAAAAATTTCAATGTTCAAAATGCAATGGGAATTG
ATGCTGAGAATATGTCCATTGATGCCCAGAATGTCAATTTTGAAGGTGCA
GATTTGCACAATACAAGTTACATGAACAAATGGTCTTTTGGCATCAATTT
GAATCAACTGGATTTAACAGGAGGAGAAAGTCGTTCAAAGGAAAAGAATG
TTGTCAACCAGAATATTAATATCCGTGGTAAAACCCATTTAGAAAATGTT
GAAAACGTCAACCTTATAGCCAGTAATTTAAACACTACCGACATCTCTGG
TCAAGTGAAGAATCTGAatgtaatttcaaaacaaagtgaaaTCGACGCGC
AATCAAGCTCGTTTAATTTTGGATGTGCAATCGTTGATGGAGTACCTGTA
CCAAACAAGTTTGGAATGAGCAATACTTCAGATACTGGAAAGTTTGTGGA
GCAGACCAGTGGCATCCACTGCAACAATTCTATCAAAGATTTAAAAGTTG
ATAATCTAAAGTTGAAAGGGTCTTCAATTACCTCTAATGGTGATGTTGGA
AACTTCGCCAAGAACATTATTTCAGAgaagatcaaaagttatagatcaCA
AACATCGTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000194_pilon | genome | sc0000194_pilon:550510..553914 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-3405:1 |
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