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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:783841..788206+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035812 ID=XLOC_035812|Name=XLOC_035812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4366bp|location=Sequence derived from alignment at sc0000145_pilon:783841..788206+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAGACAAAGTATTTGTAAGTaatctatttgtttttttttattta
aatcaattttcttcttttctataatttttATAAACCCACTAATAGAGTTA
ATTTTTCCCGGTGTCACAGGAAATAAGTACTCCCGAAAAAAGTACTCCCG
GGAGTACGTTTTTCCTAGGAAATTGTTCAAAGGGCTGAAAAGGAATCTTC
AACCCTTAATATCAATATATGTAATACAAATAGATCactatttacaaatt
taattttagtaTGATACTAGCCCACCTAGTATCGCTTTCACGTGGACAAG
ATACATGCCCGAAAACAAATTGTAAGAAAACCATTGGTACCAATGATATT
CACCTTACTTCCTTTACCAAAACTGCCCACAAAAAATTCACATTCTGGCC
ACCTAGTAAAACTGTTGGTGGCGTATCAGGAACAAAAGAAGATCGTGAAC
GACGATGTGCAGAACAGTGCTCCAAACAAGGGATATCCGTATGTAAAACA
GCTCATTTAAGCCCGTATACAGCGCCACCTTCGACATGTTACTTGTTTGC
TGAGGATGCCTACAACCACACGGAAAGTGTCACAAGCACTGTTAGTAGCT
GGACTACGTTTCACGTCAAGGTACTGATTTTTTCCAATAATCATACAGAG
attaatatctatttttaaatcTTCTTCAATTCATTCTTTGTTGCCTGTTG
TACTTGTTTAAGTTTCAGTATTTCCCTTCGTGGAAAGAATTCTCcagctg
cctaaaagcttttgaatttttcggggcatgccacttaaaacatatgttat
tattatttttgataaCGTTCATAAGAAATTGGCCATTTTAGAGTCTGTAA
AGCTTTAaaatcttcttaattttttcttaacattttggccattaaagcct
tatgttcttataaagtttgttctttataaaaaaacttgtacactttttta
CAAAAGGAACATGTTTacaaggaacttgaggctgaaaatggtccgaaaAT
TAAGGAATTactaaggaactgctcaggctgagaattaGAAAACAAGTTAA
GGAACAGAGACTTAAAAATGAACTTGTAcacattttaaaaaaaaactaaa
caaaaaaattaaaaaattaaaaaataatgttcGTCTTTTGTCAATTGTTC
AACAAATCATCAAATCAGTCCAActaagtaaataaggaactcgacaagga
actttgaggctgaaaataaggaactccaggcttggAGCCATGTTAagatt
ctttataaaaaaacgtgtactttccTGGTTCTAGCACATTGtagcagttt
ttttttcttgaaaatttgccGAAAAATAGTCCtcgctaaaattcaaaaaa
aaataaactccCGGCATAAAAGTTTTTCGTATTGTTCTAAATTAACCCTT
AATTACCTATTACTCATTTTTAGGCAAGAAAATCAATTTACCCTGCAATT
tgcaaaaataaggaaaatgattcctcgggaatttttttgtttaggaTTTT
TGGTGCTCTATCTAACATTTTACCAGGGATATGTAATAGCgaagctggat
gaaggacgagaattccttagcggattacttctttgtcttttctattataa
actgttcataatagaaatccatctctgtacccttgagtgttctgttttta
taagaaaaataaagcagacaaagtattcatgcacattttttgctatgatg
ttcccacttttcatcaaaataatatttccaGAAAATACCcgaaaagcttc
cttgtaaatgaaatctaattttatcagcgtgtgttatgaatttgagaagc
tttcatgattccTCTTTAGAAATGTCGGATGtagatattttgacaaatat
caTAGGCGTAGCGTGATACCATGCAAAATTTATgaatgagagcggttttt
acgacactgtaattattatttttgttttatcaaaagataatgaatatgtc
ataaacttCTGCACTCCTGCATAAATTTACAGGGTATCTTGCTACGCCTA
AGAATATTGTTTCAatcgacttgaaattttttccataatcagacataccg
actcgCTACCTGAAAATACCAGTTAGAAAGTGAAGCACCCTGCGGTGTAG
CgtggtatttcaaatgaatagGTGCTATctataatcttacagaagaaatt
ttttataactttagtaatgaaaacaatatttttcattttttcaaattgtc
attcaccaatgttttacagaccctcttgataattaaaagtttttaatcgc
gaaggataaatgcagcagcagcaGAATcgttggctaagaggaaatccaaa
tttcacgagtttgtaatttaAGAAGTCCagtttcatatcaaattttaatg
tcagggtacagagatagaacaagactttttcaaatgtgcgttatccagct
tcGCTATTACATTATCCCTGATtttaccatggaggtataaagaaaaacag
gagtttatctgtcgttgaaatctttttatttcttttataaaatgtttcaa
aagaaattctaggctcgcccgatgaaataagacttaaTTAGAGCTCAAGT
TTGTTCTGAACATTCTAAccatcagtattgaagattatAGCCTcttctaa
tatacgaaaattaaataaaacttagccccacaaaacaagtttatgttcca
tttcgttacCCGTTCAACTTTGtttcgaaaatatattttcttaagCTAGA
AAATGGAAAGTTATTTATAaacacacacgatttcagaataattttttgac
aaaaagtcgccggagaattttggaggagaATATCAAGCAATTGAGTTCAT
ATTGAAGAAAACATTaattgaaaaatcttgtcatttgatgaaggattgcc
aagtttacaagTCTTTTTCAATCCAAATATTTTCCTACACTGATGTCATA
AACAATGACatttcatctaatttctaaaactGAAATAAGCCAATATGATT
CCACCAATggacaaaagagctcattaaaaatgcacgatatgaGAGATTAT
GATCATGCAAACCTCGTagcttttttaatcgtagggcgagcttataattc
ttgatatgcgtaagtcatttttctagcggaaacacccgaaaaaatccgga
atttgacccctctctgttactaaaaatagaaacaccgAGGTCAAAATCGG
GCTTTTTTCGaatgcttccgttaaaaaatatgacttCATCTTGAAATATG
CATATCAAGAATTGGTTATAATaacatacttctcctgtttttctttgtaC
CTCCATGATTTTACATTGTTTCAGAATTCGTTTTGTGAAAGCTTTCCGTG
CAACACTGGAGTATGTCAACCAGACTTCGAATTGGATCGTGGACATTGTA
AATGTTCTGGTTATTCTGGAGAGTTCTGCCAAACACTAGGTAAGTTAACc
taccccagctggcacacaacgttgtttcagcgtttatctaacgttcacaa
catctATATAAtgctagatgaacgttgaaacaacgttgtgtgccagctgg
gtgtaCCAGCAGGCAAAATACAGaataatgttttccaaaaaaaggaaatc
taacctgataacagatcgTGTGGAGCTTTTCCTTAACGCAACACGCTGCA
GTTCTAAAGATCGATGAGAACTACGGTATAATCATAATTTCGCCCACGTT
AGTCTTTAGAGCTGTACTGGGAAATATGcaatctaaagtctgtctcaaaa
taatttgcagctgagacaaaaatgataatcactgcgaaaaaagttttcaa
aaatattcattcaatcaaaagatatcaaacaaaaatcaTTGCTGGCTGAC
TCTATagagtagtaaaaaacgacaaaaaaacagcctattattgatgttga
tttttttcttcttcatttttcattttcatttttttttatttttccaattt
ttttgcttgataatattccactcacaaatatcttttcaacaagcataaAA
TCAcaacttaattcaaattctatctaAAGTTACAACCATTTTTGTCTcac
tcagctgcaaattattttgagacaagtTAAAAAGGTCAtgtttgattttt
gaataaaaaaaattaaattttttttagaataagtACCATGTCTGTTACTG
AGACAGAGGTGTTAATAACAGCTTCTATATAATCCTTAGACCCATTGAAC
ACAGAGGACGTTGGTCATTGGACTTTTGATTCTGGCTACATGGAAAATGT
TGGGACTGGGGCAAGCAACCTTGGTGACGGTACCATGACAACTGGTGTCA
TTGTGGAAACATTGGAGCGTTCTACCAAAGTCATGCATTGTAAAGGTGGC
GGCTCTGGttatgaaaattgtttttcaatcTTTCCTGATTTCTCAAAGGG
TTGTTGGTCATCGtaa Coding sequence (CDS) from alignment at sc0000145_pilon:783841..788206+ >XLOC_035812 ID=XLOC_035812|Name=XLOC_035812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1446bp|location=Sequence derived from alignment at sc0000145_pilon:783841..788206+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAGACAAAGTATTTATGTCAAAGACAAAGTATTTtaTGATACTA
GCCCACCTAGTATCGCTTTCACGTGGACAAGATACATGCCCGAAAACAAA
TTGTAAGAAAACCATTGGTACCAATGATATTCACCTTACTTCCTTTACCA
AAACTGCCCACAAAAAATTCACATTCTGGCCACCTAGTAAAACTGTTGGT
GGCGTATCAGGAACAAAAGAAGATCGTGAACGACGATGTGCAGAACAGTG
CTCCAAACAAGGGATATCCGTATGTAAAACAGCTCATTTAAGCCCGTATA
CAGCGCCACCTTCGACATGTTACTTGTTTGCTGAGGATGCCTACAACCAC
ACGGAAAGTGTCACAAGCACTGTTAGTAGCTGGACTACGTTTCACGTCAA
GtaTGATACTAGCCCACCTAGTATCGCTTTCACGTGGACAAGATACATGC
CCGAAAACAAATTGTAAGAAAACCATTGGTACCAATGATATTCACCTTAC
TTCCTTTACCAAAACTGCCCACAAAAAATTCACATTCTGGCCACCTAGTA
AAACTGTTGGTGGCGTATCAGGAACAAAAGAAGATCGTGAACGACGATGT
GCAGAACAGTGCTCCAAACAAGGGATATCCGTATGTAAAACAGCTCATTT
AAGCCCGTATACAGCGCCACCTTCGACATGTTACTTGTTTGCTGAGGATG
CCTACAACCACACGGAAAGTGTCACAAGCACTGTTAGTAGCTGGACTACG
TTTCACGTCAAGAATTCGTTTTGTGAAAGCTTTCCGTGCAACACTGGAGT
ATGTCAACCAGACTTCGAATTGGATCGTGGACATTGTAAATGTTCTGGTT
ATTCTGGAGAGTTCTGCCAAACACTAGAATTCGTTTTGTGAAAGCTTTCC
GTGCAACACTGGAGTATGTCAACCAGACTTCGAATTGGATCGTGGACATT
GTAAATGTTCTGGTTATTCTGGAGAGTTCTGCCAAACACTAGACCCATTG
AACACAGAGGACGTTGGTCATTGGACTTTTGATTCTGGCTACATGGAAAA
TGTTGGGACTGGGGCAAGCAACCTTGGTGACGGTACCATGACAACTGGTG
TCATTGTGGAAACATTGGAGCGTTCTACCAAAGTCATGCATTGTAAAGGT
GGCGGCTCTGGttatgaaaattgtttttcaatcTTTCCTGATTTCTCAAA
GGGTTGTTGGTCATCGtaaACCCATTGAACACAGAGGACGTTGGTCATTG
GACTTTTGATTCTGGCTACATGGAAAATGTTGGGACTGGGGCAAGCAACC
TTGGTGACGGTACCATGACAACTGGTGTCATTGTGGAAACATTGGAGCGT
TCTACCAAAGTCATGCATTGTAAAGGTGGCGGCTCTGGttatgaaaattg
tttttcaatcTTTCCTGATTTCTCAAAGGGTTGTTGGTCATCGtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:783841..788206 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 499-723:4142 |
| Aaloc | 382-495:3275 |
| Aaloc | 22-381:261 |
| Aaloc | 1-18:1 |
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