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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:742052..746971+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035807 ID=XLOC_035807|Name=XLOC_035807|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4920bp|location=Sequence derived from alignment at sc0000145_pilon:742052..746971+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaacagttttgtttcttttattttacttaTTGTTTGGATTGACTT
TGGAAATTGCGATCTGAAAGGTCATTTGGAGCCTTTAGGTCAACAAAGAG
AATCAGAAGGCCATATTGAAGTTAGGGAAGATGTACCAGATGTGATTACA
TTCCATAAAGATTACGTTGTTGGAAGTAAACCAGTTGTCTTCAAAGGTGC
TGGTACAAATCTACCAGCTTTTCATTTATGGACAGATGAGTACATGATGT
GAGTATAAAGAGgatgcttttttttttattcattcttgATGGTGACGAGT
GATAATCTATTTgtgaaaatgctttaaaaacatGACTTCTCACGTATTTA
TGATGAGATCAAACTATATAGTAATAACCTAAGACTTTGATTGCCTatat
atcaagaacaagttaagaatatttcaaggtttCACGGATGCTAAAACAct
tgatttcttaggaaaaaggacaaaaacactcgaaaaatggtgataataag
aacatttttaggcttaaaactcggaaagttaagaacaccaaaaggatttt
tagatgttcttgataaatgtgtaaaaaatacaaaatcagaAATAACCTGA
CTCTAATTTGTCATTTGGGGCTGAATTTGGCAAAACTAACTGGTTACTTA
TTTATAAGATCACATTGTTCTTGGTCTTCTATGTGCCTTTCTCATTAATA
CCaaagttattttatttttgaaaaatataaatatgcTCTTTGTTAAAAAA
CCTTCTCTAGGGAAAAGTTTGGAGACATTCCGTGTGATGTTGAAGAGGGC
AAGAAAGAGAATCGATCACAGGGCATGTGGAAATGGAATTATAAGAGGTT
TCTTGAACATTATCAAACAGATGATGTGTACATGGTCAACAGTTTGAGAG
GGAAATTACTTGGTAAGTTTTTGTTTTACTGGCTTGATTTGATTAAAGTA
TCGTTGGTTTTAAATCTCTGATCATTGATATTCGGAATTTGAGAAGTGAG
AAAATACAAGGTCTACAATCTACGTCAAAACATATTGCCAATTTTGCTTC
ATTCCtagtttttggaaatttgtagtTCAGGTCAGAAAGTCACTTTTAGG
ctatttgttaaaaatgtaatcgaatatttttcaatttgggaggggtttat
agactttcatgctatattctgagccttttTGGACCATTCTAAAcgttaag
tctagtgttaaaactcagagttaaaactctagccttccaacctaagttag
agcgcttccaaattgtttgtggcaATAAGATTTCGTGAGGGTTTCCCTTT
TCTCTCAAATATAATGTTCTTGATTTTAACTTTCAACAATAGCTTCAGAC
CACAGCGATAAGGGAAAAagagaagattttttttgaggaggatattttca
cttGAAACTTTATTGTACTTGTGTATATAACAGCTCAATTCTGATTTCCC
CTTACCTTCAATGCTAGTATTTGGAAGCTTTAGATATCAAACTAAAAATC
TTCTTCCTACTGTGTTCATAACATACATTTTTTCTGAACTGACTGCAGAC
AACATACATATTTTTAAGATATATTGAATATATTGTAACTAGCATTTTCA
CATCTAAACATCAATTTTAAGTAAATCAAAGGACGTGAAATTCTTGCCGG
CTAATAGCCAGCCTTGTTTTCACCGGCAAAAGCCGATGATTTCTTAGGTG
TAGTCGGCAGTGTAATTACATTAGAATATTTATGTACTTAAAAATCGCTC
GGAGATTCACatataaacaaatcaaaaactaACTGTCTCAACCTGTATTA
TCTTTTCTAAACAGAGGATCTTCGCTTACTTCCAAGTTTGTCATGTGGTG
GCTTCACCAAAGTAATAAGTGACGTCATCATGTGGTTTTCCAGTGGAGGG
ACTAAATCAGTACTTCATAACGATCGCATTGATAACATTAACTGTTTGTT
TAGTGGTACCAAAGAACTTTATATGGTTGATAAGGTAAGGTTTTTACTCT
TCAAATTTGCATCTTCAAAATTCTTAAACCTCCATTATTCATAGTGTGAA
CCCGGGGGGATAGGATTTATAAGGGGATAggatttttctgatttgagCTT
CTCGCATCATCATAGTGTGTAGAGGGGTATGAACCCAGGGGGCTTTTAGT
AAGACTGCCTTACATTTTACAGCAAATATAAGGGATACCATGTTTTCTGA
CCcctttttgaataattttgccTATGTCTCTCTCCACCCATGTCAattta
atgtgaaaaagcttgtaatttAAAATTGTTGATGAATAAACAAACGAGAT
CAActtagttttaaaaacaaaaccttgaaTCTCTAGAAATTCGAAGAATT
CATAGATTTTGATGCAGAAGAGGGAGCTTATAGCAAAGTTGACGTGGACG
CTGTTGACCTCGACAAATACCCAGGAATCGCTCAAGCACCATGGTGGAAA
GCCAAAATGCAAGCTGGAGATTGTCTTTTCATTCCTGAAGGGTAGGTAGT
TTAGAAGTAAAACGCTCAATGACTATTCGAATCTAGGGAGAGGAGAGGAG
CTTTACTATGTTAAACGCTGTCGAGCCTTTTGGTTTCTGCCTAGTAGACC
CGTCTTAAGCCTGTCTGTCCCCATAATTGATAGGGCTTCTATATgtataa
aatattcaaatatgtTGCCTCAATTCTATTAATAGAgacgatattttacg
tggatagcttAGTAACCTAGGACTATTAGGCAGTCTCTTTTTTCACGGGA
TCCCCATGGCTAGTAgactatctatgaactgaaggGAATATTGGAAGGAA
GGAGCCCCTGTTCTGACGCCTCTTTGGCCACTTggtcattgggcttttcc
agaaatagtccgtgcccccctgttgaggttaacgatttttgttcaaaagt
ggatatccaggggttaaatatctacaaggggtGGATATCCAGGAGGTAAA
GTTTcctttcaagtaaaaaatacgataccaggggtaagcatctttataag
agaggatatccagggggttgtgAGTATATTtctaagagtggatatccagg
gtgtCTTTACTAACAACGTACCCAGGGGgctcgatacttcgaaaaatcaa
tatcctcaacagtgggggtaaaaaaaaattctgggaAAGCCCATTGCTCC
ATGAATCATCATAGCACTTTCTTTCCATGTACCCCCTACAGATGGTTCCA
TCAAGTTCGATCTCACACTGACAACAAACGAAACATGGCTGTCAACGTTT
GGTTTCATCATCTACCCCTCATCAATCAAACAGAATGTCAACAAATTGAC
CAAGAAGAAAACTTCAACGCATTCCGGACGTATGATGGTATAAACATTGG
AAAGTCCATAGAAGGTGCTAGGTAATTGAAACTAAAACATattttaagta
agtaagtttgcgaccgctactcctttccctggatttctccacttaccctt
gattcgtctctttagttgctgagcatcaagcagagagacatcaagtgCCA
TTTTGGGactctttggtatgacccgactagggatcgaacccacaaccttg
cgcagccgcaccgtagctggatgctctatcttcatgctacggtcgcgTAT
TTTAAGAGTATATCTTAAGTTCATCTAATAAGTTTGAGATTCTCGACCCA
GTTTATtaatattggaagtttatcttGGCTTGGATCAaaagatttacgtt
tggctatgTTTCCTCCACTGTTTGTACTAAGACCTACTGATTACCTATAG
TTTCCTTAAGGTGTGAATCACAATGTTATCATAGACGTAAGATAAATTAT
TTCTGAATAATAAAGTTCTAAAGTTCATGTTTTACTCTAGGACTTTTAGA
AGCTTTTCGATTATTTCTTTGGTTTCCATGGTCAGCCGGCTCGGCCAACT
ATGAATTGAACGAAACTTTGAAAGAAGCGTGGACTCGAATCAAGGAGTGG
TTTTTGGGCGATGTCTTTGGTTTTCTCAGAACGCTCTAAAAGGACTCTGC
TTAGTGACTTGTATATTTTTTCGTAGATTTTTACTACAACTGGAAGTCAA
AGATGGACCTTTGAGTTACAAGAAATTCGTACGAAGTGTGAGAGTAAGTC
AGCGGCATTTTTCTCACCGATTTTTTCCTACATCCTGGTGAATGATACGG
GGTGTATTTATTTAAACCTGATCCTTTCAACAGATGAATGTAGTTGTTCC
CAAATAATTCGTGTTAGTTCGTAGAAATTTGAAATCCTTGCAGTCTTGTA
GCTCTCAACTCTCTTCCATCAAGCAGATTGCACATCCGTGGTATCCTCCC
CTGAAACTACCTTTCATAAAATTACAgttgaatttttcattatttttcaa
aatttcaggaGCATTCTGATGGATTAGCACGTAAATCCGTCTTCAAAAAG
GTTTGTGcactcattttatttttttttacattaggtGGAAGGCTATGGTC
TTGTTGGTCTTTGATCTTATCTCTCGGCTTTTTCTGCTGAGTGTAACCAA
GGAACTTTAATAAAGTAgtaacaaaaacaaagcaatttctcttgattata
cccctgtctccttgaAATATGCGTTCTGAGGCTTCCTAGGGTCCTTGACA
ACAAGAAcacatcaaattttctttattttacccctgtctcgtcagaacac
ataagatcacttctttcattttttctttaggtCATTCCATTGTtggataa
aaacaaagataaacaaatcaCTCTTGAAGAAGTGAACGCTTTAAGTGACG
ACGAAGTTCGACTAGCTTCTCAGCTGTTTCCAATGTTTGCACttgaggaa
gaagaagaagaagatgaactctttgaagaagatccaatgttggagaagaa
tgaaaatgaagatttgcCTCCTGTTAAAAGTGAAATTAGTAGTGGTAGTA
AACTTAAGAAAGAACTATGA Coding sequence (CDS) from alignment at sc0000145_pilon:742052..746971+ >XLOC_035807 ID=XLOC_035807|Name=XLOC_035807|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2508bp|location=Sequence derived from alignment at sc0000145_pilon:742052..746971+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaacagttttgtttcttttattttacttaTTGTTTGGATTGACTT
TGGAAATTGCGATCTGAAAGGTCATTTGGAGCCTTTAGGTCAACAAAGAG
AATCAGAAGGCCATATTGAAGTTAGGGAAGATGTACCAGATGTGATTACA
TTCCATAAAGATTACGTTGTTGGAAGTAAACCAGTTGTCTTCAAAGGTGC
TGGTACAAATCTACCAGCTTTTCATTTATGGACAGATGAGTACATGATat
gaaaaacagttttgtttcttttattttacttaTTGTTTGGATTGACTTTG
GAAATTGCGATCTGAAAGGTCATTTGGAGCCTTTAGGTCAACAAAGAGAA
TCAGAAGGCCATATTGAAGTTAGGGAAGATGTACCAGATGTGATTACATT
CCATAAAGATTACGTTGTTGGAAGTAAACCAGTTGTCTTCAAAGGTGCTG
GTACAAATCTACCAGCTTTTCATTTATGGACAGATGAGTACATGATGGAA
AAGTTTGGAGACATTCCGTGTGATGTTGAAGAGGGCAAGAAAGAGAATCG
ATCACAGGGCATGTGGAAATGGAATTATAAGAGGTTTCTTGAACATTATC
AAACAGATGATGTGTACATGGTCAACAGTTTGAGAGGGAAATTACTTGGG
AAAAGTTTGGAGACATTCCGTGTGATGTTGAAGAGGGCAAGAAAGAGAAT
CGATCACAGGGCATGTGGAAATGGAATTATAAGAGGTTTCTTGAACATTA
TCAAACAGATGATGTGTACATGGTCAACAGTTTGAGAGGGAAATTACTTG
AGGATCTTCGCTTACTTCCAAGTTTGTCATGTGGTGGCTTCACCAAAGTA
ATAAGTGACGTCATCATGTGGTTTTCCAGTGGAGGGACTAAATCAGTACT
TCATAACGATCGCATTGATAACATTAACTGTTTGTTTAGTGGTACCAAAG
AACTTTATATGGTTGATAAGAGGATCTTCGCTTACTTCCAAGTTTGTCAT
GTGGTGGCTTCACCAAAGTAATAAGTGACGTCATCATGTGGTTTTCCAGT
GGAGGGACTAAATCAGTACTTCATAACGATCGCATTGATAACATTAACTG
TTTGTTTAGTGGTACCAAAGAACTTTATATGGTTGATAAGAAATTCGAAG
AATTCATAGATTTTGATGCAGAAGAGGGAGCTTATAGCAAAGTTGACGTG
GACGCTGTTGACCTCGACAAATACCCAGGAATCGCTCAAGCACCATGGTG
GAAAGCCAAAATGCAAGCTGGAGATTGTCTTTTCATTCCTGAAGGAAATT
CGAAGAATTCATAGATTTTGATGCAGAAGAGGGAGCTTATAGCAAAGTTG
ACGTGGACGCTGTTGACCTCGACAAATACCCAGGAATCGCTCAAGCACCA
TGGTGGAAAGCCAAAATGCAAGCTGGAGATTGTCTTTTCATTCCTGAAGG
ATGGTTCCATCAAGTTCGATCTCACACTGACAACAAACGAAACATGGCTG
TCAACGTTTGGTTTCATCATCTACCCCTCATCAATCAAACAGAATGTCAA
CAAATTGACCAAGAAGAAAACTTCAACGCATTCCGGACGTATGATGGTAT
AAACATTGGAAAGTCCATAGAAGGTGCTAGATGGTTCCATCAAGTTCGAT
CTCACACTGACAACAAACGAAACATGGCTGTCAACGTTTGGTTTCATCAT
CTACCCCTCATCAATCAAACAGAATGTCAACAAATTGACCAAGAAGAAAA
CTTCAACGCATTCCGGACGTATGATGGTATAAACATTGGAAAGTCCATAG
AAGGTGCTAGATTTTTACTACAACTGGAAGTCAAAGATGGACCTTTGAGT
TACAAGAAATTCGTACGAAGTGTGAGAATTTTTACTACAACTGGAAGTCA
AAGATGGACCTTTGAGTTACAAGAAATTCGTACGAAGTGTGAGAgaGCAT
TCTGATGGATTAGCACGTAAATCCGTCTTCAAAAAGgaGCATTCTGATGG
ATTAGCACGTAAATCCGTCTTCAAAAAGgtCATTCCATTGTtggataaaa
acaaagataaacaaatcaCTCTTGAAGAAGTGAACGCTTTAAGTGACGAC
GAAGTTCGACTAGCTTCTCAGCTGTTTCCAATGTTTGCACttgaggaaga
agaagaagaagatgaactctttgaagaagatccaatgttggagaagaatg
aaaatgaagatttgcCTCCTGTTAAAAGTGAAATTAGTAGTGGTAGTAAA
CTTAAGAAAGAACTATGAgtCATTCCATTGTtggataaaaacaaagataa
acaaatcaCTCTTGAAGAAGTGAACGCTTTAAGTGACGACGAAGTTCGAC
TAGCTTCTCAGCTGTTTCCAATGTTTGCACttgaggaagaagaagaagaa
gatgaactctttgaagaagatccaatgttggagaagaatgaaaatgaaga
tttgcCTCCTGTTAAAAGTGAAATTAGTAGTGGTAGTAAACTTAAGAAAG
AACTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:742052..746971 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1015-1254:4681 |
| Aaloc | 973-1014:4359 |
| Aaloc | 907-972:4028 |
| Aaloc | 727-903:3193 |
| Aaloc | 571-723:2337 |
| Aaloc | 403-570:1817 |
| Aaloc | 250-399:762 |
| Aaloc | 1-246:1 |
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