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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:482694..486116+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035762 ID=XLOC_035762|Name=XLOC_035762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3423bp|location=Sequence derived from alignment at sc0000255_pilon:482694..486116+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaaaacaaaTTGGAGAATATACCATATGTATTTGACGAGCAATTGCA
AAAGGTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTGA
CCATCTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCATC
GCCGATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCGGTaa
ttctcattttcttttttttctcttcgatttttttAGCAATACCAATTTGA
GCAATCGCCAAATATTTACAGAAACATCCAAAATATAGAGCTGTTCAGCC
ACATGTTTGTTTATCACTCAGAACTCCTGTTTCTAAGTAAATTGATTCTT
TTGTCAGTATggaataataagcagatattcaataggtaaaagttaataaa
tccaataaccaacgaaaacctattgaatatatgttttattatatgcctag
aggcaaaaacaaaacataaatcaTGTAAATAGTCGAAAGATTcacataaa
acactcccataatcgaacgttcgaatgtttttcttttttaatgattttct
taattactttgagtcataaaatttgttcatcCCCTCATGATTTATAACTT
TATTCTAAttatgaattgaaaaatctatgactagtgattttgaaatttat
tttttcaattatatCGTTAGCAGAGGGGACCGTAGCTGTGATCCGATCTT
CATACGTAGAGTGCTAAGAAACAGAGGTCCCTTGAATTGCCCTGCTTCTT
AAAGAAGACgttgtacacgtttttataagactGTCAAAAACTTCTTTGGC
ATCAAACCTGATCAAacctaaaaatgctctaaaaatgttcttattttcaa
cattttagcgAGTAACTtggttttttaagaaattgcatgtgtTTTTAGAG
TCTGTAAAGCTTTAAAACGTCTTGGAATGTTCTTAGAGCTAAGCATCTTA
TTCTTatataaataaaactttgatataaaaaacgtgtatatgttTTCTTG
GTGTTTTCCCAGGGAAAAATGATATCATGTTAATGGATGTATACTTAACC
CATCtagtatattttatttttcaggactTCTTATGAAGGTTTTCCAATAC
AACCTAGTGACAGGTGATCATTGTTATATCGAATTCGAACATGCAAAATT
GAAAACCGTTTCCAAGTACAGCTCATCTTTGGAACACATGATCAAAATGA
AGAATCTTCATCTTCATGAGACAAGTAACTCATCCACGGAACCAGTACAA
TTTCTTATAGTTGAACAACCATCTGAACCATCCATACAATCACCAGATGA
AAACAATTCATCAGAATCAGTATCAATGACCGAGCATGATGCTACAGCGA
ATGGCGATACAGGAGAAATGCCAAACTCGCAAGAAACTGTGGTCGGCACT
TCCCAGATTTCCAATAATATGGTTTTAGATGAGTATGGCTACTATAGACC
ACAGCCGTTCCTCTATGACGAGACATTGAGgaaatttaatataaaaacaa
agtcaaaaaatattaagaactcaacgaaagaaaaaacgATTGCTAATGGA
AGTAAGACGAGATGTAGGGCGGAAGGGCGTATCACAGATccaaagaaatt
gagtaatgcTCGATGCGGAAGAAGCAGAGGTAATTGAAGCTCCCTctatt
tcgatttttaagggaccacaaaaaacttcttcaaattaaaaaatgaatcg
AATTAGGTTCTACTTaaaaaaaTAGTCGGTCGGCTGTCGGCAAACCTACA
TTTTTAAAAGTCCAGCCTTACAGAGATTATTTTATACTACTTCTTAGCTG
AGCGGGACAAATATTTAAGTTCGAATGTTTTagaaggttcgaattagagg
gaGTTGACTGTATTTCTTTTTATCGTTTGAGGCTATAAGACCAAAAGAAT
CGGAATTATATGTGTTTTCAGACTTGTTTTTTCACGTCCAATCCTAGTGG
ATTTCTTTTCACACTTGTTTTCGCCACGTATAATGTTGTAACaattattt
ttgtccaaaatatGGTGTCTGGTTGAAGCGTGCTCATTTTTTCTTACAGG
GCTCCTGACATCCATTTATCAATACAGCCTTATGACAGGTGATAGTTGTT
ACATTGAATTCGAACACGAAGAAACGAAAGTTGTATCAAAATACAGTTCA
TCGATCGAATACATGATAAAGGTTCAAAACAGATTCTCTAACAATATAAA
CACTACCTTTGGAACAATGGTCGAATCTCTGGTCAATTATGATGCAGGAT
CGCAAGTGGTTACCAAACAGTCGATACACAGATCAACAGTCAGAAAAGCC
GAGGTACAAGATGTGCAGAGATATGTAGGTGAATCGGAAACTTCAAGAGC
AACCAATTCCATAGAGATTTCACCAACAATTATCGTAGATGAGATTCAAG
ACTCATCAACTTCACAATCTCAAGACGAACCATCTCTAGAGGGACTAGCA
AATGTGACCATATTGTTGGAACAAGCTAACCAACGATCAAATGATGAGCT
GCAATCTGAAACGCCCATAGCCACTCAAACGTCGCCAAATGCCGCCCTTC
CGTTCGTCTATGATGACCAAATGAGGAAAATCGAAGTCAAATCCTCAATA
AATGAAGCAAGATGTAGGGCGGAAGGGCGGATTAAAGATCGGAAGAAATT
AATCGATGCTCGAAATCAAAAGCGGCAAGGTACGTTCTAGATATACTTGA
TATTTAATTCCTCTGTCTTTGCATCCTATTCAGGATTGGCGCAGACATCC
CTCTAAAAGGTTTTAAGATCGAAAAATATAGCCTTTTAAACTATCTGAAG
GTCtttttttAAGGTCGTTTAAAATCCATCCAacataaaatttttgatgt
tttttaaatGTCCGGCCAACATTTCGTTCAAcaattgatttgaaatgcgt
TTGAATGAGATGTTAGATTGATTTGCGCCAGCCTTTACATTGGTCTTTCA
CCAGACCATTTGTTGTTTTTGTCCGTCTTAAAATTGCATCAGGATTCACT
TAAAAgtgtatttcattttcatttttctcagaTCTCTTGGCCAAGATTCA
CGAGTACAGTCTTTTAACGGGCGACGATTGCTACGTCCAATTCCAACACG
CACAACAGAAAACCGTCGCACGATACACATCAACAAAAGAGTACATGTCG
AAATTGAAACATGCAAATTCTTTACCCGCTTTTGATAATGATGGAGGGAT
TAATATAGAAATACCGAATGGTGAAATATTAGAGACTTTGGATATAAAGA
TTACTAAAAGACAACAACAGACAGTCGTTTCCATTggtgaaaaactttca
aatgatCCGTCCGCAAATGCTAATAATGCTGGCCATGTTGCACCGATGAA
TAAACGGACTAtaaaaaatgctacaaaacctaaaccttctccggctaaaa
aatcgaaaacatcgaaaaagtaa Coding sequence (CDS) from alignment at sc0000255_pilon:482694..486116+ >XLOC_035762 ID=XLOC_035762|Name=XLOC_035762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3546bp|location=Sequence derived from alignment at sc0000255_pilon:482694..486116+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaaaacaaaTTGGAGAATATACCATATGTATTTGACGAGCAATTGCA
AAAGGTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTGA
CCATCTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCATC
GCCGATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCGatgg
aaaacaaaTTGGAGAATATACCATATGTATTTGACGAGCAATTGCAAAAG
GTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTGACCAT
CTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCATCGCCG
ATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCGgactTCTT
ATGAAGGTTTTCCAATACAACCTAGTGACAGGTGATCATTGTTATATCGA
ATTCGAACATGCAAAATTGAAAACCGTTTCCAAGTACAGCTCATCTTTGG
AACACATGATCAAAATGAAGAATCTTCATCTTCATGAGACAAGTAACTCA
TCCACGGAACCAGTACAATTTCTTATAGTTGAACAACCATCTGAACCATC
CATACAATCACCAGATGAAAACAATTCATCAGAATCAGTATCAATGACCG
AGCATGATGCTACAGCGAATGGCGATACAGGAGAAATGCCAAACTCGCAA
GAAACTGTGGTCGGCACTTCCCAGATTTCCAATAATATGGTTTTAGATGA
GTATGGCTACTATAGACCACAGCCGTTCCTCTATGACGAGACATTGAGga
aatttaatataaaaacaaagtcaaaaaatattaagaactcaacgaaagaa
aaaacgATTGCTAATGGAAGTAAGACGAGATGTAGGGCGGAAGGGCGTAT
CACAGATccaaagaaattgagtaatgcTCGATGCGGAAGAAGCAGAGgac
tTCTTATGAAGGTTTTCCAATACAACCTAGTGACAGGTGATCATTGTTAT
ATCGAATTCGAACATGCAAAATTGAAAACCGTTTCCAAGTACAGCTCATC
TTTGGAACACATGATCAAAATGAAGAATCTTCATCTTCATGAGACAAGTA
ACTCATCCACGGAACCAGTACAATTTCTTATAGTTGAACAACCATCTGAA
CCATCCATACAATCACCAGATGAAAACAATTCATCAGAATCAGTATCAAT
GACCGAGCATGATGCTACAGCGAATGGCGATACAGGAGAAATGCCAAACT
CGCAAGAAACTGTGGTCGGCACTTCCCAGATTTCCAATAATATGGTTTTA
GATGAGTATGGCTACTATAGACCACAGCCGTTCCTCTATGACGAGACATT
GAGgaaatttaatataaaaacaaagtcaaaaaatattaagaactcaacga
aagaaaaaacgATTGCTAATGGAAGTAAGACGAGATGTAGGGCGGAAGGG
CGTATCACAGATccaaagaaattgagtaatgcTCGATGCGGAAGAAGCAG
AGGGCTCCTGACATCCATTTATCAATACAGCCTTATGACAGGTGATAGTT
GTTACATTGAATTCGAACACGAAGAAACGAAAGTTGTATCAAAATACAGT
TCATCGATCGAATACATGATAAAGGTTCAAAACAGATTCTCTAACAATAT
AAACACTACCTTTGGAACAATGGTCGAATCTCTGGTCAATTATGATGCAG
GATCGCAAGTGGTTACCAAACAGTCGATACACAGATCAACAGTCAGAAAA
GCCGAGGTACAAGATGTGCAGAGATATGTAGGTGAATCGGAAACTTCAAG
AGCAACCAATTCCATAGAGATTTCACCAACAATTATCGTAGATGAGATTC
AAGACTCATCAACTTCACAATCTCAAGACGAACCATCTCTAGAGGGACTA
GCAAATGTGACCATATTGTTGGAACAAGCTAACCAACGATCAAATGATGA
GCTGCAATCTGAAACGCCCATAGCCACTCAAACGTCGCCAAATGCCGCCC
TTCCGTTCGTCTATGATGACCAAATGAGGAAAATCGAAGTCAAATCCTCA
ATAAATGAAGCAAGATGTAGGGCGGAAGGGCGGATTAAAGATCGGAAGAA
ATTAATCGATGCTCGAAATCAAAAGCGGCAAGGGCTCCTGACATCCATTT
ATCAATACAGCCTTATGACAGGTGATAGTTGTTACATTGAATTCGAACAC
GAAGAAACGAAAGTTGTATCAAAATACAGTTCATCGATCGAATACATGAT
AAAGGTTCAAAACAGATTCTCTAACAATATAAACACTACCTTTGGAACAA
TGGTCGAATCTCTGGTCAATTATGATGCAGGATCGCAAGTGGTTACCAAA
CAGTCGATACACAGATCAACAGTCAGAAAAGCCGAGGTACAAGATGTGCA
GAGATATGTAGGTGAATCGGAAACTTCAAGAGCAACCAATTCCATAGAGA
TTTCACCAACAATTATCGTAGATGAGATTCAAGACTCATCAACTTCACAA
TCTCAAGACGAACCATCTCTAGAGGGACTAGCAAATGTGACCATATTGTT
GGAACAAGCTAACCAACGATCAAATGATGAGCTGCAATCTGAAACGCCCA
TAGCCACTCAAACGTCGCCAAATGCCGCCCTTCCGTTCGTCTATGATGAC
CAAATGAGGAAAATCGAAGTCAAATCCTCAATAAATGAAGCAAGATGTAG
GGCGGAAGGGCGGATTAAAGATCGGAAGAAATTAATCGATGCTCGAAATC
AAAAGCGGCAAGaTCTCTTGGCCAAGATTCACGAGTACAGTCTTTTAACG
GGCGACGATTGCTACGTCCAATTCCAACACGCACAACAGAAAACCGTCGC
ACGATACACATCAACAAAAGAGTACATGTCGAAATTGAAACATGCAAATT
CTTTACCCGCTTTTGATAATGATGGAGGGATTAATATAGAAATACCGAAT
GGTGAAATATTAGAGACTTTGGATATAAAGATTACTAAAAGACAACAACA
GACAGTCGTTTCCATTggtgaaaaactttcaaatgatCCGTCCGCAAATG
CTAATAATGCTGGCCATGTTGCACCGATGAATAAACGGACTAtaaaaaat
gctacaaaacctaaaccttctccggctaaaaaatcgaaaacatcgaaaaa
gtaaaTCTCTTGGCCAAGATTCACGAGTACAGTCTTTTAACGGGCGACGA
TTGCTACGTCCAATTCCAACACGCACAACAGAAAACCGTCGCACGATACA
CATCAACAAAAGAGTACATGTCGAAATTGAAACATGCAAATTCTTTACCC
GCTTTTGATAATGATGGAGGGATTAATATAGAAATACCGAATGGTGAAAT
ATTAGAGACTTTGGATATAAAGATTACTAAAAGACAACAACAGACAGTCG
TTTCCATTggtgaaaaactttcaaatgatCCGTCCGCAAATGCTAATAAT
GCTGGCCATGTTGCACCGATGAATAAACGGACTAtaaaaaatgctacaaa
acctaaaccttctccggctaaaaaatcgaaaacatcgaaaaagtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:482694..486116 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1384-1773:3034 |
| Aaloc | 754-1380:2052 |
| Aaloc | 199-750:1077 |
| Aaloc | 1-195:1 |
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