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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000191_pilon:358420..362216+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035746 ID=XLOC_035746|Name=XLOC_035746|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3797bp|location=Sequence derived from alignment at sc0000191_pilon:358420..362216+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAACATTTGTTGTGCTGAAACATCGACCGACAGTTTCAAAACTAA
TGGGAAAGTCAAGAATAACTTTGATGAAGATGATCCATTACAGGGTTCGA
ACCAGGAACCCCTTGAACTACAGCATATAAGTGAAAGAGAATATGGTAAG
agctcattcattcattcattcatccattcattcattcattcctcaatcca
ttcattcattcattcattcattcattcattcattcattcattcattcatt
cattcattcattcattcattcattcattcctcaatccattcattcattca
ttcattcatcttTTATTTGATGCTGTTAATGTGCTTCATCGGCCCTAATT
CTAGAAAAACAGGGCATAGTCCGCTAGGGATCGTTGAAAAGGACATATTT
TCTGCTGTTCCTTCATGGAAAAGGCTCTTCTTACCATTACTTTTACATAA
CTCAAGAAGAACAGAGACTGATTGAAATGTATGAAAAAGGGTCTGTGATT
TTATCTATCCACTCTGTAATTTTCTGAATGAGTTTGATTTCTATGCTTGC
TGAAGTTCAGATATGTATGCTAGTGGAAATTCAAGATGGTTCTATGACTT
CATCCTAATCTTTCGTCTCTTATTCGTTTCAGAGCTTtcagaaaacaaag
aaactcTCTTTCTAAGAAGGTCAGAAGCTGAATCAGCTGCACGGCAGggt
aaatatgaaaaattgtttACCATGTCTATCAGGATGCTTGTTGGTTGTGA
AGGAACTTTTACGATTTTAATCTTCAGCTCATATTTAGGCCCTATTACGG
GAGCCCCATGgttattttcagtttaaaaaatttcctttctagTAATAGAG
AGGTTGATAGTAGGTGCTTGAAAGCCTtccattttaatattttatagaGC
ATTTTTGATCTGAATGTTTTTAGTAAGCTTATAAAACACCATAATAAACT
ATTTCGTGCTTCAAATATTAATTTTCCAGCTCAAGAAGAAAAAAGGCGAA
GACGGCACACTTTATATTCACCAGATCGTACAAGcgaaaattcaatgaaa
aagactaaattgaaaaaatcgaaTTCATGTTCGACAATATTTATAGACGA
TAATACTGCATCTCAACCGAACTTAAAAATGATGTTAAAATGTGTTTCCT
TAGCTATTTATTACCACGTGAAAAACAGAGACTATGAAGTTCATTTATTA
GATATTTTTGATGAGAAGCTTCATCCGTTATCGAAAGACCCCGTACCAGA
AAATTATGGTCGAATTAATCCGGAACATAAACATATTTACCGGTTCCTTA
AGACGTTATTCAGTGCTGCACAGTTGACGTCTGAATGCGCCATCATTACA
CTGGTTTgtaccatagatttataaagcctgaagggctagatgtcgtgctt
ttgctgaaaagtgtgccgaggttaggtaggaaattctacctaggtcacgt
gacattacaataaaatttcagcgcttAACCAATAAGAAACTTcgcaggtt
tttgaaaacaatagcagcaatatttcttgcgatattcacttttttttgct
gggaaGAGCTTAacgcacgacatctagccctttttTATCACTGTCACGTC
ACTGTTTTTGATAATGACTCGGGAGAAGTATCTTCAACGTTACAAAATCA
TTCGGAAAAATTTCTACTCTACCCAACCccaaatttcttaatttttgcta
aaaacaCTGCAGTGAGTTATTGACAAATAGGCAAAATACTACAGCAAGTA
TCTTATAAGTATGAAAAACTTGTTACAGTGGTGACCCAACTGATTTTCTT
TCTTGTTTCATTGTAGGTATATTTAGAACGACTGATAACCTATGCAGAAT
TAGACCTTCATCCGAGTAATTGGAAACGAATAGTTCTTGGTGCTGTCTTG
TTAGCTTCCAAAGTATGGGACGACCAAGCAGGTCTGTCGTCGATATCTAT
TATACATTTAGATCTCATGGTTTCAGCTCATCTTTTGAAACTTTCATAAC
AATTGTCGAAAACTATGGTCTTagaaatttcaacattttactCCAGCCCA
ATAACCTTTATCAGTAACccaataggccatttcacagtcaatggatcatg
ggtaatcaggactaaTTACGCCCCGATAACAGTTTCCCGTTGGTTAGATG
caaaaatctttcatttcaacaatctttttaaatttttcaaaacattagaC
CAATAGGAGTCTGTTaaattttttacataaaaaactCATCGACACGTTTG
TAAGAGAACTTATACCTGAATGATGTACTAGTTTTGAGTACGAAATATTG
TATTGtcactttgttgtttttcatgtattgaaaagtcaaaatgaacatTT
TCGGACTTTCTTTTATGTTATATTATTTGAAATTGTCAGCTGGATCTGGA
TTCTACAATATGAAAAGAGATGCAATTGTTTGAAGTTTGAAATACTATCA
GGCCAAATACATTATCGGATTCTGTCAATATTGTATGAAACAGTAAATTC
CCCTACTAGTGTTGATTTTGAGGAAAGGGAGGGAGGGGAAAGAATTTCTT
CAGGAAAACGATATAAagtattttaaacattttatattttcttcccTTTT
TAGTTTGGAATGTAGATTACTGTCAAATTCTTCGAGATATCACAGTAGAA
GACATGTAAGTCTTATTGATTACCATTTCTTGGGCGGAGATTTATTTGCA
TATTATGTTTCATCTTGGAAAGTGTCAGggttgaaaagaaatttcacGCA
GATGGAAAATATACTCTTAACGATTTTTGAAGGATCTactaaatgaaaaa
atagccATTTTCGAATGAAAGATTAACTTGTAATATCCAAAAGCTCGATT
ACTACTAAACCGAATTACTCTTTCTCGCTGACACACAAAAGCCTCTTGCC
CCCCTAAGACTCCTCTTTGGCACAACCTTGCAATCTAAAGCTTTtataat
ttcatgaaattttctttttaccttCTTATCCTGCAGGAATGAACTAGAGC
GGATGTTTTTAGAGTTACTTCAATACAACATCAACGTCCCCTCCAGTGTG
TACGCTAAATATTATTTCGATTTACGAGCGCTGGCTGAGAGGAATAACTT
CCAATTACAAATGCAACCACTGGACCCTAAACGTGCTAGAAAATTAGAGG
TTTGTAATGCAACTTTAACTTTGACATGGTATTAGCTTCCCCACAATTGA
AAGTACAAAAAATCAACACGGTAGTTTTGTCAGGTTTTGTTGGCTACACc
aaagaaaaatgtttattttgcacATGAAAAACATGACAAATAGCACCATA
GTCTTTACACACATAGCTCTTGGCTTCTATTCtctcaaaattattttagc
AGATACTTTATCTGTGAAAATATTTCCTGTACGACTGaaggataatttca
aacttttttttttgacgtcacttttacctttcgaagctcctgcagtagca
aaataatcgaatttacgtcaaaacacttgaaaggcttctattttatcgaa
aatcgtcaaagtggaactcactaagaaacgagatgaaaaatcccggtttt
tagtgaggtgctcgctagcaAGGGTAGTGCTATCACGGAATGATCGCCCG
GCTCGCCCCTTACATCTCCGAGCTAAAGTAATCAGCCATATAATTTTATT
CCTAAAGATTCTGCATTTCTTTTACCATTTCAGGCTATATCTCGATTTTG
TGATGAGAAATTCACGTTACCATCAAGGCGTTTACACAGGTCGAACAGTG
TGGATGATATGCGATCTAAAAGGCGAAGTATTGCTGTTATTTCTTAG Coding sequence (CDS) from alignment at sc0000191_pilon:358420..362216+ >XLOC_035746 ID=XLOC_035746|Name=XLOC_035746|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2058bp|location=Sequence derived from alignment at sc0000191_pilon:358420..362216+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAACATTTGTTGTGCTGAAACATCGACCGACAGTTTCAAAACTAA
TGGGAAAGTCAAGAATAACTTTGATGAAGATGATCCATTACAGGGTTCGA
ACCAGGAACCCCTTGAACTACAGCATATAAGTGAAAGAGAATATGATGGG
CAACATTTGTTGTGCTGAAACATCGACCGACAGTTTCAAAACTAATGGGA
AAGTCAAGAATAACTTTGATGAAGATGATCCATTACAGGGTTCGAACCAG
GAACCCCTTGAACTACAGCATATAAGTGAAAGAGAATATGAGCTTtcaga
aaacaaagaaactcTCTTTCTAAGAAGGTCAGAAGCTGAATCAGCTGCAC
GGCAGgAGCTTtcagaaaacaaagaaactcTCTTTCTAAGAAGGTCAGAA
GCTGAATCAGCTGCACGGCAGgCTCAAGAAGAAAAAAGGCGAAGACGGCA
CACTTTATATTCACCAGATCGTACAAGcgaaaattcaatgaaaaagacta
aattgaaaaaatcgaaTTCATGTTCGACAATATTTATAGACGATAATACT
GCATCTCAACCGAACTTAAAAATGATGTTAAAATGTGTTTCCTTAGCTAT
TTATTACCACGTGAAAAACAGAGACTATGAAGTTCATTTATTAGATATTT
TTGATGAGAAGCTTCATCCGTTATCGAAAGACCCCGTACCAGAAAATTAT
GGTCGAATTAATCCGGAACATAAACATATTTACCGGTTCCTTAAGACGTT
ATTCAGTGCTGCACAGTTGACGTCTGAATGCGCCATCATTACACTGCTCA
AGAAGAAAAAAGGCGAAGACGGCACACTTTATATTCACCAGATCGTACAA
GcgaaaattcaatgaaaaagactaaattgaaaaaatcgaaTTCATGTTCG
ACAATATTTATAGACGATAATACTGCATCTCAACCGAACTTAAAAATGAT
GTTAAAATGTGTTTCCTTAGCTATTTATTACCACGTGAAAAACAGAGACT
ATGAAGTTCATTTATTAGATATTTTTGATGAGAAGCTTCATCCGTTATCG
AAAGACCCCGTACCAGAAAATTATGGTCGAATTAATCCGGAACATAAACA
TATTTACCGGTTCCTTAAGACGTTATTCAGTGCTGCACAGTTGACGTCTG
AATGCGCCATCATTACACTGGTATATTTAGAACGACTGATAACCTATGCA
GAATTAGACCTTCATCCGAGTAATTGGAAACGAATAGTTCTTGGTGCTGT
CTTGTTAGCTTCCAAAGTATGGGACGACCAAGCAGGTATATTTAGAACGA
CTGATAACCTATGCAGAATTAGACCTTCATCCGAGTAATTGGAAACGAAT
AGTTCTTGGTGCTGTCTTGTTAGCTTCCAAAGTATGGGACGACCAAGCAG
TTTGGAATGTAGATTACTGTCAAATTCTTCGAGATATCACAGTAGAAGAC
ATTTTGGAATGTAGATTACTGTCAAATTCTTCGAGATATCACAGTAGAAG
ACATGAATGAACTAGAGCGGATGTTTTTAGAGTTACTTCAATACAACATC
AACGTCCCCTCCAGTGTGTACGCTAAATATTATTTCGATTTACGAGCGCT
GGCTGAGAGGAATAACTTCCAATTACAAATGCAACCACTGGACCCTAAAC
GTGCTAGAAAATTAGAGGAATGAACTAGAGCGGATGTTTTTAGAGTTACT
TCAATACAACATCAACGTCCCCTCCAGTGTGTACGCTAAATATTATTTCG
ATTTACGAGCGCTGGCTGAGAGGAATAACTTCCAATTACAAATGCAACCA
CTGGACCCTAAACGTGCTAGAAAATTAGAGGCTATATCTCGATTTTGTGA
TGAGAAATTCACGTTACCATCAAGGCGTTTACACAGGTCGAACAGTGTGG
ATGATATGCGATCTAAAAGGCGAAGTATTGCTGTTATTTCTTAGGCTATA
TCTCGATTTTGTGATGAGAAATTCACGTTACCATCAAGGCGTTTACACAG
GTCGAACAGTGTGGATGATATGCGATCTAAAAGGCGAAGTATTGCTGTTA
TTTCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191_pilon | genome | sc0000191_pilon:358420..362216 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 916-1029:3684 |
| Aaloc | 754-915:2988 |
| Aaloc | 703-750:2606 |
| Aaloc | 586-699:1817 |
| Aaloc | 214-585:982 |
| Aaloc | 148-210:635 |
| Aaloc | 1-144:1 |
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