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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000191_pilon:158354..164157+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035740 ID=XLOC_035740|Name=XLOC_035740|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5804bp|location=Sequence derived from alignment at sc0000191_pilon:158354..164157+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGGataattttgttaaaatataCGAATGTTCCCTTATAGACAAACAAAC
GCAGCGAAACATTATGTGTGATCAGTGTCAGCGAAACCAATtagtcaaaa
tggaaaaattacgAGCTTTTGAACCAGTTGATGAGGTAGGTCGcaaatat
ctGaAttttttctttttttatgttttttttgtcacaACCAGAGTgctgaa
attaaattttatgattttttaagcCCCGTAGATGGACTTTAAAAGGTCCA
AAAAGCCGCCCTTAAGGTTGACACATACCCACATCCTCCATTTGACTATC
ACATTTATAATCCAgctatcattgtttttagtaTTTAATAAGAAgtaaaa
aactctaattttgttTTCCATCTGTTCAGAGAACTTTTGAGTGGGAGGCG
ATGGAATATGAAGGTTACCTCAATGAACGATATGGCTTGTGTGCGATTTG
TCGACTGTCTTTCAAGGATGAGATCAACCAACAGAACACTCAGATTAGAG
AAATGTACAGCGAAGAATtcgaaaaacaaaaaccaaagagCCGTCTCAGA
AAGCTGAAAAGAAAGGTATCTCTCCTGACAACTTTCGTGGAACTTTCCAA
TTTTTCTGTGTGGTAATTTTGTGTTTCTTTCTCCAACTGTTTGTAAGTGT
CATGGTATACagcagctcgcgtctgtcaagtcaCAATGTCTATTCTGCGC
CGTGACTCCTACCCCTTATTGGAGCTTTACTAAATAATGCAGTTTCTGTA
AAAAGGTTTATTTTTGTACGCTTTAGAAAAACGGATTTACGATCATACGT
AATTACCGAAAGCTGTTACCATTGCTCTTGTTCTTGCTATCACTTCTACC
TTTGAATATCTATAAATGGAACTTGGAAATGGAAATGAAAGGtatgattt
gaaatttgtaaaaacCTTACTTTAACTTTCTTTTCCACATTGGTATGCAA
CCGAGGAGTATATTATAGCCTGGGTTGCGCTGTTAAATCACCGGGTCAAT
TATTTAAAAGTCAAATTCAGCTAGGAGTCGATTCTACCCTAACGGTATAG
TTAAATTAAACCATAACTTATATTCTTTCTACGACCTCGGTCCTGGATAT
TGAAACGGTAATTATGAATCGCCGGGTTTTTTAATGTGAAAATTAGGGGC
ATAATATTACTTTTcgtttttatagaaatgctACTATTGGTGACATCTGG
CACGGCTCTGgttttcaatattattttgtttttgaaacgaTCAAGGTTTC
ACTGGTAAGTGCTGATGTAAAGCATGATGCagggaaataattttttgtca
atcgaaTATAGAATCATTGCTTTTAAGAATTCCCGTCTCCCTTGGAATAA
GATAAAGAGTGcatttgaattttattcttttaaCTTAAACTTCATTCTCT
CTTCTTGTCCAGGTTACAAGCTGTATCTTTTGTGCTGTGGTCAAATCTTT
TATTCAACACATACAAAAAGAGGTATGCTTTCAAGtcttactttttttaa
tttttttaatgcaaTTTGACCCTTTCCCTTCTTTAATTTTCTGAACGATA
TCcgataaattatttttcattgaaaaaaagaaaaaatggttCAGGGGAAG
tatctttttcaatattttaacaaaGTGAACTGAATTTTTCACATacattt
agaccatgttcagacgttacggtttcgtatcgttCCGGTATGGTTTTTGT
Tatggatcgagagtgttcatattagtttcggaacgtttcggagcaagaca
ATCTGTTTTACTTtgcaacgtcttcttttttgacgctTCGAATTTTGACG
CTCACACTAGTTttggaaccgtttcgttttggAACGATTGGAAactaagt
tattttgattccccttcTCCTTAGctttaaaatgtattttgaccaaaaca
atcgggcgattttacaaaatgccctctactatatcTATATGGGTATTCAG
AATGTCTTAGTACAAATAGTGGAGAAAACATCATCcacattgcccgatga
tgggagaaaaatctctcaaaacttagccaaacgtaaatttcgtgatccaa
gccacgataaacttccaatatgaatatcactgggtcgataaactcAAACC
TATTTATTAGATTAATCAATTCAAGTATTACCTACCATTTTCTTACACGG
AATTTTCCTCCCGTTCGGTGCCGTGCGAGCACAAATTtcgagaaattctt
ttgttttttctgctttgtcagcataaaggcGCACCTcttttctatatcat
aaaaGAATATCATTAAGTTTGCTGTTCCATTTAGGTCAGTCAAAACACCA
TTGACATTGAAAATGACAACAGGCGTCGAACTCGCATCGTTTGTTTTACA
ATGCGTCAGATACATTTATCGAAAATGGAAAGAAAGAAAGTATATCAAAG
GTcgaaaaaggtatttttacaTTCTATATCGCCtaaataaaatttggaaa
aaattattgcTTGAGATAAACTTAGGTCTTTTCAAATTCAGACTTGGCcc
tgtttttttgttatttttttcctgaACTACagtctaattcgaacctctta
TATTCTAGTGGGGGGCCAagaattttattcgaattagagcaaaattcgaa
taacagagattATTTCATCCCCCAGCTCAGAGAGGATTAATATTTTAGTT
GGAattttagaaagattcgaatagaaAAGGTtcgagagagttgactgtac
tAATAACATCATACGATGATTGAGCATATTCTCGGATTTCTATTCCTTAT
TGAAGCATTTCAAATACTTGTCTCATCTTTTCAGTAAACTGGACCGTTTA
ACACCGAATAAATCACGTGGTTTCTTAGATGATTCAACTATTACGTCATT
CGAATCAGACTTAGGCTCCGAATACACAGCAGACGCAAAAAGCGTCGATT
TATCACCAGAACGAGGCAGGGCTGTTATCACACCACATACTAACAATCGA
GTCGTTGGGAATGTTGTTATGGAAACAAATATATTCGAGACAAGAAGTAG
AGATCCATCACCCGAACGAAATCAACCAACAATGACATATGTTGGTGAAT
CGAGTAAAGCGAATAATGTGAGCTCATTTTTGTGGGaactttttctttcc
aaatgataattatattggttcaaaatttcagccaaatcaagaTCTGCATC
GATAAGATTGATTCCCATGAGTTAATTTAGAAATTCTTTTCCCAAAACGT
TTCctttaaaataatgaataatcaaaagttttcaccaaaaaaagttaaag
ttaTAATCATAGTTATTTTCATTaacatttttggcaatttgttTTTGCTG
CCATAGGTTGACAAACGAAAGGACGCGCCTGACTTATTACAAGGACATCT
TAACGATATGTTTATCGGAAGAAAACGAGATAACACTCAAAGTAAGTATC
ATACAACTTCTCTGTTCATTTAGAGCGTTAGATTCCTCATTTCGGCAAAC
CATGAAGGCAATTTAGAGGTAATATAGAtgtagatggagagaaaacgtcg
cggtaatgacctaaatggtcgttcaaatattttataaatctattcaaagc
ggatTTCCTTTGATGTACACATCATTGGAAGCAagaaacatcaatttata
aatttataagaacagaaagaggctgttccgttgattttgaaaaacttaat
tttgcggaaaatccttgttaaaatatgatttgaaatagttttaaCCGATG
TAAGGATAATagaatatattaatttcataaggatacATTTTTGGGCCGAA
attttgtgaacattgagaGTTTCATCACGTTTTCTTTGAaggtttcttat
cttaaaatcttcacatccaagtgggcagcggttttcatactctgacaaaa
agtTCCTAATCGTGTACGATACTAATCGTACGTACGTGTAAcatgtaatt
cttttttaaatccatCGATGGATTTATGAGCAGCTACCCCTAAAACTTTT
gggtattgtgcttattatatgaagtttttctcgatttttcatgacaaggc
tagtatctttcaatatacttgttaaaaatgaaatacctTTTCATTCAGAT
TCTATTATCTTAAATATTCCGACTAGTACACGCaaaattaatcattttat
tCCCAAAGCAgcaaaacagctgtttgcttccgatgataagtCAGAATAGA
ATAAAAGGCATTGACatctatttttattaccttcatAGGCAAACCTTTAT
TAGGCCGGTAGGAAACGATATTGTTGTAGTAATATTTCCTATAAGAAGGT
GATGATGAAATAAAGATACAATATTTTAGGAATGACTGTCTTTCAATTAC
CAAACTCATtggtttcaattttaattttgctttattttcaaattctcctt
caaaacaaagaaatgtttttttttttcgtttTCtccgCCATAGCTTCAAC
GAGAGACGCCTCCGCCAACCACGTCGTTGCCGCCCTCAAATACAACAAAG
TACGTCGTACTGAAAGTATGCCATCCTTGGCCAAACAACCATTGATTCGG
CCGGCTACATTTTTATACAGTGGATCATCTCGAAGTGAAACCACGGAAAT
GGAACGAAATAATAACGAAATAGTTTGCAAACGAGAACAACCGGTGACAA
ATGATTCGAATATAAACGAAGTAGTTTCGCAAAGGGAAACCCTTCGACCT
GATCCCGACTTCTTGGTAAGTTTAACTTGAAGAAGGGCTGTGAAATGATT
CACACAGGCTCATTTAGAACTTTCTAAACAAGATGATGCTATTTACTATT
AGAAATGGCCAAACATCTCTTAAGGTGACACCAATTTGATcggttgtttt
acgggcccgacccaccctaaaattccaaaaatcgaaataaaaattaaatt
gattttggcagtatatttttattttcattgcttaaCAAATTCCCAATTtt
gtagtttttccaaggttttgagaatttcatgttcaatttttcatgttaTC
CATGAACtcgatagatagatagatagatagatggaTACACaaagtctttt
tattttctttttcgcatttttgtcaagatgtagtagtagtttttgctgcc
tttttaggagattttattgGTCAACCGACCGACGGACCCTCTTTTTTGAG
TAGCTTGGCCCATAAAACAACAagttaaattggcctcgcctaaaGTGAAC
TTTGATCACGaaaaaaaGCTTTTCAGTGAGTTTTAAAGATCACAACATTC
TAAGGAAAGGTCAAAATGTTACAGTAATGTTTCTTAAGACCTCTTTGTGT
TCATTAGCTGACCCCAACAGCATTTATCAGAaagtattgggcttttccag
aaaaaaaatcgtgcaccccctgttgaggaggtcaatttctgttccaaggg
ggtaaggtttgaaaatttgcaaaaattcggaattcaagaggggtatgatc
ctaaattGCCTGAATTACAAAaagttggacctcctcaacagggggtgcac
ggtttttttctggaaaagcccactTGGCTTTGGGAAAAGCTTAAGGGAAA
TCCTCTCAAGTAATACCAGTCTGAGTTGAtgaaaaataagacaattcttT
ATGCAAATCATTAATTAGATAATTGGTGACTCGAGAAAATCCTTTCTTTT
CTATGAATTGAATGTTGAGAattgatttcattattttttcaggtTTCCCA
ACAAAGAGAGACGATATCTAACCTGCAAACAGACTCTCTTGGATCACAAT
TTGTAGAAACTGATCAGAAAACAGCAAAAACTTTTCCATGGAAATTTGTT
TTCATGACGATTTTCTTGTTGAGTGTGGTGGTTAATGGtgtattttgtac
tttt Coding sequence (CDS) from alignment at sc0000191_pilon:158354..164157+ >XLOC_035740 ID=XLOC_035740|Name=XLOC_035740|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3006bp|location=Sequence derived from alignment at sc0000191_pilon:158354..164157+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGGataattttgttaaaatataCGAATGTTCCCTTATAGACAAACAAAC
GCAGCGAAACATTATGTGTGATCAGTGTCAGCGAAACCAATtagtcaaaa
tggaaaaattacgAGCTTTTGAACCAGTTGATGAGAAGGataattttgtt
aaaatataCGAATGTTCCCTTATAGACAAACAAACGCAGCGAAACATTAT
GTGTGATCAGTGTCAGCGAAACCAATtagtcaaaatggaaaaattacgAG
CTTTTGAACCAGTTGATGAGAGAACTTTTGAGTGGGAGGCGATGGAATAT
GAAGGTTACCTCAATGAACGATATGGCTTGTGTGCGATTTGTCGACTGTC
TTTCAAGGATGAGATCAACCAACAGAACACTCAGATTAGAGAAATGTACA
GCGAAGAATtcgaaaaacaaaaaccaaagagCCGTCTCAGAAAGCTGAAA
AGAAAGAGAACTTTTGAGTGGGAGGCGATGGAATATGAAGGTTACCTCAA
TGAACGATATGGCTTGTGTGCGATTTGTCGACTGTCTTTCAAGGATGAGA
TCAACCAACAGAACACTCAGATTAGAGAAATGTACAGCGAAGAATtcgaa
aaacaaaaaccaaagagCCGTCTCAGAAAGCTGAAAAGAAAGAAAAACGG
ATTTACGATCATACGTAATTACCGAAAGCTGTTACCATTGCTCTTGTTCT
TGCTATCACTTCTACCTTTGAATATCTATAAATGGAACTTGGAAATGGAA
ATGAAAGAAAAACGGATTTACGATCATACGTAATTACCGAAAGCTGTTAC
CATTGCTCTTGTTCTTGCTATCACTTCTACCTTTGAATATCTATAAATGG
AACTTGGAAATGGAAATGAAAGaaatgctACTATTGGTGACATCTGGCAC
GGCTCTGgttttcaatattattttgtttttgaaacgaTCAAGGTTTCACT
GaaatgctACTATTGGTGACATCTGGCACGGCTCTGgttttcaatattat
tttgtttttgaaacgaTCAAGGTTTCACTGGTTACAAGCTGTATCTTTTG
TGCTGTGGTCAAATCTTTTATTCAACACATACAAAAAGAGGTTACAAGCT
GTATCTTTTGTGCTGTGGTCAAATCTTTTATTCAACACATACAAAAAGAG
GTCAGTCAAAACACCATTGACATTGAAAATGACAACAGGCGTCGAACTCG
CATCGTTTGTTTTACAATGCGTCAGATACATTTATCGAAAATGGAAAGAA
AGAAAGTATATCAAAGGTcgaaaaagGTCAGTCAAAACACCATTGACATT
GAAAATGACAACAGGCGTCGAACTCGCATCGTTTGTTTTACAATGCGTCA
GATACATTTATCGAAAATGGAAAGAAAGAAAGTATATCAAAGGTcgaaaa
agTAAACTGGACCGTTTAACACCGAATAAATCACGTGGTTTCTTAGATGA
TTCAACTATTACGTCATTCGAATCAGACTTAGGCTCCGAATACACAGCAG
ACGCAAAAAGCGTCGATTTATCACCAGAACGAGGCAGGGCTGTTATCACA
CCACATACTAACAATCGAGTCGTTGGGAATGTTGTTATGGAAACAAATAT
ATTCGAGACAAGAAGTAGAGATCCATCACCCGAACGAAATCAACCAACAA
TGACATATGTTGGTGAATCGAGTAAAGCGAATAATTAAACTGGACCGTTT
AACACCGAATAAATCACGTGGTTTCTTAGATGATTCAACTATTACGTCAT
TCGAATCAGACTTAGGCTCCGAATACACAGCAGACGCAAAAAGCGTCGAT
TTATCACCAGAACGAGGCAGGGCTGTTATCACACCACATACTAACAATCG
AGTCGTTGGGAATGTTGTTATGGAAACAAATATATTCGAGACAAGAAGTA
GAGATCCATCACCCGAACGAAATCAACCAACAATGACATATGTTGGTGAA
TCGAGTAAAGCGAATAATGTTGACAAACGAAAGGACGCGCCTGACTTATT
ACAAGGACATCTTAACGATATGTTTATCGGAAGAAAACGAGATAACACTC
AAAGTTGACAAACGAAAGGACGCGCCTGACTTATTACAAGGACATCTTAA
CGATATGTTTATCGGAAGAAAACGAGATAACACTCAAACTTCAACGAGAG
ACGCCTCCGCCAACCACGTCGTTGCCGCCCTCAAATACAACAAAGTACGT
CGTACTGAAAGTATGCCATCCTTGGCCAAACAACCATTGATTCGGCCGGC
TACATTTTTATACAGTGGATCATCTCGAAGTGAAACCACGGAAATGGAAC
GAAATAATAACGAAATAGTTTGCAAACGAGAACAACCGGTGACAAATGAT
TCGAATATAAACGAAGTAGTTTCGCAAAGGGAAACCCTTCGACCTGATCC
CGACTTCTTGCTTCAACGAGAGACGCCTCCGCCAACCACGTCGTTGCCGC
CCTCAAATACAACAAAGTACGTCGTACTGAAAGTATGCCATCCTTGGCCA
AACAACCATTGATTCGGCCGGCTACATTTTTATACAGTGGATCATCTCGA
AGTGAAACCACGGAAATGGAACGAAATAATAACGAAATAGTTTGCAAACG
AGAACAACCGGTGACAAATGATTCGAATATAAACGAAGTAGTTTCGCAAA
GGGAAACCCTTCGACCTGATCCCGACTTCTTGgtTTCCCAACAAAGAGAG
ACGATATCTAACCTGCAAACAGACTCTCTTGGATCACAATTTGTAGAAAC
TGATCAGAAAACAGCAAAAACTTTTCCATGGAAATTTGTTTTCATGACGA
TTTTCTTGTTGAGTGTGGTGGTTAATGGtgtattttgtacttttgtTTCC
CAACAAAGAGAGACGATATCTAACCTGCAAACAGACTCTCTTGGATCACA
ATTTGTAGAAACTGATCAGAAAACAGCAAAAACTTTTCCATGGAAATTTG
TTTTCATGACGATTTTCTTGTTGAGTGTGGTGGTTAATGGtgtattttgt
actttt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191_pilon | genome | sc0000191_pilon:158354..164157 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1342-1503:5643 |
| Aaloc | 1072-1341:4396 |
| Aaloc | 985-1068:3307 |
| Aaloc | 703-984:2786 |
| Aaloc | 577-699:2286 |
| Aaloc | 517-573:1414 |
| Aaloc | 439-513:1178 |
| Aaloc | 322-435:777 |
| Aaloc | 136-321:380 |
| Aaloc | 1-135:1 |
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