XLOC_035689 (mRNA) -

Overview
NameXLOC_035689
Unique NameXLOC_035689
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000628_pilon:3795..5715-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035689 ID=XLOC_035689|Name=XLOC_035689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1921bp|location=Sequence derived from alignment at sc0000628_pilon:3795..5715- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTGCAGCGAAAAATGTGTTCACGGTTGGTGTATTGGACTTGATAAATG CATGTGTGAAGAAAGCTATACTGGAGACTTGTGTGAAACTAAAAGTAAGA TCCAAGAATAATCTTTTTAATTCAATGATTAATGTTTAGGGTCCGAACTG ACAAGGATTGGTTCTTTTCGTTTTCAGGACCGTCACCTGGGACGATTCAT TCTATTCATTTTTCATGCTAGGCCCCCGGGGGGTACACGTTTTTTTTTTT ATAAGAACGTCAAAAATTTTCGAAGCCTTCGGATGTTCTTAGTTTTTTGG ATTTGAAGCCTAAAAATGTTCTTAAAATGTTCTTATTTTCAGCATTTTTT GAGCATTTTGATGTAATTTCTTAAGAAAATGCATGTTTTTGAGTCTCCAA AGCCTTAGAATGTTCTTAAAATGTTCTTAGATTTTTGGGCCTCGAAGCCT TATGTTCTTATATAGTTTGTTCTTATAAAAAAAAAAACGTGTACTAGGGT TGGCGAATGAGGGGTATGTGCGGACGAGACCTCCGAAAACCGACCCTTAG GGAGACTGATTTTTGCTGAAAAGGTGACCTTTAGAGAGATTTTTTGATTT TTTTTTTTCGATTTTTGAAAAAAGTCATACCCTTAGAAAGACTTTATTAC AATTTTTTCTCTGGAAATCAAAAAATTTCCTAAAAATCCTAAATTTTCCG ACCCTTAGAAAGACTAATTTAAAACTTTCTGATTTTTCCGACCCTTAGAG AGACTTTGAAAGATGAAAAAACCGACCCTTACCGTTCGCACATACCCATC ATCCAATTTTGCCTAAGTACCCCCCCCTCCCGGGGGCTAGGCCAGTTCAT TCAAACTCTAGATACCGAGTGCGCAACAAAAGGTTTCTCTCTCTTTAAAA GTAAATTTCTCGAAATCCAAAAATCGACCTATCAAATAGAAAGAGGAATG ATTATAAACGACATCTAATCACTAATCACTTACTTATAGAACCATATTGC AATCCAGCCTGTGAAAACGGAGGTAGCTGCGCTTCAAACAATTATTGTGA GTGTTTAAAGGGATATGGTGGATCGACCTGTGGTGTTAAAACAACGACAA CAACAACGAAAACGACACCATCAACGCCGGCAACGACAACAACATTAACG TCGGTAAAATCAACGTTGGTGAAGCCTGGTAATGGAAGTCAGGAAGATAA TAGTGATGAATGGCCTTTGAATAATCTCTCAATTAGTATGCATTTTTATT TTCTTTGCACTTGCTTTAAGTAAGAGACCGCTGTGCAAGTGGTAGAGCAT TCATTTACGATGTGAAAGGTTGTGGGTTCCACCCTCAACCGGGTCATACC AAAGATTTCCAAAATGGTGCTTGCTGCCTCTCTACTTGATGCTCAGCACT TAAGAGGGTTGCCACTTCAGAGAAGGATCAAGGGTAGGTGGAGCAATAAA TACAGGGAGAAAGAGGCGCCCTCCCCTATCTTCGGGTAGATAGCTATCGA AAGAGGAGCCTTCGGGTCGCCTACGACTGCGGTCGCAGACCTACTACTTA CTTACTTACTTACTTAAGCAAGAGATGAGGGTATATGTTGTCTGATCATA CAAAATGAAAAGTCTCATTTTTACCCAAACTTACCACAACCCCTGGACCC TAACTCAACTAAGCTTCTTTTTTTGTTTTAGAGTTAACCTGCCATTTTTC TTTACTTTCTTTAAGCTTTTATTGTCGGTTTCGGATTTATGTTGGTGATC GCTGTCATCGCTTTGAGGTGTATTTTTATTATCAAACGAAAGGCCACCGC AGTAAAAAAAGACCATCCCCCTCCTTATGAAGCAGCGAACACCAACCATG CGCACGAGATGGAAACTATTCAACAACCAAGATTATATCCTACATTACCA ACTTACAATCAAGCTCATTAA

Coding sequence (CDS) from alignment at sc0000628_pilon:3795..5715-

>XLOC_035689 ID=XLOC_035689|Name=XLOC_035689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1092bp|location=Sequence derived from alignment at sc0000628_pilon:3795..5715- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTGCAGCGAAAAATGTGTTCACGGTTGGTGTATTGGACTTGATAAATG
CATGTGTGAAGAAAGCTATACTGGAGACTTGTGTGAAACTAAAAACTTGC
AGCGAAAAATGTGTTCACGGTTGGTGTATTGGACTTGATAAATGCATGTG
TGAAGAAAGCTATACTGGAGACTTGTGTGAAACTAAAAAACCATATTGCA
ATCCAGCCTGTGAAAACGGAGGTAGCTGCGCTTCAAACAATTATTGTGAG
TGTTTAAAGGGATATGGTGGATCGACCTGTGGTGTTAAAACAACGACAAC
AACAACGAAAACGACACCATCAACGCCGGCAACGACAACAACATTAACGT
CGGTAAAATCAACGTTGGTGAAGCCTGGTAATGGAAGTCAGGAAGATAAT
AGTGATGAATGGCCTTTGAATAATCTCTCAATTAAACCATATTGCAATCC
AGCCTGTGAAAACGGAGGTAGCTGCGCTTCAAACAATTATTGTGAGTGTT
TAAAGGGATATGGTGGATCGACCTGTGGTGTTAAAACAACGACAACAACA
ACGAAAACGACACCATCAACGCCGGCAACGACAACAACATTAACGTCGGT
AAAATCAACGTTGGTGAAGCCTGGTAATGGAAGTCAGGAAGATAATAGTG
ATGAATGGCCTTTGAATAATCTCTCAATTACTTTTATTGTCGGTTTCGGA
TTTATGTTGGTGATCGCTGTCATCGCTTTGAGGTGTATTTTTATTATCAA
ACGAAAGGCCACCGCAGTAAAAAAAGACCATCCCCCTCCTTATGAAGCAG
CGAACACCAACCATGCGCACGAGATGGAAACTATTCAACAACCAAGATTA
TATCCTACATTACCAACTTACAATCAAGCTCATTAACTTTTATTGTCGGT
TTCGGATTTATGTTGGTGATCGCTGTCATCGCTTTGAGGTGTATTTTTAT
TATCAAACGAAAGGCCACCGCAGTAAAAAAAGACCATCCCCCTCCTTATG
AAGCAGCGAACACCAACCATGCGCACGAGATGGAAACTATTCAACAACCA
AGATTATATCCTACATTACCAACTTACAATCAAGCTCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035689XLOC_035689-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000628_pilongenomesc0000628_pilon:3795..5715 -
Properties
Property NameValue
Aaloc343-546:205
Aaloc97-339:931
Aaloc1-93:1922