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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:536338..542399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035677 ID=XLOC_035677|Name=XLOC_035677|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6062bp|location=Sequence derived from alignment at sc0000028_pilon:536338..542399- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGATCTATTTAGTGTTGACTTTCGTGATGCAATCAGAAAAGTAGT
GCGTTCTGAATTGAAAGAAAAATTTGGTATCAAGATTCACAAAGAGAAAC
ACAAAGGAACGGTATGTATATTTTACTTAATTTTAAGTTAAATCTGATTC
ATATTCTGACTTCTTATACTGTGTGCATTTTAATAAAATAAAATTGCGAG
TAAGATTTTTTGCTTTCAAAATAAGGCATACAGTACATCCTTAAATTGAC
TTGTAAAAATTGTTAGAATTTGAATTTTTTAAACAAGTTGGATCATTTTG
TATTTAGCTGATATAATTGTTCGCTTGAAACTTAAAGTTCTACAAAAACA
AAGTTTTGGATTTGTAAGTCATATCCCAGGTATAATGATAAAACATTTTT
TTTTTGTCAGTAAATGATGACCTCTAGATATTTCTCGACTCTTGGCCTGT
GAATGAATCAAGCAATGATATAAAAAAAATTTTCTTAGAGTTCATCCACA
ACGACGTGTCAATCAAAGTATTTTGGTGTCCCATTAGAAGACGTCCCCTC
AAAAAGTGTCAAAGATGACCAATACTTCCGAATACCGATGTAAGTAAGAT
TTTCAAATTTTAACTGGGAATTTTTCTTGTTGTTAATTGATCCTCAATAT
CAATGAACTTGACAAATTCACATAATGTTGTGCTATACAAAGCGCAAATT
AAATCACGTGATTTTGAATATTCTATTCATTCCATAATTTAATTCAATTA
ATTTTCGTGCGCCTTTTATTTTCACGCTTCTAATTTTTGCGTCTTTAATT
TTCGCGCAGCTCGTAAAATAGAATATTCGCACATTTTGCAATTTTAAGAA
TATTCTCTGAGTGTTTTTGACGAAACTCACTTTCAGTGTGTATTCAAGCT
AGATTTTACATCCCAGAGGCATATTTACCATGAATCGATTCCCATTATAT
TAAAAGAGCACTAAGATGAGATTTTTACACGTTCAGAACGATTACTAATT
CCAAGTGCGCAAAAATAGGCCTATTTCGCGCGCCTTTTATTTTCGTGCAC
GTATTTTGCGCGAAAATAAAAGACGCACACATATTTTTCGCGAAAAGAAA
AGGCACGCGAAAATTCATGAAATTAAAATTGGAAATAACAGAGAAAAATT
ATATTTAATCTTCCATCTCTTCAGATTTCTAGCAGATTCGTTAGATTACC
TCAACCATCATGTCAAAATTGAAGGACTTTTTCGCAAGTCAGGGTCAGTT
GGAAGACAGAAAACTTTAAGGGTAAATATTTTTCTCATCACTCAGACCAT
GTTCAGACCTTACGGCCGTAACACTCTGAAACGAAACGGTTCCGAAACAA
ATTTGAACGTGAAAATTCGAAACATTAAAAGAGAAGATGTTATGAAGCAA
AACAGATCCAAACGGTTTCGCTCCATTTTTTCATCTAAACGGAACTGCTC
CGTTTTCATGCTCCGAAAAGTTTCGAAATCAGTATGAACACTTCCTATCG
GTAACGGAAACCGTACCGGAGCGATACGAAACTGTAACGTCTAAACATGG
TCTCAAACCTAAGAGATAATCAAAGTCAATATCAAAACATTGTACATAAC
GACCTATTAAACGCTTTTGTAATTCGAAATGAAATATGACTCGAAGAACT
TTTATATGGCCTCTTTATAAAAAATAGGTTAAAGGGGAGTCAATCGTTAT
TTTCTTTATTTTTCAGGAACTCCTTGAGAAAGATGGGACTTGTTGTTCTT
GCGAGTTTGTCCAACCACACGATATAGCTTCATTAGTGAAACAATTCTTC
CGAGAATTGCCAGATCCTCTACTAACCAGAAGATATTGTCCAGCTTTCTT
GAAGTGTATTTCGTTGAATAATACTAATGACTGTATACCAGCGCTGGCTT
TGTGTTGTTTACTGTTGCCCGACGAACATTTACGAGTGTTGAAATATTTT
GTACAATTTATATCCGAAATGGCAAACCATTCATTGGAATCTAAAATGAC
TCTATCAAACTTAGCCATTATATTTGCACCAAACCTAACAGCTTCGTCTT
CAAGTAAAGAGAAAAATGGGGAAAAGACTTTGAAAGATTTTACGCAAATT
GTGGATTTGTTGTTTAAAAATGCGCACCTGATTGGTATGGTTCCTGACGC
TTTGTTTAATAAAGCCCTAACAATGAACCAAGAAGGAGGATTTTGCAGTT
CTTCGGGTGATGAACTGGATGTGGCCACGGATGAGCATCCAGGTCGTGGA
CGCAATCTCCAAAGATCGGATAAGAAAAGAGATAGAAGCAAATCTATAAC
AGGTTTCATTTTACTCGCAACAGCATTTACTTTAATCGGATTAACTTTCG
CGAGATTAAATCTCACATTTTCGTGTGAGATTCCTGATTTGCATTAAATT
CACAACAAAATTTTTTGAATCGCTTTTTCGGCGTAGAAACCAGTCCAAAG
TCTCCATTTGTGGAAAAAATGGCTATTTTCAGCTGTTTTCAGGCTTATTC
GCGAAATTAAATCCACGCGAAATTTTTCAAAACTCTGACGTTAAATCCAG
AAAATTGAAATTTGATCTCGTGAAATTTAATCCAATTAAAGTATCCCTTT
TAGAAGATTTGTTACTCTTTCTTCTTTCTTCTACTCCTTTGAATGCAAAT
AATCAATTGCACGATGATCCATGTATTTTTACAAGATTCCACTCCACGCT
TTTGTCTCCAGTTTTGCGTATAAAAATCCAACCCATTTTACATCAGCTTT
ATTTTAGCTATTTTTCGATTCGCTTTTTTTTTCAGGTTTTCTGCGTCGAA
ACTTCAAAGCGAACGAGAAAACAGAGAAATCTTCTAGTTCGACCAACAAG
CATGCAAGGTCGAGGACCTGTGAAAAGCCTTCAACAAGCAAGGAAGATTT
GCTACAAATTCCCACAAGAACTGACTCAAGTATACTCACTTTTTTCCGTA
AAAATCTTTCTCGTGAAAACTTAAAATATTTCAAATAGATTTTGTCAAAT
TCGTCGTGATAATTAGGCTGTTCGACATAAAAGTTGTCTTCGAGTTCTAA
AGGTTTATTCTTGACTTGAACCTTCCTAGCAAAAGTAGTTCTTGTTCATA
ACAAGATGATCCCTTGATATTTTAATGTTTCCTAATTCCATACTTTGAAT
TTCTACTACTTTCGTTTTCAGTAAAAGAATTCGGCGAGCCAGTTTGGAGG
AACCAACACAGTGAAAAACCAAATACTAAACGAAGAAATAATTCCAAAAC
AAACATGAGTCCTGTCCGAAAAAGGTAGAAATATATATCTCTACAAATAT
TGACTATATCACAGCAGGATCATATGCATATAACTGCACATTTTCGTCGT
TAGTGAGACATTATTAGGATCTCCAGTTCGTTGATATAGGTTTGTATTGA
ACTTAATACAGGCATGTCTGTCATGTCGATCTTAAAAAATCATTCGTGGA
TTAAGTCTTAATTGATGTTAATGAATATTTTCCTTTGCAGTCCTCGTTTG
AGTGCGCGGGAAGTGCACCACGCTACACCACCAGTTATCTCGCTTGCCAA
ACTGAAATCTGTTTCCAATCAAGTAGCATCGACGCCGAGACGATTACTTC
AACCTATACACGGCAATCAAGGTATTTCATCTTTCTCACTAAGTTAGATA
AAGTCGATATTTAACCAGTTAACGTAGATAGCCTAGAAATCAAGGACTTT
TAGAAGAGCTATTTATAAACTTAACGGAATATTGGAAGGAGCGGGGAATC
GAACCTGCTCCTTATTTTTTTTCACAGTTAATATATTGCATATAGAATCA
TTATTCGGGTTGAATAATGACCATTCTTCACGGTTTTTTGTCGTGATTTA
ATATGAGCATGAGAATAAATTATTGTGACCGTTACGACACAAAGGCTTCT
ATACAGTTTTTCATGTTGTTTTTTTAAGTTACGTAACTTCAGCCAATTTG
GAAGTAAACGTTCGATTAGCAAGAGATCGCCTCTACAGATTCGAACATTC
ACTTAAATAATGAATAAAATAATAACCTAAATATGTGTATGTATTATTTT
GTCTCTGTCAAATCCTACTTCGTACTTTTTTTAGATCGTGAGAGGGTGGC
TCAAGCATTACCATCGCTCCCTTCGAGATATGGTCCCCCAATATCATCAA
CATCATCAAAAACGAAAGTCACGAAAACTGATGAAAACCAAATTCCGAAA
ATACCACCACCTACAAAACCAAAACCACGATTGACTCGTTCCAAGTCCTC
CACTCTGCACCATTCCTCCGGTAATAATTCAATCATAAGTCAATCCAGTG
AAAAGATGACAATATTTGCCACAGTTACGGCAACGACAACTGACAATAAC
GTCGAGACAACGACACAACAACGACAACCAGTACAACCTAAATTGAGTCG
TGCAACACAAAAACCTCATGTCAGAAAGAATAGACGACAGTCATCATTGG
ATCGAAGGCGTGCTCGTTATGCAAGGTTAGACGCGCATCTAAACTTTCAA
AGCTTCACACAGTATAGTTCTAGTGCTCAAGTAAAGATTGAGTTTTGAGT
AGATTGCTTTGATTAGCTTCTACAGAGTCGCGTTTAGCCTTGCATTGCAT
GCCTGAGTATCCAAAATGTAGACAGAAAGTTAGAATCATTCATAAGATGT
CTGAAGCTAAAGGCTTATTTTACTGCACTGTTAAAAACATACAAAACTAC
CTTAAAAGAAGAAAGTTTGACAGAAAGAAAACTTGGCGAATTTAAATATC
CTACAACCACTTAAACTACATTCCTGCCAAACTTTCTTTCAGCCTATGTT
AAAGTTATTGACATTCATGATTGGAGAAAATTTTTGAGAGTGAGTTATGT
ATAAAGTAAGAATATCAAAAGTTTATTAAGACACTGCAAGTTTAGCTTCG
TCGTAACAAACCTTACGCACCACATGTTTTGTCTTTATTACACGATAAAT
CTTGATTTTTGTGTTTCATTCTTCTATCTTTAGCGCGTCGCAGAGAATAC
GACGGCCCAAAGTCTCCACGTCACAAAAGAGTTTGACTGACAGCAATTTG
AGCAACGTAAGTCTCTTTTCACAAGAAGAAGGAAAACATTTTATATAATT
CTATCTGAAAAAAGTCAGACAGAAGAAATCTCGAATTTTTTTCCGCGGAA
GAAGGAAAAAACTTTTCTTTCGTCCCAGCTAGCCCACGTGTAAATGAGCG
AAAACCACATGAGCCGTGAATTTTTTTCCTTTTCGGAAAATGTCGCTATT
AAAAAAGCTTTTATCTTATTGCAGACTTAATGTGGTTACCACGCCCTGTG
AAAGGTGTCGTTTGTAACTGTCTCTTTAGCGAAACCTCCATATTCTACAT
GCTTTACATGTTTTTTTTATAAGCATAACGCTTATAAGCATATGAAGGCT
CAGATTTGCAGAATTCCTACGCATAACATAAGCATATATGTCAGCCTGGA
ATATTTTCAAGTTGTAATTTTTTATCTGTTTAAAGAGGTTTGGTAGAGGT
CAAGTAAGAAAAGAAATTCCACGGCTAGCTACATTCCACTGCTCTCAAAA
TCTGAAATTTCACTAAAAACTTGGCTCGGGGTGAATCATAAGCATGATTC
AAACGCATATAATAAGCATAAGCTATGCCTGAATGCTTTAAGAACTTAAG
CATACACGAGCCTGACCAAGGGGTATACACTTGCTTATAAAAAACAAACC
GACTTTTGTAATGAAATTGAATGATTGGTATTTTTCGGAGACTTTTTTCG
AGCCTGGATTTCAGGGAAACTTTCGGGTGGGGGGCAACCCATAGAGACAC
TTGTACGTTGAAATAAAAATGACTGATAATCGTCCTTTTTATATTGACTG
TTTTACAGCAATCTATATCAATGGAGGAAGTATGGTCAGCATCCTCAGGC
TTTGATGACGACACAAAAGATCGCGCATTCGTTGAAAATCAATCCGCTGC
TCTTCCGCCCATTGCCACTCTCGATTTATCAACTACTGAAAACCATACCC
CGAAACCACGCACTGCCCGACGTCGATTGCCGAAAGCTTCTAGCTCAACT
GCATGTTGTAAC Coding sequence (CDS) from alignment at sc0000028_pilon:536338..542399- >XLOC_035677 ID=XLOC_035677|Name=XLOC_035677|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3882bp|location=Sequence derived from alignment at sc0000028_pilon:536338..542399- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGATCTATTTAGTGTTGACTTTCGTGATGCAATCAGAAAAGTAGT
GCGTTCTGAATTGAAAGAAAAATTTGGTATCAAGATTCACAAAGAGAAAC
ACAAAGGAACGATGAAAGATCTATTTAGTGTTGACTTTCGTGATGCAATC
AGAAAAGTAGTGCGTTCTGAATTGAAAGAAAAATTTGGTATCAAGATTCA
CAAAGAGAAACACAAAGGAACGAGTTCATCCACAACGACGTGTCAATCAA
AGTATTTTGGTGTCCCATTAGAAGACGTCCCCTCAAAAAGTGTCAAAGAT
GACCAATACTTCCGAATACCGATAGTTCATCCACAACGACGTGTCAATCA
AAGTATTTTGGTGTCCCATTAGAAGACGTCCCCTCAAAAAGTGTCAAAGA
TGACCAATACTTCCGAATACCGATATTTCTAGCAGATTCGTTAGATTACC
TCAACCATCATGTCAAAATTGAAGGACTTTTTCGCAAGTCAGGGTCAGTT
GGAAGACAGAAAACTTTAAGGATTTCTAGCAGATTCGTTAGATTACCTCA
ACCATCATGTCAAAATTGAAGGACTTTTTCGCAAGTCAGGGTCAGTTGGA
AGACAGAAAACTTTAAGGGAACTCCTTGAGAAAGATGGGACTTGTTGTTC
TTGCGAGTTTGTCCAACCACACGATATAGCTTCATTAGTGAAACAATTCT
TCCGAGAATTGCCAGATCCTCTACTAACCAGAAGATATTGTCCAGCTTTC
TTGAAGTGTATTTCGTTGAATAATACTAATGACTGTATACCAGCGCTGGC
TTTGTGTTGTTTACTGTTGCCCGACGAACATTTACGAGTGTTGAAATATT
TTGTACAATTTATATCCGAAATGGCAAACCATTCATTGGAATCTAAAATG
ACTCTATCAAACTTAGCCATTATATTTGCACCAAACCTAACAGCTTCGTC
TTCAAGTAAAGAGAAAAATGGGGAAAAGACTTTGAAAGATTTTACGCAAA
TTGTGGATTTGTTGTTTAAAAATGCGCACCTGATTGGTATGGTTCCTGAC
GCTTTGTTTAATAAAGCCCTAACAATGAACCAAGAAGGAGGATTTTGCAG
TTCTTCGGGTGATGAACTGGATGTGGCCACGGATGAGCATCCAGGTCGTG
GACGCAATCTCCAAAGATCGGATAAGAAAAGAGATAGAAGCAAATCTATA
ACAGGAACTCCTTGAGAAAGATGGGACTTGTTGTTCTTGCGAGTTTGTCC
AACCACACGATATAGCTTCATTAGTGAAACAATTCTTCCGAGAATTGCCA
GATCCTCTACTAACCAGAAGATATTGTCCAGCTTTCTTGAAGTGTATTTC
GTTGAATAATACTAATGACTGTATACCAGCGCTGGCTTTGTGTTGTTTAC
TGTTGCCCGACGAACATTTACGAGTGTTGAAATATTTTGTACAATTTATA
TCCGAAATGGCAAACCATTCATTGGAATCTAAAATGACTCTATCAAACTT
AGCCATTATATTTGCACCAAACCTAACAGCTTCGTCTTCAAGTAAAGAGA
AAAATGGGGAAAAGACTTTGAAAGATTTTACGCAAATTGTGGATTTGTTG
TTTAAAAATGCGCACCTGATTGGTATGGTTCCTGACGCTTTGTTTAATAA
AGCCCTAACAATGAACCAAGAAGGAGGATTTTGCAGTTCTTCGGGTGATG
AACTGGATGTGGCCACGGATGAGCATCCAGGTCGTGGACGCAATCTCCAA
AGATCGGATAAGAAAAGAGATAGAAGCAAATCTATAACAGGTTTTCTGCG
TCGAAACTTCAAAGCGAACGAGAAAACAGAGAAATCTTCTAGTTCGACCA
ACAAGCATGCAAGGTCGAGGACCTGTGAAAAGCCTTCAACAAGCAAGGAA
GATTTGCTACAAATTCCCACAAGAACTGACTCAAGTTTTCTGCGTCGAAA
CTTCAAAGCGAACGAGAAAACAGAGAAATCTTCTAGTTCGACCAACAAGC
ATGCAAGGTCGAGGACCTGTGAAAAGCCTTCAACAAGCAAGGAAGATTTG
CTACAAATTCCCACAAGAACTGACTCAATAAAAGAATTCGGCGAGCCAGT
TTGGAGGAACCAACACAGTGAAAAACCAAATACTAAACGAAGAAATAATT
CCAAAACAAACATGAGTCCTGTCCGAAAAAGTAAAAGAATTCGGCGAGCC
AGTTTGGAGGAACCAACACAGTGAAAAACCAAATACTAAACGAAGAAATA
ATTCCAAAACAAACATGAGTCCTGTCCGAAAAAGTCCTCGTTTGAGTGCG
CGGGAAGTGCACCACGCTACACCACCAGTTATCTCGCTTGCCAAACTGAA
ATCTGTTTCCAATCAAGTAGCATCGACGCCGAGACGATTACTTCAACCTA
TACACGGCAATCAAGTCCTCGTTTGAGTGCGCGGGAAGTGCACCACGCTA
CACCACCAGTTATCTCGCTTGCCAAACTGAAATCTGTTTCCAATCAAGTA
GCATCGACGCCGAGACGATTACTTCAACCTATACACGGCAATCAAGATCG
TGAGAGGGTGGCTCAAGCATTACCATCGCTCCCTTCGAGATATGGTCCCC
CAATATCATCAACATCATCAAAAACGAAAGTCACGAAAACTGATGAAAAC
CAAATTCCGAAAATACCACCACCTACAAAACCAAAACCACGATTGACTCG
TTCCAAGTCCTCCACTCTGCACCATTCCTCCGGTAATAATTCAATCATAA
GTCAATCCAGTGAAAAGATGACAATATTTGCCACAGTTACGGCAACGACA
ACTGACAATAACGTCGAGACAACGACACAACAACGACAACCAGTACAACC
TAAATTGAGTCGTGCAACACAAAAACCTCATGTCAGAAAGAATAGACGAC
AGTCATCATTGGATCGAAGGCGTGCTCGTTATGCAAGATCGTGAGAGGGT
GGCTCAAGCATTACCATCGCTCCCTTCGAGATATGGTCCCCCAATATCAT
CAACATCATCAAAAACGAAAGTCACGAAAACTGATGAAAACCAAATTCCG
AAAATACCACCACCTACAAAACCAAAACCACGATTGACTCGTTCCAAGTC
CTCCACTCTGCACCATTCCTCCGGTAATAATTCAATCATAAGTCAATCCA
GTGAAAAGATGACAATATTTGCCACAGTTACGGCAACGACAACTGACAAT
AACGTCGAGACAACGACACAACAACGACAACCAGTACAACCTAAATTGAG
TCGTGCAACACAAAAACCTCATGTCAGAAAGAATAGACGACAGTCATCAT
TGGATCGAAGGCGTGCTCGTTATGCAAGCGCGTCGCAGAGAATACGACGG
CCCAAAGTCTCCACGTCACAAAAGAGTTTGACTGACAGCAATTTGAGCAA
CCGCGTCGCAGAGAATACGACGGCCCAAAGTCTCCACGTCACAAAAGAGT
TTGACTGACAGCAATTTGAGCAACCAATCTATATCAATGGAGGAAGTATG
GTCAGCATCCTCAGGCTTTGATGACGACACAAAAGATCGCGCATTCGTTG
AAAATCAATCCGCTGCTCTTCCGCCCATTGCCACTCTCGATTTATCAACT
ACTGAAAACCATACCCCGAAACCACGCACTGCCCGACGTCGATTGCCGAA
AGCTTCTAGCTCAACTGCATGTTGTAACCAATCTATATCAATGGAGGAAG
TATGGTCAGCATCCTCAGGCTTTGATGACGACACAAAAGATCGCGCATTC
GTTGAAAATCAATCCGCTGCTCTTCCGCCCATTGCCACTCTCGATTTATC
AACTACTGAAAACCATACCCCGAAACCACGCACTGCCCGACGTCGATTGC
CGAAAGCTTCTAGCTCAACTGCATGTTGTAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:536338..542399 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1738-1941:205 |
| Aaloc | 1666-1737:1079 |
| Aaloc | 1276-1662:1977 |
| Aaloc | 1144-1272:2572 |
| Aaloc | 1042-1140:2890 |
| Aaloc | 898-1038:3276 |
| Aaloc | 310-894:4347 |
| Aaloc | 214-309:4888 |
| Aaloc | 112-210:5575 |
| Aaloc | 1-111:6063 |
|
