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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000501_pilon:121730..124586+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035658 ID=XLOC_035658|Name=XLOC_035658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2857bp|location=Sequence derived from alignment at sc0000501_pilon:121730..124586+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAAGTaacatttttcattcaaattttggtGGTAATTGGCTCAAC
ATGTTCGACCAGCCAAGTAGGAAATAAAGAAGCATCTTTAGACACGAAAA
GCAGTCAAAAAGTAAGTTCTATAGTTTTACCATTCTCTTAACACGAGCTT
GGAAAACGACCTCTGAGAAAACTCTTACGGcgatctgccaaattaaattc
tcgcctaAATTCATGCtttaaggaaaaatattttgaatggaTTACTTCGA
CGTTGTTCTCAGAGACTAGTGAGCCGCCGCTGGCTCTGTCGAGTACATGC
ACGTACACTGAAATTTAATGACTTTCGTACCCACATCCACAAAATATCAA
TAGATCGTCAAAAGGAGCAAAGATATTTTTATTGTGTCTAAGAACACACT
AAAACACATATCAATCTTTCATAGCAATGTTCTATTCTTTTTCATTAGAA
AACCCTCGCTCATTCACCTGCTTCCACTTGTCGAGCGGGTCGAGACGGTC
GTGATGGCTTGAACGGGCTACCTGGACGAGATGGGGAAGATGGATGCCCG
GGACAAGACGGCAGAGACGGACTACCAGGTGTCAGAGGGCCAGAAGGTGT
TAAAGGTATACAAGGCCGTCCTGGATCAAATGGAACGAAGGGAGACCAAG
GTGTTCCAGGAAAAGGTAAATGTAAAAGATTCAAGTGCAAAAGAATATAT
GTAtgtaattaattttaaagagatCATTAAAAAGTAAGGTGCGCGCATCC
TCTCGGATATGATTGGATatgtacgtactttttgaatggtcccaaaCTCA
AAAACGGGGTggggggggCAAACTATCGAACGGGAATTTTACATACGTTA
TTAAAACATATTAGAGGATATCTTTTTGACTTATTCGTACTCTTTTTATA
ACACATAGAGGATTCCGTTATACtgaaagtaatcaaataaatttcattat
AAGATGGCAAAGACGGTATCAATGGAGTTCCTGGGGTAAATGGAACAAAA
GGCGAGCAAGGCCCTCCTGGAAAAGGTTAGTAAAAATTTCCTTTAATTTC
TGTTACATGTAAAGCatttataagcaaaaaaagttcTTGATCAGATATCA
AAAcacttaaaaataataaatctttCTTATGTATATAGCCTGACAAAGTA
GAAGACAAAACTAGAGGATACTATCGATACCGTTGGATGGATAGTAAACG
AAGGAAAATATGCATGCGTCTAGTAAACGCTCATTACGGcgttttacaga
aaaaaaacgGCAGTAAAGTTTAGCCCTGTGTAAATGACAGGATTGTCTAA
GTTTAAACGAGCATAGACTTTCGCAAATCGTAAAACccatgaaaatgaaa
tattaacGCTAATCAGCATAAAAAGTGACAAACAACTTCTATTATAAAAC
CCCCATTGGTTGGAGGGTTTTCGCGGCGCTTTATTgcatgaatttttgaa
aaatatggcGTAATGGCGTGCAAATCATAGCAGCGTGGTCATGTAATGAA
GATCTTTAAGGTGTTAATTCTGAGGCCAATagctgtttctttttttttta
tttcagatggGTCAATTAGTGGCAGACACTTTAAAGAATGCGCCTGGAGA
TTATCAACACATACAGATACTGGCTTGCTTAAGGTATGGCTTTTatcaat
gttaaaaaaatgatgTATTGATAATAACCATAACAGAGCATTTACTGGTA
TATCATATTAGTGTTTTGAATCCTATGAAAATACCCAGCTTCGAGGAATA
GAGTGCAGCTTGCAGCTGATAGATTAAGGGCTCTGAGCACAGtcaaaaat
tagattttagtatttgaacatgaaagttatgttttaggttctttaacact
tttaacaattAATTGCcgttataaattgctttttagtgAAATTCCTTTTA
AGAGTAATTGAGAatataattgcaaaaatgacgccatgaactttaaaaag
aggttAGAAATATGTTGCATTaccctcttttataaaaagtgataagtttt
aatgggtaattaacctttttgtttcgaagtttttccAAACTGTCCACAAA
GTATTGAACAGTTTTtaaaattaatgcatcaaaagttattagctgttttt
ttctatcaaaaaaaagtttgaatgaaaaattggtcaaaaagcactattta
cAAGGTTTTGTGACAAATAAGCTTTAcgaaaaatgttccaaaaatatatt
ttaagatcAGTAAAATATACATCAACTACCTGAAAAATAATGtttctttg
ccgaaaataagttgttcaaaattgaaatactcttcctcgcaaaagtcttc
attttcttcttcatcaaactttttcactgcgatttttcaattttcaaact
caagGATAATtgacctaacagaaaatgtaaaacATGCAACAGTTTTGTGG
GGTACATCAAGTAggaatttatattttgtacgtggaaaatataaattcac
tatggtcagagcccttaaggccCTCCTTAAGCATATTATTATAGTGGgat
caaaaaagaagaatatttttttggaaagaaattaTTGTCTGTATTTTGAA
GGGATATTTACTGTATgactttttattcaatctttcaaATGAATAGGATT
GCAAGTTCAATAAATCAAAGACCGACTCATACTTAATGGTTTCAATTTCG
TCTAATATATTTCAAGCAACGGGTGGCGCCTGCAGTCGATGGTTTGTCAC
CTTTGATGGAAATGAATGTTCTCCTTACCCAATAGAACATGCGTACTACA
GTAACATTGCGAATACTGACCACATCCCGTTCACACTGAAAGGTATTTGC
AAAATCAACAAATCAGGTGTTGTGAGCGTTGGATTCAACGTTGGGAAATG
TAATGGT Coding sequence (CDS) from alignment at sc0000501_pilon:121730..124586+ >XLOC_035658 ID=XLOC_035658|Name=XLOC_035658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000501_pilon:121730..124586+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAAGTaacatttttcattcaaattttggtGGTAATTGGCTCAAC
ATGTTCGACCAGCCAAGTAGGAAATAAAGAAGCATCTTTAGACACGAAAA
GCAGTCAAAAAATGAAGAAAGTaacatttttcattcaaattttggtGGTA
ATTGGCTCAACATGTTCGACCAGCCAAGTAGGAAATAAAGAAGCATCTTT
AGACACGAAAAGCAGTCAAAAAAAAACCCTCGCTCATTCACCTGCTTCCA
CTTGTCGAGCGGGTCGAGACGGTCGTGATGGCTTGAACGGGCTACCTGGA
CGAGATGGGGAAGATGGATGCCCGGGACAAGACGGCAGAGACGGACTACC
AGGTGTCAGAGGGCCAGAAGGTGTTAAAGGTATACAAGGCCGTCCTGGAT
CAAATGGAACGAAGGGAGACCAAGGTGTTCCAGGAAAAGAAAACCCTCGC
TCATTCACCTGCTTCCACTTGTCGAGCGGGTCGAGACGGTCGTGATGGCT
TGAACGGGCTACCTGGACGAGATGGGGAAGATGGATGCCCGGGACAAGAC
GGCAGAGACGGACTACCAGGTGTCAGAGGGCCAGAAGGTGTTAAAGGTAT
ACAAGGCCGTCCTGGATCAAATGGAACGAAGGGAGACCAAGGTGTTCCAG
GAAAAGATGGCAAAGACGGTATCAATGGAGTTCCTGGGGTAAATGGAACA
AAAGGCGAGCAAGGCCCTCCTGGAAAAGATGGCAAAGACGGTATCAATGG
AGTTCCTGGGGTAAATGGAACAAAAGGCGAGCAAGGCCCTCCTGGAAAAG
atggGTCAATTAGTGGCAGACACTTTAAAGAATGCGCCTGGAGATTATCA
ACACATACAGATACTGGCTTGCTTAAGatggGTCAATTAGTGGCAGACAC
TTTAAAGAATGCGCCTGGAGATTATCAACACATACAGATACTGGCTTGCT
TAAGGATTGCAAGTTCAATAAATCAAAGACCGACTCATACTTAATGGTTT
CAATTTCGTCTAATATATTTCAAGCAACGGGTGGCGCCTGCAGTCGATGG
TTTGTCACCTTTGATGGAAATGAATGTTCTCCTTACCCAATAGAACATGC
GTACTACAGTAACATTGCGAATACTGACCACATCCCGTTCACACTGAAAG
GTATTTGCAAAATCAACAAATCAGGTGTTGTGAGCGTTGGATTCAACGTT
GGGAAATGTAATGGTGATTGCAAGTTCAATAAATCAAAGACCGACTCATA
CTTAATGGTTTCAATTTCGTCTAATATATTTCAAGCAACGGGTGGCGCCT
GCAGTCGATGGTTTGTCACCTTTGATGGAAATGAATGTTCTCCTTACCCA
ATAGAACATGCGTACTACAGTAACATTGCGAATACTGACCACATCCCGTT
CACACTGAAAGGTATTTGCAAAATCAACAAATCAGGTGTTGTGAGCGTTG
GATTCAACGTTGGGAAATGTAATGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000501_pilon | genome | sc0000501_pilon:121730..124586 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-738:2597 |
| Aaloc | 403-477:1559 |
| Aaloc | 331-399:956 |
| Aaloc | 112-327:449 |
| Aaloc | 1-111:1 |
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