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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:186672..190770+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035642 ID=XLOC_035642|Name=XLOC_035642|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4099bp|location=Sequence derived from alignment at sc0000049_pilon:186672..190770+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTGGTCTCAAATACTTGCAACTTTATTTCTATGGATGGTTCATTT
TGAAGATTTGGTGGCTGCCATCTCTTGTGGCAAAATGAGAAAGGTATCGa
taagaaattattttattggGATCGGGTCCGGTTTGAAGGGTCGCTGGTTG
AATTCTTAACCAGTTTCCATTTTACTATTCACACtaaacacccctgtttc
agtgccccggtagaactttttccctcagtggggatgaaaatttctatcaa
aatgccaatgaggatagaaaatctattgtttccagctcgaaaattccagt
ggggatggttttggagtgcaattttttacattcagttttcagtggggata
aagtCATAGAGCAActtcgcagtggggttgaaattgtatgatattttttc
caccgggacgattttttggcctatttttccaccggggtggggggtccacc
gggtctgtgacacaggggtgtcaatAAAAACTGGTAACGAACTTGTCCCC
AACTGGTTAAGAATTCAACCAGCGACCCCTTAAACCAGACCTGATTTCTT
TATTGCTCTTTTAGGCATTTAATGAACAGGAACCAGGaactatttttgca
tttttccaaAAGTGAATGATTAATAAGCATCTTCAAATGAGTTCTTGAGC
TTGATCAACTGAACAATTCATTGCTAATTTCAAACGTTTTCAGATTCCAG
AGAATaatcatggcgttgaaccaatGGTACTAGTTGATCACGGTAAGATT
TAATGTAGAGTGTGAATGGTGAAAAGAAAtgcggaaagaaattttggcgg
ggatttaatttggcggataatTTCAATAACCAAGTCTTGTAATAGAAGTC
ATTGGAAATTTGCTGGACAATGcttcgttttcttcattttaccgTCGATG
GcaagaaaaatattcttatatagcCGAAAATTATAAATAATCTGGCAGAT
GGCTAAACAACTAAAATTTTGGCAGTTGAAGgataatttttgccaaaaaa
cgcTAACAAATACTAAATGTGATAAGGACTGAAATAGCAGACATTAGGGA
ATGAATAAAATAACTTAAATTTAAcgggggatttaatttggcgtttgatg
gaaaaaaataattttggcgggaacttaattttatTTCCTCAAAAATTGCT
TTCCAAAAAGATTATCAAACTCCCGCAATAGTCCAGtggaatttcatcaa
aaataggctcaaaaaaaggctagaaaaaaaattataaaaggtttctatat
accgttggaaagacaattttatcagctttcgaATGCGAATCCTCTTGTTC
TGTATTGACTGTTCTGGGTTTGTTCGATTGTGCTATTTGAATTTTGTGAG
ATTATTTAGCTTACCTACAATCAGAATTCTTCGTTTGAAGTTTTCTTAAT
TTGTAcatagattttcaaaaattcaaaagttcagTAGGTTCCTTTGGGAC
GAGATGTAGTTTTTACCAATGATTTATCCGCGCAGCCTTTatccatagag
gtataaagaaagacaggagatggatttgtcggtaattggtcgttcaagtc
ttttgatttcttttatgtaataaatcaaaagaaattctaggctcgcccga
tgaaatacgactttttagtagaactaaagtttgctctgaacattcttaca
atcagcatcgaagatttctagccttctaatatacgagaataaaataaaat
ttagctccacgaaataagtttgcgttcaattttgtcatccattaaatttt
gttttgaaaagatattttctccagccagaaagtaaaaagttctttataag
cacacacaatttcaaacccaatttgtagacaaaaagtcgctggaaaattt
tggaggaaagtattaagcaatagagatcaccttgaagaaaatgttgatcg
aaaaatcttgtcatttgatgaaggattgcaaagtttacaggccctttttt
aatccaaatattttcttacaccaatgtcagaaacaatgaatctcgtctca
tcttatttccaacatataagttagccaataagatttcacctatcaacaaa
agagctcattaaaaatgcacgatatatgagattatgagcatgcatacgtc
gtaatttttttaatcatagggcgagcatggttacaatagcatacttctcc
tgtttctttatacctccatgctttatcgaaaagtgaagcaagttttggta
ggattttctaccaaagaaatcacgtgacaataacaagcaatttcattggt
ttgagagatgcgaaatagcgtttgccgcggCCTAAtatttttgatctcgc
gctccgaaaacaattaaaatagtagatcctatccatcggcacgaaattta
aaaatttttgcttcacttcttttttctggagaaagcttaagggctctgac
catagtgaatttttgatgattgtcgtgtttaaaatgtgttttctgactga
tgtaaccaacaaaactatggcatgttatacattttatgttagataaacta
ttcctgaatctgaaaatgcaaaaattgcattgaaaaaatttgatgaagaa
gaaaataaaacatttgcgaaaacaaacttttcaactttGAGGAGCttttt
ttAGGCgaagaaaaaaggttttgtgactttccaccaatttttcatcccaa
tttttcgtacaaaaagagtcataatttttgaaacatcaatttagaaaact
tttccgaaaatttttaaatagttcaatCTGTTGCaaacaatttaaaagaa
attcgaaaaaaggGTTAATTACCTataatttttgtaatcaaattgctaat
tactcttgatagaataaattcagaaacaacttataaagacatttttttgt
taaaagtgtcaaggaactcaaaacaaaagttttattttcaaatctcgtaa
ccgatcttttgactatgatcagagcccttaaagttgcctatctagccctt
cgggcttcatGGATCTGtggtttttacaagctcttatttgatttggttgg
tcgttaaccagtaataaaacaattttgttactttttcgaaagaacgcatc
atttttattactttaaatgaCAAATTActaagtatcttataaaaactcca
tctcatctggttACTTTTGAGTGAGAACTTTTTTGCTACTGCAGTTGCAC
AACAGCTGCAACAGTGAGATTTTCCCTTTCTTGATGAAAACTACAACAAA
GCTACAAACCCGCTCATGCATCTCATGTGAGGAGCACAGATCTGTTAGTA
GATGCCGACAGCTTAaagctaacctgataacagctggtcTGGACTTtatt
acgtgcacggtaaacctctaaagacacttaaaaattaaacatctgaggaa
aTAGTCCTCTcacggaaaattctacaacaagaatcttgttgtgcgccgga
aagtcaaaaactaaattttcctgatatggCGCCCTATTTTAAAATGCAAC
TTTAACACAAcccaactttgttgtcattcccagtccttttagacgagcgt
gatccttacgattttgaggtAGCAAATTGGTCAGATTGTTTAAAAACCCa
ttcctttagagcttcagtgtggtgggcagaaaacaaacacaatctgatct
cagatTACCTAAAGCTGAATTTACTCTTTTTCTAGAAGAAGTAATCGAAC
TAAAGACCAAGAGAGTGATACCCGTTTTATCACCTGAATGGAGTTTCCAA
GTGAAATTTAACATCAGTGCAAATCACACAACAACTGATGATTACTGTAG
TATCGTGCATGTTGCTCACAACTCACAGCTATATGGTAAAAGAACGCCAG
CATTATTTTACCAAAGAGTGAACAAAGAATTACTGGTCGATTCAGCTGTA
AATGGTAATAATAAGTATCGAAATAGATATGGTATTATGCTGAACACAGA
ATACAATGTAGAGATTCGGCAGCGTTACAAAAGTGGAGGTGTTTACAAAT
ATTCCATCTTTCTCAATGGAGATGAAGTCCATTCAACCGATAATACACAA
GCTCAACAATTTTATGATGTTACGGTTTATATTTCTAACCCCTGGGTATT
TCCATGTATTGGGGTTGTATCAGAACTTAAAATGACCAACTTTTTGTAA Coding sequence (CDS) from alignment at sc0000049_pilon:186672..190770+ >XLOC_035642 ID=XLOC_035642|Name=XLOC_035642|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1212bp|location=Sequence derived from alignment at sc0000049_pilon:186672..190770+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTGGTCTCAAATACTTGCAACTTTATTTCTATGGATGGTTCATTT
TGAAGATTTGGTGGCTGCCATCTCTTGTGGCAAAATGAGAAAGATGATTT
GGTCTCAAATACTTGCAACTTTATTTCTATGGATGGTTCATTTTGAAGAT
TTGGTGGCTGCCATCTCTTGTGGCAAAATGAGAAAGATTCCAGAGAATaa
tcatggcgttgaaccaatGGTACTAGTTGATCACGATTCCAGAGAATaat
catggcgttgaaccaatGGTACTAGTTGATCACGAAGAAGTAATCGAACT
AAAGACCAAGAGAGTGATACCCGTTTTATCACCTGAATGGAGTTTCCAAG
TGAAATTTAACATCAGTGCAAATCACACAACAACTGATGATTACTGTAGT
ATCGTGCATGTTGCTCACAACTCACAGCTATATGGTAAAAGAACGCCAGC
ATTATTTTACCAAAGAGTGAACAAAGAATTACTGGTCGATTCAGCTGTAA
ATGGTAATAATAAGTATCGAAATAGATATGGTATTATGCTGAACACAGAA
TACAATGTAGAGATTCGGCAGCGTTACAAAAGTGGAGGTGTTTACAAATA
TTCCATCTTTCTCAATGGAGATGAAGTCCATTCAACCGATAATACACAAG
CTCAACAATTTTATGATGTTACGGTTTATATTTCTAACCCCTGGGTATTT
CCATGTATTGGGGTTGTATCAGAACTTAAAATGACCAACTTTTTGTAAAA
GAAGTAATCGAACTAAAGACCAAGAGAGTGATACCCGTTTTATCACCTGA
ATGGAGTTTCCAAGTGAAATTTAACATCAGTGCAAATCACACAACAACTG
ATGATTACTGTAGTATCGTGCATGTTGCTCACAACTCACAGCTATATGGT
AAAAGAACGCCAGCATTATTTTACCAAAGAGTGAACAAAGAATTACTGGT
CGATTCAGCTGTAAATGGTAATAATAAGTATCGAAATAGATATGGTATTA
TGCTGAACACAGAATACAATGTAGAGATTCGGCAGCGTTACAAAAGTGGA
GGTGTTTACAAATATTCCATCTTTCTCAATGGAGATGAAGTCCATTCAAC
CGATAATACACAAGCTCAACAATTTTATGATGTTACGGTTTATATTTCTA
ACCCCTGGGTATTTCCATGTATTGGGGTTGTATCAGAACTTAAAATGACC
AACTTTTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:186672..190770 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 145-606:3638 |
| Aaloc | 94-141:694 |
| Aaloc | 1-93:1 |
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