XLOC_035607 (mRNA) -

Overview
NameXLOC_035607
Unique NameXLOC_035607
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000334_pilon:191805..193265-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035607 ID=XLOC_035607|Name=XLOC_035607|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1461bp|location=Sequence derived from alignment at sc0000334_pilon:191805..193265- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGGGGATAACTTGGAAGATCAAATTCATAGCTTGAGACGCCTAAT AGAAAGACAATCTCTTCGGCTAGAGGAAAAACTAACTTCCCTAGAGGATG AAGTTAAGGAGATCAAAAACAGGTCACCTTCTGGTGGTGGTCAAGCCAAT CAAGGCTTCATTGGTGATGGTTACCAACAGAAAGGAGATATCAATATGGA ATATTTGACAGATCTTGAAGCAAAGAAGGCGTCGACAGAAGAAGATAGTG TCATTGAAAGTCACAAAGATTTTGCGGAAGGTTTAACAATACACGGATTG TCTCGCATTGCTGCAGGTGGCACTGCAGCCAAAGTTTTGTGGACAATTCT GGTTATCGCTTCATTTATTATTGCTGTTCTTATTTCTAAAGAACACTGGA GTGCGTTCCTGGAACATGACAGCCGCACCAGCACTAAGATCGTGTCTCAA TCGAAAGTTCCAATTCCTGCTATCACTATTTGTGACCATACTGCTATCGC CAATGAAAGAAGGCGTTTCAGTGGAGAGCCGCCCCCAGTTAAACGCCCAA CATTAGTTGACTTCAGTATTGTTGACTGCGCTAGAAATCTCACTGCATGC GGCTACAATGGAACAACTTTTGTCAGAGTTCAAAATATTTCAGCCAATTA TGCGCGTGCGTCCCCTCAAAATCACTTGGTGAAGTTTGACGAAACGACAG ATTGTTTTACAATCACTGGTGAAGTACTGGAGATGCCTTCGGACGTACTC TCATACCAAGCCGCTGCTGACCGCCGTCTATCATCAAACGAGTGGACTGA ACTGTACGTGAATTCAGTTGACGAAACCTTTTTCGAGTCATCGGAAGCTG TTTACTGGGCCAGTGAGGGATTTTACTACGTCAACATCGAAAAGAAAATC ATCACACGCCTTGGTCTTCCCTTTACCGAATGTGTTGATGGGAGTGGTCC TTACAGTTTGAATAAATTCAAGGGCAATTACTCAGTCATGAAATGCCAAA AAGGTTGTTTCTGGGAAGCAGTCTTCGAAAAGTGCGGCCAAATACCTGCT ATGTATAAGAAACATATGCGACACCCAGAAAAGTTTGCCAATAAAACCTT TGTTGATGATGAAACTGGACAAGCTTGCTTGAGCATATTGGAGAATGACC ATGCGTTAACGGAAAAATGCGACAACCTCTGTGAGCTGGATCCCTGCTAC GATGAAGATATCAAATTATCGCTTTTCCACAATCCTATGAAGTTAGACCA TTTCCTGGAGTTGGCTTTCACTTTCCAATCCTTTTTGCTAGAGATTGTGG CAGAGAAACCACAATATACATGGCAAGATTTGTTCGCAAATTTTGGTGGA TGTCTTGGATTAATGACTGGATCCTCCATCCTCTCTATCATCGAGTTGAT CATTTTCTTCGGATTGTTCTTCACCAATTTCCTTCGCTCCAAAAAGAAAA ACAATTCTTAA

Coding sequence (CDS) from alignment at sc0000334_pilon:191805..193265-

>XLOC_035607 ID=XLOC_035607|Name=XLOC_035607|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2922bp|location=Sequence derived from alignment at sc0000334_pilon:191805..193265- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGGGGATAACTTGGAAGATCAAATTCATAGCTTGAGACGCCTAAT
AGAAAGACAATCTCTTCGGCTAGAGGAAAAACTAACTTCCCTAGAGGATG
AAGTTAAGGAGATCAAAAACAGGTCACCTTCTGGTGGTGGTCAAGCCAAT
CAAGGCTTCATTGGTGATGGTTACCAACAGAAAGGAGATATCAATATGGA
ATATTTGACAGATCTTGAAGCAAAGAAGGCGTCGACAGAAGAAGATAGTG
TCATTGAAAGTCACAAAGATTTTGCGGAAGGTTTAACAATACACGGATTG
TCTCGCATTGCTGCAGGTGGCACTGCAGCCAAAGTTTTGTGGACAATTCT
GGTTATCGCTTCATTTATTATTGCTGTTCTTATTTCTAAAGAACACTGGA
GTGCGTTCCTGGAACATGACAGCCGCACCAGCACTAAGATCGTGTCTCAA
TCGAAAGTTCCAATTCCTGCTATCACTATTTGTGACCATACTGCTATCGC
CAATGAAAGAAGGCGTTTCAGTGGAGAGCCGCCCCCAGTTAAACGCCCAA
CATTAGTTGACTTCAGTATTGTTGACTGCGCTAGAAATCTCACTGCATGC
GGCTACAATGGAACAACTTTTGTCAGAGTTCAAAATATTTCAGCCAATTA
TGCGCGTGCGTCCCCTCAAAATCACTTGGTGAAGTTTGACGAAACGACAG
ATTGTTTTACAATCACTGGTGAAGTACTGGAGATGCCTTCGGACGTACTC
TCATACCAAGCCGCTGCTGACCGCCGTCTATCATCAAACGAGTGGACTGA
ACTGTACGTGAATTCAGTTGACGAAACCTTTTTCGAGTCATCGGAAGCTG
TTTACTGGGCCAGTGAGGGATTTTACTACGTCAACATCGAAAAGAAAATC
ATCACACGCCTTGGTCTTCCCTTTACCGAATGTGTTGATGGGAGTGGTCC
TTACAGTTTGAATAAATTCAAGGGCAATTACTCAGTCATGAAATGCCAAA
AAGGTTGTTTCTGGGAAGCAGTCTTCGAAAAGTGCGGCCAAATACCTGCT
ATGTATAAGAAACATATGCGACACCCAGAAAAGTTTGCCAATAAAACCTT
TGTTGATGATGAAACTGGACAAGCTTGCTTGAGCATATTGGAGAATGACC
ATGCGTTAACGGAAAAATGCGACAACCTCTGTGAGCTGGATCCCTGCTAC
GATGAAGATATCAAATTATCGCTTTTCCACAATCCTATGAAGTTAGACCA
TTTCCTGGAGTTGGCTTTCACTTTCCAATCCTTTTTGCTAGAGATTGTGG
CAGAGAAACCACAATATACATGGCAAGATTTGTTCGCAAATTTTGGTGGA
TGTCTTGGATTAATGACTGGATCCTCCATCCTCTCTATCATCGAGTTGAT
CATTTTCTTCGGATTGTTCTTCACCAATTTCCTTCGCTCCAAAAAGAAAA
ACAATTCTTAAATGAGAGGGGATAACTTGGAAGATCAAATTCATAGCTTG
AGACGCCTAATAGAAAGACAATCTCTTCGGCTAGAGGAAAAACTAACTTC
CCTAGAGGATGAAGTTAAGGAGATCAAAAACAGGTCACCTTCTGGTGGTG
GTCAAGCCAATCAAGGCTTCATTGGTGATGGTTACCAACAGAAAGGAGAT
ATCAATATGGAATATTTGACAGATCTTGAAGCAAAGAAGGCGTCGACAGA
AGAAGATAGTGTCATTGAAAGTCACAAAGATTTTGCGGAAGGTTTAACAA
TACACGGATTGTCTCGCATTGCTGCAGGTGGCACTGCAGCCAAAGTTTTG
TGGACAATTCTGGTTATCGCTTCATTTATTATTGCTGTTCTTATTTCTAA
AGAACACTGGAGTGCGTTCCTGGAACATGACAGCCGCACCAGCACTAAGA
TCGTGTCTCAATCGAAAGTTCCAATTCCTGCTATCACTATTTGTGACCAT
ACTGCTATCGCCAATGAAAGAAGGCGTTTCAGTGGAGAGCCGCCCCCAGT
TAAACGCCCAACATTAGTTGACTTCAGTATTGTTGACTGCGCTAGAAATC
TCACTGCATGCGGCTACAATGGAACAACTTTTGTCAGAGTTCAAAATATT
TCAGCCAATTATGCGCGTGCGTCCCCTCAAAATCACTTGGTGAAGTTTGA
CGAAACGACAGATTGTTTTACAATCACTGGTGAAGTACTGGAGATGCCTT
CGGACGTACTCTCATACCAAGCCGCTGCTGACCGCCGTCTATCATCAAAC
GAGTGGACTGAACTGTACGTGAATTCAGTTGACGAAACCTTTTTCGAGTC
ATCGGAAGCTGTTTACTGGGCCAGTGAGGGATTTTACTACGTCAACATCG
AAAAGAAAATCATCACACGCCTTGGTCTTCCCTTTACCGAATGTGTTGAT
GGGAGTGGTCCTTACAGTTTGAATAAATTCAAGGGCAATTACTCAGTCAT
GAAATGCCAAAAAGGTTGTTTCTGGGAAGCAGTCTTCGAAAAGTGCGGCC
AAATACCTGCTATGTATAAGAAACATATGCGACACCCAGAAAAGTTTGCC
AATAAAACCTTTGTTGATGATGAAACTGGACAAGCTTGCTTGAGCATATT
GGAGAATGACCATGCGTTAACGGAAAAATGCGACAACCTCTGTGAGCTGG
ATCCCTGCTACGATGAAGATATCAAATTATCGCTTTTCCACAATCCTATG
AAGTTAGACCATTTCCTGGAGTTGGCTTTCACTTTCCAATCCTTTTTGCT
AGAGATTGTGGCAGAGAAACCACAATATACATGGCAAGATTTGTTCGCAA
ATTTTGGTGGATGTCTTGGATTAATGACTGGATCCTCCATCCTCTCTATC
ATCGAGTTGATCATTTTCTTCGGATTGTTCTTCACCAATTTCCTTCGCTC
CAAAAAGAAAAACAATTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035607XLOC_035607-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000334_pilongenomesc0000334_pilon:191805..193265 -
Properties
Property NameValue
Aaloc1-1461:1462