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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000009_pilon:2815917..2820312+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035591 ID=XLOC_035591|Name=XLOC_035591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4396bp|location=Sequence derived from alignment at sc0000009_pilon:2815917..2820312+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGTTGTATGTCTGTTCGGTTTGGTATTGGTAGAATTGAACCACGGATA
CAAAACAGATCATAAAGAGGATGCAAAAGCTGTAACGAGCGAAAATGAAG
ATGCTTTTGAAAACGGTAAGTAAGATTGAACCCAATCTCCGACCAAGAAT
ATAGAACGCAATTTTGTTGTCACACATATAAGACCCCGGAATGGATAGCT
GTCTGGGGCTTACgagttagttcatctaatgtttccagctcacccaaata
gagacttatacgcatgcgtaatttatcgttctttaaacCGCTAgttcgtt
ctttgatagttagggttagggttatgGTTGTCGTTTTTTAATAGTTATAT
TTGTCGTTCTTCTTAGATGGtatggaaacgttagatgaatagTTTCTCAC
AGactatttctttgaattatttttcacgtgactttttattctttttttat
agaaattataAATGATATCGAACTTGATGAAGACTTTGATGAAGAAGAGG
AGCTGagtaaacattttttctttattgtttttttcaacGTAGCCAGAATG
GCAACATTTCAAGGTAGTTGTGTCACACCAGGTCACACCCACAGTGAAAC
TTTGGGGAGGAGAAATACCTATCGAAATCCTAAAagggaatagaaattct
attttgGGTTGTCtttttttCCCATTAAATTTTAAATGAGGATGAAGTCA
ATTTTCTAATGGAGCTGAAATttgggtcccaccgggtctttAGGACATAA
AGTTCCTTGATCTGGGGTGGCAGTTGCTTACATTAATAAGCACTCGCGCG
TAATAGATACTCAGGATAGGGTAAGGGCCCGTCCACATCGACGGGATCAT
CCTTCCTTtaagtccattcgctttaagtgtgcactgaGCCTTGTTTTACC
TGTCATTTGACATCAGGTGGCTTCAAGGTACCTCTCTACCAAAATTGGAG
TTTCTAACATCAaataataaaaagttcttttttttcttctttatttttca
tcttcattttctaaaaattatttttctcagaaattatagtgctctgaaat
atctttttatcttaATATTTATtatcggtatataatatgttcGAATTGGA
TCATTGGTCGGGAAGTGGTAAATAAAAAAGGATCTGTGCACACTTAAAAC
CTCCTTCTAACAGATctggtagaattttttcagccagcggAGATAAATCA
ACgtactgaaactcgatggggattgatttttccatattttttatgactgg
ggatttcaattcttttgttttcaagtcagaaaattcaatggggatgggaa
aaatagttaatattttgcagtgaggattggcttatttgatttttttcagt
ggagATAAGAATTGGAGGAtagttttccaccggggacgatattttggcca
attttcccaGCGGGAAGGGGTctaagtgggtctgtgagaagaggatGTCA
CTTAAAGCGAATACTTTAGTTCACAGCATGTTTAAAAAACTTTgctttta
tttcttcttttcagGTGACATTGCTATCGAACAGCTTGCAGGTAAttgat
gtacacgttttttttataaaagcatccaaaatttttgaagacttcggatg
ttttaaactttttgagttttaatcctGAAAAGGTTATTTGCCTTTGCAGC
GcacaacattttttttgaatcccaaaactttaaaatagcGTTAAAGCTTG
TTGCTTGAGAGTTAGACAATGGGACAATGGTTTTGATaccatttgaaagg
tattttttatactctttctaaaagcattcggtttatgcccttttaaatca
agtggtcaggagccaTCGCCATAAGTCAAAAACTTGGTATATGAGCTCAT
TTTGGACGTTCATATACGTCATTCGGGTCTGAAGGGTtaatatgttatta
ttttcttgcttatttacttaattatttattagctttaaaaattgctctat
ttCGGCTCTGCGAGGGAGAAAAATACACCTTCCTTCTATGTTGTGACGTA
GGTTACGCGGACGAATGAATGTAATGTTGTaagcaatgaagtataagccc
gaagggctagaagtcaatctttttggtaggatttgaacccgggggggggc
actcgattttgaaaggacggtatgtgccgcgcaagatctgcttttcaaaa
tcgtacccttacagtgcagttcaatatggctgaaaaggtacccttttagt
gcattttctcttgatttacccaacccttatagtgcactatatttctcaac
tgtaaatctgcgtgtcagctgtaattattagacagtaaaaaactttttca
aacaaacgagatgtaaaaacctttctttttaacaattattttgaatttgt
tttaaaattcgacccttgcagtgcaatctcacagaaacaccacccttaag
cgcggcacatgacgtaggccagatcatatgagtgacCCCCCggggatttg
aagccaacaaatcctaccaaagttgcgcggtaTGGAGCGGCTCgtctggt
ttttacacaaatgacagattgaaactaaaatttaccgctaaatttcgaaa
aaaatatcaatcgtaaacaaaggaattgctagattcaatctgtcgtcaaa
aatgcggcgcattttttaaggcttcactttttcttgtctgagaaaggtta
gagattaaactctagcccttcgggctttaaactcaatggttgtaAGTCTG
CCCCAGTAAAACAGGAAAAATCTTGTAagaagttttttatattttaccat
ATTAATGGATATTGTGTCAAGTGCCAAGGGCTATACTATCCTTTGTCGTG
attaaataatctttaaaaagctATCTCTTTACGAGCCATCGAGCcttatt
aaagggacataaaagtagtaaaaggtaaacattgtgcgaaccacgtgtca
ttaaagaaaacaattaaaatcacgtatccaaaaacaaacttgtaaaacaa
ttggacaatcaaaattagccatatttggtttgaaaCGTTGAAATTCGTCA
GTatttttatgtccctttaacctggttgcttaaaaaaatgtgtactctCT
CGGGGGAGGGCTCCCTCTTTGCTCTCtttcatttctttaaaaatcacaaa
acctAGTCGCTTAGTCGTACGTCACAAATTTTGTTGCCATGGTGATATAA
AGGAATTATTCGGTATAGAAAATTTCAGAATAAATTATTTAATGGATACG
TGTATTGTGTTAATTCGTGTTGTGCTCTTTACGAATTTAATCTAAAGTTT
CATCGAAAATCACACATATTAATTCTTCTTTAATatattggccatcgaag
ccttattttcttatattttatttatttctttgcatttattcttcattaCA
GATCCTCAAAGGTCAAGGCGACGCCGACGACGCCGAAGAAGACGACGACG
AACCGCCACCGCCactggaacatcgacaaccggaacatcaactggaactg
gaacatcaactggaactggaacatcaactggaactggaacatcaactgga
actggagctggaacaacaGGTATTCTCCCAATAATTCATTAATTATTGCT
TTCCTTCctttttaacctttccagcgcccaacattttcttttttagatgt
gaaaattcaaaatttcaaatcggCAGCATAAAAGATTGTAACTTGAGAGT
TAATATTTTTCTAAGCTATTTTTCATGTGACGTTATAATTAcagttttgt
gacgtcatcgcaaaaatgacaacttgagtTTTTTGTAGCTTTTAGCTTTT
CGAGTTAATTAATTTCGAGATTTTTGTGGTGACGTTACTCACTCGTGACG
TCGTAAAAACtggaattatgacgtcacattgaaaataactcggaaagatA
ACTCGGGAAAGCCAGGCCTCTTATAAATCAAGTGGTCGGGAGTTATAGCC
TTAAGTCTGGGACTTGGTATATTAGGATATTCAGAACGTTTATACACGTC
TGCCGGGGTTTGAAGGGTTAAATCCTTTTTCAAgtataaaagtataaaat
aatAAGGTTCTGAGAAAGTTACTTGATTagttacccagctggcacaaaac
gttgtttcaacgttcatctaacgttatatggacgttatgaacgttaaata
aacgttatatggacgttatgaacgttaaataaacgttatatggacgttat
gaacgttagataaacgttgaaacaacgttgtgtgcctgctggGTAGTGAA
ACAGTGATAACTGTGTTTACTCTCTTTATTTGAATTCACAGGAATCAATG
CAGCCAGAGCTTTATTGGACGCAGAAGCAACCTGTCCAGAAAGACCTGTA
GGGACACCATGTTGCGGATTGGAACGTAGAACCTCTTGTAACAGGACATC
CCGAAGACGAAGCGGAAGAAGACGAGGCCAAAACGGCAAGCGCTAA Coding sequence (CDS) from alignment at sc0000009_pilon:2815917..2820312+ >XLOC_035591 ID=XLOC_035591|Name=XLOC_035591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=966bp|location=Sequence derived from alignment at sc0000009_pilon:2815917..2820312+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGTTGTATGTCTGTTCGGTTTGGTATTGGTAGAATTGAACCACGGATA
CAAAACAGATCATAAAGAGGATGCAAAAGCTGTAACGAGCGAAAATGAAG
ATGCTTTTGAAAACGTTAGTTGTATGTCTGTTCGGTTTGGTATTGGTAGA
ATTGAACCACGGATACAAAACAGATCATAAAGAGGATGCAAAAGCTGTAA
CGAGCGAAAATGAAGATGCTTTTGAAAACGaaattataAATGATATCGAA
CTTGATGAAGACTTTGATGAAGAAGAGGAGCTGaaaattataAATGATAT
CGAACTTGATGAAGACTTTGATGAAGAAGAGGAGCTGaGTGACATTGCTA
TCGAACAGCTTGCAGGTGACATTGCTATCGAACAGCTTGCAGATCCTCAA
AGGTCAAGGCGACGCCGACGACGCCGAAGAAGACGACGACGAACCGCCAC
CGCCactggaacatcgacaaccggaacatcaactggaactggaacatcaa
ctggaactggaacatcaactggaaATCCTCAAAGGTCAAGGCGACGCCGA
CGACGCCGAAGAAGACGACGACGAACCGCCACCGCCactggaacatcgac
aaccggaacatcaactggaactggaacatcaactggaactggaacatcaa
ctggaaGAATCAATGCAGCCAGAGCTTTATTGGACGCAGAAGCAACCTGT
CCAGAAAGACCTGTAGGGACACCATGTTGCGGATTGGAACGTAGAACCTC
TTGTAACAGGACATCCCGAAGACGAAGCGGAAGAAGACGAGGCCAAAACG
GCAAGCGCTAAGAATCAATGCAGCCAGAGCTTTATTGGACGCAGAAGCAA
CCTGTCCAGAAAGACCTGTAGGGACACCATGTTGCGGATTGGAACGTAGA
ACCTCTTGTAACAGGACATCCCGAAGACGAAGCGGAAGAAGACGAGGCCA
AAACGGCAAGCGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000009_pilon | genome | sc0000009_pilon:2815917..2820312 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 346-498:4244 |
| Aaloc | 214-342:3354 |
| Aaloc | 187-210:1517 |
| Aaloc | 133-183:455 |
| Aaloc | 16-129:1 |
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