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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000009_pilon:2963651..2967757+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035583 ID=XLOC_035583|Name=XLOC_035583|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4107bp|location=Sequence derived from alignment at sc0000009_pilon:2963651..2967757+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACATGCACATAGACAATCAACCAAAATGGCTTCTGCAGGCGCCCTCCT
CTTAAAACAAAAAGTCCCATTCGTCATGGAGCTAGACGGTCAAATTAACG
AAATCAAATTCTCAGTCCGGGGCAAGGGGACAGGGGACGCAACAACTGGC
ACCATTGACGCCAAATTTGTATGTACCACTGGTGAATTGCCAGTACCGTG
GGCTTCAATTTCGAGTGCGATGTCATATGGAGCTCTGTAAGTATCACAGT
ACTCTTAGAGGGGAAGAAAGGTCCTATTCCGAAGATTATACAATTTCCCC
CAGAAAGACTCTTCTACACTTTACAGATCATCTAACTAATGACGcaatgt
ttcgagctccaacccttaccctaactgataagatcaaaataatcaaaaat
cgaaaatatcgaaaaggtcaaaaaggaagaataaaaaagtCCACTCCAGA
AGCAATTACCCCGAGATTACTTATTTCCCAGAAAATAGATACTACCTGGT
ACCCAGAATGGTTGTAACCCCTCTGGGAAATTATTACTCCCTGCTGaaaa
aaaTCTTACTTCTATAATAAAAGTGGACATCCTTAAAAGAAAGACAGTCT
TTGTAACTTTCGTTTGCTaactgaaatttttgaaaggtttttatgctttt
cagaaaaaacaggCTTTCTACTTTTTATACTATCTTGTCACTGAgatacc
cagctgacacacaacgttgttttaacgttaatACAAGAAAGTCTAAGTGG
CGTAAAGACCCAGCAGTGTTAGCACTGTCAGCATATTTTTCCGCTGCAGA
ATCACCACAAAACAGGGGCAAACTTATTCAATTTATTGACTCGAGTCGGG
CGAGAAATAAAGATTTAATTACTTTACTTACCTCTGACCATAGTCgtgaa
attgattttagtatttgaacataaaagttatgttttaggttctttaacac
tttcaacaaagaattgcctttataaattgctttttaatgaaatcccttaa
gagtaattaagaatttcattgcaaaaatgacgttatgaactttaaaagga
cgttaataatatgttgcatcaccttcttttataaaaagtgctaagcttta
atgggtaattaacctttttgtttttttcaaaatgtccgcaaagaattgaa
ctgttttacatttttcggaaaatttttctaaattaatgcatcaaaagtta
tggctgtttttctatgaaaaattgggatggaaaattggtcaaaaagcact
attttcaagattttgaaggaaacaagcttttagaaaaattttccgaaaaa
ataattttagttcaataaaagatacaccatataccgcaaaaaaaatttca
aaatgttttttcttcgccgaaactaagctcttaaaagttgaaatactctt
cacTACAAAAGTCTTTATTtgcttcttcatcaaATTTTTTCATTGTGATT
CTTAAATTTTCAGACTCAAGGATAATTGGCCTAACAGAAAATGTATAACA
AGCCACAGTTTTGTGGGCTACATCAAGTAGAACTTTATATTTTGTAAGTG
GCAAATTTATGGTCAGAACCCTTAAAGGCCCATTGCGCTGCTCTGTTTGG
CCAATAACGTTGTGAACATTAGATAAACGGGGGATAAACGTTAAAACAAC
GTCTAGGCAATGCGACTAACGGTCTTCATGAAACACGCGTTTATTCTTTC
AGCTGTTTCACCAAATATCCAGTCAATATTAAAGATTTCTTCAAATCAAC
CCTTCCTGACGGTTATATTCAAGAAAGGACTATTAGCTATGAAAATGATG
GTTCATGGAAAGTTCGTGGTGTAATCACTTACGAACATGGTTCCATTTAC
AATCGCGTCACACTTAAAGGAGAAGGATTCAAAAGAGACGGACACATCCT
TCAAAAAAGATACGACTTTTGCTGTCCGAATAATGCAGTTTACGTTTTGC
CGGATAAAGAAAACAACGGACTCCGAGTTGTTTTCAATAAGGTTAGCTTT
TTCACCTTTGTCAATTactctcccgggggggggggtacttaggttTGTGA
GATGATAGATATGTtcgagccaaagttcgaaaatcaaccctttCGAAAAT
TTCGTCcatttttcgacatttttgcCAGCCCTTGAGAGAGCaaagcaaaa
tttcagccaacaTTTTTCAGCCaacattttttataactttAATCCAAATT
TCCAGAATTTATGATCCTTTGAGTCAAACattgattttcgtaattttagA
ACCATTTTACAGGGGCTCTATTgattttttatggttttttttaCCCCTTT
TAGGAACTTTAGAGGGAGTGAAAAAAGGATCCTTATGGGTTGCACcaacc
cagcacctattttgcCTAGTACCCACCCCTTCCCTTCCAGTTTCAACTGA
ATAATCATTAACAACCTTCAAGTACAAAATCTTCCTTTTCGctatcaaaa
acaatgaaaatatttgtaaaataccaTTATCTACAATCaccgccgaaata
tattggtaattttgggtattttaaacacccctgtctctgtgccccaGTGG
GTGTTGAGTACCCAGTGGGGTGAGAATGAAAAAACCTGAAATTCACTGGG
GTAAAAAATCTTCGTTCAAATATTGAGTGGGTGGCGAAAATTTCATTGAC
ATTCACTGGGggtgagaaagaattttttgcatgagctaaattttggttct
gttagacgaaaaccgcttaaTTATTATTCGTCTAACAATTCTATCGTGTT
TTAACGAtggaaggtactggctaactTTTGGTCTAGTCAAAATCTGCTTC
TTACATGCTACTAAAGTAGAAATATCATCTTGATCAGGTGGATATACTCT
CACAGCACTGTAACAGGTAATGTAATGAGGTCTGGGGGAAGGGGGCTATA
GAGGAGCAGTATggttatatcaaattttataaactCTGGGACCTAGCAAT
GTTTAGTCAACATGGTTAAAGTAGAGGTCTTTCTTTCAGTATCTACGCAA
GTGAGAAAGCCTCTCTTTTGAGGCTAGAACCTAGCTTTTAAGAAAGAAAG
GGCCAAGTACAACCGTGGTTTGCGCtgacagagaaatttttgattttcag
ccCCTCTCGTTTGGCactttccacgttttaaaatgacCATAGAAGTCGGG
TTGAATACAGTAAATATATTTAAGTGGAACATTTGATGGCgagcgagcga
agcgatcaaattttttttggttttttcggatatttcactttaaaaaaagg
ggaaGTAGAAAATTCTAGCGGGgcgattttttgaaagaaaagttctaCTG
GGGTACGTTAAAACAAGGGCTTTTCGAGTGGGGTATGtgtaaacttttta
tcattttcaatggggtgcttttttactacaacattccagtggggtgagtg
atttgtccagtggggctgaaaaatgagccatttttggaaaaataattcac
TGGGGTGACCAGTGGAGTGGATCCCATTGGGTcacagaggcaggggtgtt
tttaacgtttttcagagaattgcagtttcagtacttccactttgcttcat
tgaatttttcgatttgggaagGGTTAAGTGACtcccaggctatattctca
accttattggaacatttttgagcttttataTCCTGAGTCATAAGTCTGAT
GTTAAAGCTCACAGTTAAAATTCTACTTGCTTACTGTACTTCAATGCaat
taaaaatcacttgcagttttaaagttttgagggaatttcccttttgtgtc
aaatatttcggcgccgattgtagtTATGCAACTGGACACACTTTACACCA
TTTCCAGCTGCGAAGACACCTAATTAAAAAGGTTCGAGTTAGACTTTAAA
TTCACAACATTATTGCAAAATGGAGTTTCTAATTTTGTTATACATTCGCA
TAGGCTTTCAAATTGAAAGATGGAGGATACCATTGTGCTAAGCACGAACA
ACAAAATATTCCACTCGGCGGAGGAATCGTTGATATCCCAATTTATCATC
ATCTTCATGTTGGAAACATATTCTCGAAGGATCTCGAAGAAACACGTGAC
CACTTGTGTTTGATTGAAAAGCTCACAGCTATAGATCTTGAAACATACAA
TAACTGA Coding sequence (CDS) from alignment at sc0000009_pilon:2963651..2967757+ >XLOC_035583 ID=XLOC_035583|Name=XLOC_035583|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1458bp|location=Sequence derived from alignment at sc0000009_pilon:2963651..2967757+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACATGCACATAGACAATCAACCAAAATGGCTTCTGCAGGCGCCCTCCT
CTTAAAACAAAAAGTCCCATTCGTCATGGAGCTAGACGGTCAAATTAACG
AAATCAAATTCTCAGTCCGGGGCAAGGGGACAGGGGACGCAACAACTGGC
ACCATTGACGCCAAATTTGTATGTACCACTGGTGAATTGCCAGTACCGTG
GGCTTCAATTTCGAGTGCGATGTCATATGGAGCTCTCAACATGCACATAG
ACAATCAACCAAAATGGCTTCTGCAGGCGCCCTCCTCTTAAAACAAAAAG
TCCCATTCGTCATGGAGCTAGACGGTCAAATTAACGAAATCAAATTCTCA
GTCCGGGGCAAGGGGACAGGGGACGCAACAACTGGCACCATTGACGCCAA
ATTTGTATGTACCACTGGTGAATTGCCAGTACCGTGGGCTTCAATTTCGA
GTGCGATGTCATATGGAGCTCTCTGTTTCACCAAATATCCAGTCAATATT
AAAGATTTCTTCAAATCAACCCTTCCTGACGGTTATATTCAAGAAAGGAC
TATTAGCTATGAAAATGATGGTTCATGGAAAGTTCGTGGTGTAATCACTT
ACGAACATGGTTCCATTTACAATCGCGTCACACTTAAAGGAGAAGGATTC
AAAAGAGACGGACACATCCTTCAAAAAAGATACGACTTTTGCTGTCCGAA
TAATGCAGTTTACGTTTTGCCGGATAAAGAAAACAACGGACTCCGAGTTG
TTTTCAATAAGCTGTTTCACCAAATATCCAGTCAATATTAAAGATTTCTT
CAAATCAACCCTTCCTGACGGTTATATTCAAGAAAGGACTATTAGCTATG
AAAATGATGGTTCATGGAAAGTTCGTGGTGTAATCACTTACGAACATGGT
TCCATTTACAATCGCGTCACACTTAAAGGAGAAGGATTCAAAAGAGACGG
ACACATCCTTCAAAAAAGATACGACTTTTGCTGTCCGAATAATGCAGTTT
ACGTTTTGCCGGATAAAGAAAACAACGGACTCCGAGTTGTTTTCAATAAG
GCTTTCAAATTGAAAGATGGAGGATACCATTGTGCTAAGCACGAACAACA
AAATATTCCACTCGGCGGAGGAATCGTTGATATCCCAATTTATCATCATC
TTCATGTTGGAAACATATTCTCGAAGGATCTCGAAGAAACACGTGACCAC
TTGTGTTTGATTGAAAAGCTCACAGCTATAGATCTTGAAACATACAATAA
CTGAGCTTTCAAATTGAAAGATGGAGGATACCATTGTGCTAAGCACGAAC
AACAAAATATTCCACTCGGCGGAGGAATCGTTGATATCCCAATTTATCAT
CATCTTCATGTTGGAAACATATTCTCGAAGGATCTCGAAGAAACACGTGA
CCACTTGTGTTTGATTGAAAAGCTCACAGCTATAGATCTTGAAACATACA
ATAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000009_pilon | genome | sc0000009_pilon:2963651..2967757 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 526-729:3904 |
| Aaloc | 238-525:1704 |
| Aaloc | 1-234:1 |
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