|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000334_pilon:144097..146121- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035581 ID=XLOC_035581|Name=XLOC_035581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2025bp|location=Sequence derived from alignment at sc0000334_pilon:144097..146121- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGATACTGAACCGACACAAGAAACTGAATTAGAAGCTGAATATGTTGA
CTCTGAAGTCAAGCTTGACGAAGAGCAGACTAAATCTAACGTCGACAAAG
ACTCTCTGAGCATCGAAAATGAAGAGCAGACAGGAAAAGAGAGCAAAGAT
CCTGAATCCATTCAAAAAGAATCTGACGGTATCGAACTTGATGAGATGGT
CGACTTCAGAAAATCACCGGGGCCTGAAAAATCAAGTGATAGTGGTTTTG
AATCTAAACAAAACACTTTCATCGTTGAAGAAAAGCAGCAACGAAACCCT
GTTAGCAGTGAAAAAGGTGTAGATGAAGGTTTCAAGGATGCTGTCGATGA
AGCTGTCGATGAAGCTGAAGAAGTCCTCACTGAAGCCGACCCTGTATATC
AAGAACTAAAAGCAAAGCAACAGACAGTATCAATTGAAGAATCCAAAGAA
GGCTCTGCTCCTATTGACCAGACAGTTGTTTTATTCGGTCCTACTATCAG
CATTGGTACCGATCCTATAGAACAAGAGCCAAATGAAAAGCAAGTTGAAA
CAGCCTCAATTGAAGAGGTCGAGAAGGTGCAAACACAAGACGCCGAAGAA
GTCTCCTTAGAAGTTGAAGACTCAGAACCTCAAGTTACCCAAGAAGCTAA
AGAGCCTATTCAAGACAACAATGTGATGGTTCTTGAAGAAGTTCCACAAG
AGCCAGTAGAAGTTCCACAAGAGCAGGAAGAAGTTGCAAAGTCCTCAAAA
CAACCGCCAAAGTCACCTCGTGAGAAGAGAGAAGAAGCGATAAGTCAAGC
TTTTGACAACATCGCTAAAGCTATTGATGATGCCAAACACACTGTTATGG
TCATGGAGGAGACAGAACCAGAACCTCAAAAGGTGGCCCTTGAATCCTCT
CAGCCTGACATTCTAGAGATTGAAACTGCTGAGGATATTGGTGAGCTTGA
GAAAGCTGGCTTGGTGAATCGTGAAGCTAAAGTGGTGCAATTTCCACGTC
AACACGTTATGTCGTCTGACGTTCAAAGTCCTGACGAGAATATTTCTGAA
TCTGTAGAATCAACAGAGTCCCCCAATGATGTCAATATTTCTCCAGAAGT
TTTGGATGCCGGTGATGCCCAGGAAGATGTTAGAGGTCTAGATGTCATTG
ACGAGACTCCTGAAAGTCTTCCTGACAAGAGTGAGTCTGTTGCGGTAGAG
GTTTTACAGAAGGTGGTTGAAAACTCGGAGACGCTTCTAATAAAAGAGGT
TGAAAAGCTTGTGCAGACTGAAAAAGAAAGCGGTTCCATTGAAGCAACTT
CAACTAAGGAAGATTTCCCTGTCGAAGCTATTGATAAAACCTGCACGGAA
GATGCTCCTGTTATTGAACATGCCCCTTCAGTAGAGAACAAAGAAAAAAC
CGAATCTCCTGACGAAAAAACAGAAGCTCTCGACGAAAAGATCGAAGCTC
TTGACGAAAAAGAAGAAGAAGCTCCACAGGCTTTTGATGAGGAGCCAAAA
ACTCCTCCGCAAACTCAAAGTGTTTCCTTACCTGTTGCCCAGTCAACACC
GATGAGCGCTGATCACAAGGAGCGATCGCTCAGCATTTCACGACAACGGA
AAGATAGTTTGTCTGACAACAGTGTTAAAGGCGACGTGGGTCGTAGTGAA
GAGACTGCAACGATTGCTCAACTCCTTGCTTTCAAAAGTGAAGAAGAAGA
AAAACGCAAGTCTCAAGAAGATGCTGAGTTGAAAGCCTTCAAGGCTGAAG
TCGAAGAAAGCGTGCACGAAATGGCTACCAAAGAACACGAGGAAAATGAA
AGATCAGATTCTGTGATGGTGGCTTTCAAGGAGGACTTGGAATCAACGGT
TGATAAAGAAAACGTTTTGGAAGTTTCTGCTATCGCTGATGATGAAGGTA
TTCCAAAGGAGATGAAAAGTGTGAATAACACTGCTTTCGATTCTGGAATA
GTTGACGAGACTTTTGATCAAACAATCAAGGAGGAGAGTGCTGATCAAAC
CCTTGATGAACAATTGAAAGCTTTT Coding sequence (CDS) from alignment at sc0000334_pilon:144097..146121- >XLOC_035581 ID=XLOC_035581|Name=XLOC_035581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4050bp|location=Sequence derived from alignment at sc0000334_pilon:144097..146121- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGATACTGAACCGACACAAGAAACTGAATTAGAAGCTGAATATGTTGA
CTCTGAAGTCAAGCTTGACGAAGAGCAGACTAAATCTAACGTCGACAAAG
ACTCTCTGAGCATCGAAAATGAAGAGCAGACAGGAAAAGAGAGCAAAGAT
CCTGAATCCATTCAAAAAGAATCTGACGGTATCGAACTTGATGAGATGGT
CGACTTCAGAAAATCACCGGGGCCTGAAAAATCAAGTGATAGTGGTTTTG
AATCTAAACAAAACACTTTCATCGTTGAAGAAAAGCAGCAACGAAACCCT
GTTAGCAGTGAAAAAGGTGTAGATGAAGGTTTCAAGGATGCTGTCGATGA
AGCTGTCGATGAAGCTGAAGAAGTCCTCACTGAAGCCGACCCTGTATATC
AAGAACTAAAAGCAAAGCAACAGACAGTATCAATTGAAGAATCCAAAGAA
GGCTCTGCTCCTATTGACCAGACAGTTGTTTTATTCGGTCCTACTATCAG
CATTGGTACCGATCCTATAGAACAAGAGCCAAATGAAAAGCAAGTTGAAA
CAGCCTCAATTGAAGAGGTCGAGAAGGTGCAAACACAAGACGCCGAAGAA
GTCTCCTTAGAAGTTGAAGACTCAGAACCTCAAGTTACCCAAGAAGCTAA
AGAGCCTATTCAAGACAACAATGTGATGGTTCTTGAAGAAGTTCCACAAG
AGCCAGTAGAAGTTCCACAAGAGCAGGAAGAAGTTGCAAAGTCCTCAAAA
CAACCGCCAAAGTCACCTCGTGAGAAGAGAGAAGAAGCGATAAGTCAAGC
TTTTGACAACATCGCTAAAGCTATTGATGATGCCAAACACACTGTTATGG
TCATGGAGGAGACAGAACCAGAACCTCAAAAGGTGGCCCTTGAATCCTCT
CAGCCTGACATTCTAGAGATTGAAACTGCTGAGGATATTGGTGAGCTTGA
GAAAGCTGGCTTGGTGAATCGTGAAGCTAAAGTGGTGCAATTTCCACGTC
AACACGTTATGTCGTCTGACGTTCAAAGTCCTGACGAGAATATTTCTGAA
TCTGTAGAATCAACAGAGTCCCCCAATGATGTCAATATTTCTCCAGAAGT
TTTGGATGCCGGTGATGCCCAGGAAGATGTTAGAGGTCTAGATGTCATTG
ACGAGACTCCTGAAAGTCTTCCTGACAAGAGTGAGTCTGTTGCGGTAGAG
GTTTTACAGAAGGTGGTTGAAAACTCGGAGACGCTTCTAATAAAAGAGGT
TGAAAAGCTTGTGCAGACTGAAAAAGAAAGCGGTTCCATTGAAGCAACTT
CAACTAAGGAAGATTTCCCTGTCGAAGCTATTGATAAAACCTGCACGGAA
GATGCTCCTGTTATTGAACATGCCCCTTCAGTAGAGAACAAAGAAAAAAC
CGAATCTCCTGACGAAAAAACAGAAGCTCTCGACGAAAAGATCGAAGCTC
TTGACGAAAAAGAAGAAGAAGCTCCACAGGCTTTTGATGAGGAGCCAAAA
ACTCCTCCGCAAACTCAAAGTGTTTCCTTACCTGTTGCCCAGTCAACACC
GATGAGCGCTGATCACAAGGAGCGATCGCTCAGCATTTCACGACAACGGA
AAGATAGTTTGTCTGACAACAGTGTTAAAGGCGACGTGGGTCGTAGTGAA
GAGACTGCAACGATTGCTCAACTCCTTGCTTTCAAAAGTGAAGAAGAAGA
AAAACGCAAGTCTCAAGAAGATGCTGAGTTGAAAGCCTTCAAGGCTGAAG
TCGAAGAAAGCGTGCACGAAATGGCTACCAAAGAACACGAGGAAAATGAA
AGATCAGATTCTGTGATGGTGGCTTTCAAGGAGGACTTGGAATCAACGGT
TGATAAAGAAAACGTTTTGGAAGTTTCTGCTATCGCTGATGATGAAGGTA
TTCCAAAGGAGATGAAAAGTGTGAATAACACTGCTTTCGATTCTGGAATA
GTTGACGAGACTTTTGATCAAACAATCAAGGAGGAGAGTGCTGATCAAAC
CCTTGATGAACAATTGAAAGCTTTTGAAGATACTGAACCGACACAAGAAA
CTGAATTAGAAGCTGAATATGTTGACTCTGAAGTCAAGCTTGACGAAGAG
CAGACTAAATCTAACGTCGACAAAGACTCTCTGAGCATCGAAAATGAAGA
GCAGACAGGAAAAGAGAGCAAAGATCCTGAATCCATTCAAAAAGAATCTG
ACGGTATCGAACTTGATGAGATGGTCGACTTCAGAAAATCACCGGGGCCT
GAAAAATCAAGTGATAGTGGTTTTGAATCTAAACAAAACACTTTCATCGT
TGAAGAAAAGCAGCAACGAAACCCTGTTAGCAGTGAAAAAGGTGTAGATG
AAGGTTTCAAGGATGCTGTCGATGAAGCTGTCGATGAAGCTGAAGAAGTC
CTCACTGAAGCCGACCCTGTATATCAAGAACTAAAAGCAAAGCAACAGAC
AGTATCAATTGAAGAATCCAAAGAAGGCTCTGCTCCTATTGACCAGACAG
TTGTTTTATTCGGTCCTACTATCAGCATTGGTACCGATCCTATAGAACAA
GAGCCAAATGAAAAGCAAGTTGAAACAGCCTCAATTGAAGAGGTCGAGAA
GGTGCAAACACAAGACGCCGAAGAAGTCTCCTTAGAAGTTGAAGACTCAG
AACCTCAAGTTACCCAAGAAGCTAAAGAGCCTATTCAAGACAACAATGTG
ATGGTTCTTGAAGAAGTTCCACAAGAGCCAGTAGAAGTTCCACAAGAGCA
GGAAGAAGTTGCAAAGTCCTCAAAACAACCGCCAAAGTCACCTCGTGAGA
AGAGAGAAGAAGCGATAAGTCAAGCTTTTGACAACATCGCTAAAGCTATT
GATGATGCCAAACACACTGTTATGGTCATGGAGGAGACAGAACCAGAACC
TCAAAAGGTGGCCCTTGAATCCTCTCAGCCTGACATTCTAGAGATTGAAA
CTGCTGAGGATATTGGTGAGCTTGAGAAAGCTGGCTTGGTGAATCGTGAA
GCTAAAGTGGTGCAATTTCCACGTCAACACGTTATGTCGTCTGACGTTCA
AAGTCCTGACGAGAATATTTCTGAATCTGTAGAATCAACAGAGTCCCCCA
ATGATGTCAATATTTCTCCAGAAGTTTTGGATGCCGGTGATGCCCAGGAA
GATGTTAGAGGTCTAGATGTCATTGACGAGACTCCTGAAAGTCTTCCTGA
CAAGAGTGAGTCTGTTGCGGTAGAGGTTTTACAGAAGGTGGTTGAAAACT
CGGAGACGCTTCTAATAAAAGAGGTTGAAAAGCTTGTGCAGACTGAAAAA
GAAAGCGGTTCCATTGAAGCAACTTCAACTAAGGAAGATTTCCCTGTCGA
AGCTATTGATAAAACCTGCACGGAAGATGCTCCTGTTATTGAACATGCCC
CTTCAGTAGAGAACAAAGAAAAAACCGAATCTCCTGACGAAAAAACAGAA
GCTCTCGACGAAAAGATCGAAGCTCTTGACGAAAAAGAAGAAGAAGCTCC
ACAGGCTTTTGATGAGGAGCCAAAAACTCCTCCGCAAACTCAAAGTGTTT
CCTTACCTGTTGCCCAGTCAACACCGATGAGCGCTGATCACAAGGAGCGA
TCGCTCAGCATTTCACGACAACGGAAAGATAGTTTGTCTGACAACAGTGT
TAAAGGCGACGTGGGTCGTAGTGAAGAGACTGCAACGATTGCTCAACTCC
TTGCTTTCAAAAGTGAAGAAGAAGAAAAACGCAAGTCTCAAGAAGATGCT
GAGTTGAAAGCCTTCAAGGCTGAAGTCGAAGAAAGCGTGCACGAAATGGC
TACCAAAGAACACGAGGAAAATGAAAGATCAGATTCTGTGATGGTGGCTT
TCAAGGAGGACTTGGAATCAACGGTTGATAAAGAAAACGTTTTGGAAGTT
TCTGCTATCGCTGATGATGAAGGTATTCCAAAGGAGATGAAAAGTGTGAA
TAACACTGCTTTCGATTCTGGAATAGTTGACGAGACTTTTGATCAAACAA
TCAAGGAGGAGAGTGCTGATCAAACCCTTGATGAACAATTGAAAGCTTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000334_pilon | genome | sc0000334_pilon:144097..146121 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 628-2046:1420 |
| Aaloc | 451-621:1591 |
| Aaloc | 361-450:1687 |
| Aaloc | 10-348:2026 |
|
