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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1046075..1048874- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035579 ID=XLOC_035579|Name=XLOC_035579|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2800bp|location=Sequence derived from alignment at sc0000043_pilon:1046075..1048874- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTGATACAGAATAATTATTTGACGAAAAGAAATATTGAATTTCT
TTTCATTGCATTTATTTTGGTCAATGCACAAATTTCAACAGTAGACACTT
TGACAGCTCCGGCAATCCGAATGCTAGGTAGAAGAATCACAGCGGTAAGT
AGAACAGTGTAGTGGTCAAAGCGAGTTTGAACTTTGCAATGGTTTTGTTG
TCGAAACTTTGAAATTTCTACCCCAAAAGTCAATGGTTTTCCTAGATAAA
ACTAAAAGTACCACAGAAGAAATCAAGTATACTTACTCAATCTCGATTTC
ATTACCATTGAAGAAATTTTTCTAAGATTGCATTTTTTTTCCTCCAAAAG
TTGAAAAAAACAACAAAATTATCACAATTGATTTTGCTCATCTTCAAAAA
AAGAATTTCTAGGATGTTTTATGGAAAACTAAGGCATAGGTCAATGGGAG
CCGAGTATTAACAAATTTTTCGTCTAAAACGGAAAATGGATTTTACAAAG
CAAATTAGCACAGCTTCTTCAATGAAGTTTTGGTGAATTTTTTACAGAAT
TGTTAAAAATCAACCTCGCCCCCGTGTATCCCAGACATTATTTACGTTAC
TTATTGACACCAGAGAATACCCTGGTGTTGGCTGAACGAGTTATTATAGG
GTATTATCTAGCGCTATCAGTAACGATAAAAAGCTGATTTTACGCAGGAA
ACGAGGTTGGTTAAACATTAAAGCCATTTCATATACCGTAACTTGGTCTA
ATGTCGACATCCCTCATCTAATTCCAACACCCTTTTTATCAGCTGAAATA
GAAAGGTCAAAACAGTTTTTCTTTGCTTAGTGGTAACAGAGTAATAATCC
TTTTTCAATCAGTGATTCAGGCTTTCATATTTTCCTGTCTCTAGAAGAGG
GATGTCGGCATTAGACCAACTTACGGTACTTCCCTAAGACGCAAGAACTT
TCAACACTGACTTTAGATGTGGAAGAATGGCGAATATAGATGACAAACTC
TGAGGAACAATACAGATACGAATAAAGGGGGGGGGGAATTTTCTTTCTGT
AAACAATCACCCTAAATTGTTGAGGTATTTCTTTTTTGTGATCTCTCAAA
CACCCCCTTCTCATAGACCCGGTGGGATTTTATCAGCGAGTGGGGGTAAA
AGTAACGGACCAAAACTCGATAGGGATTGATATTCCCATGTTTTTATGGC
TGAGGACTTGAATTTCAATGTTTTTTAGCTAGAATGGGGATGGAATAAAT
AGCAGAAGATTTTACAGTGAGGATTTGTTTATTTGATTATTTTAAGCAGG
GAAAAAATTGGAGTATAATTCTTCACTGGGACGATTTTGGCCAATTTTTC
TAGTGGGAAGGCTTCCCAGTTGGTCTGTGAGAAGGGAGTATTCTCACTAA
TATATTGGCTGACAATATATTGGTGTAGTGTAGTGGAGCTCTTTGGATTA
ATCTTTGGACTCGGGAAAGTCTGTTGAGTCTGGTGGGAATCATAGCTAAT
CAAAATTTGCTCTAATATAATTCGAAACTTATGAATCTAAACAAATTATT
TGATCTGCAGGATTTAATTAATCGATTTCCTCTATGAAGAAAGATAAGCT
TTGATTAACATCTACATAAAAACCAGATAAAATTAATCAGAACAGAAATC
AAAAACCCCCAACCGATCCATCTGGATTTTAATCAAGAAATTGAAAACAA
GAGAGGGATACAAACTCAACCAATATTAGAAACAGTTCTCTCAGTTCATT
CTAAAGGAAAGAAAGAAAAATCAGTTTTCACAGGAACGATTAATCTTAAA
GTAAAATTTCTGAAATGCTTTTATCCTAATACGAACGGAACGTTATTTCT
GCAACACTTATCTGTACGCAGCTGGCACACAACGTCATTTCTACGTTTAT
CTAACGTACACAACATCCATATAACGTTAGATTAACGTTTAAACAACGTT
GTGTGCCAGCTGGGTAGTGCTTTGAGTGCAGAGATAGAAAACGTTAAATC
AAGGACCTGGAACGTCAAAGATAAGAAGCTTATCCCATCATAGCCTGTAC
TTTCTGTAGCTCTTCTTCGCTGACTGAAAAGATAACGCGAAGTTCGGTTT
GTTACGGTTAGGCAACATTCCGTATTTAAGAAAGTTTGCAACCGCAGTCG
AGGGCGACCCGAAGACTTCCTTTTCCTTAGCTGTCTACCCGAACGTAGGC
GAGGGCGCTACTTCTTTCCCTGGATTGCTCCACTTACCCTTGATCCGTCC
CTTTAGTTGCTGAGCATCAAGCAAGAGGCATCAGGTACCATTTTAAAAGT
CTTTGGTATGACGTAGCTTGGGCTCAAACTCACAAACTTGCACACTATAG
TGCCGTAGGTAAAGCATGCAGCTTAGTAGCGCAAGGATGTTGGTTCAACT
CTCAGCCGGGTCATACCAAAGATTCACAAATGGTACAGAGAAAAGGGAGC
CTTCGGATCGCCCTCGACTGTGGTAGCAAACTTACTTACTATAATAATGA
TTAAGTTGTGATTTTATAAAACACTGGGGATCCAACTAAAATTATTTCTT
TTAACTTTTCTTACAGAGAATGCGTTTGGAGCAGATGTGCGCTCTCCTAA
AAGGAGGTTGCAATGAAATCTATAAATATTCAAGTTTGAGGAAACGAGGA
CGGGATTTGGGCGACGCAACAACCAGGCGAGAAATTGAGCAACATGAGAT
GAGAAGAAATATTCCTCTAAGGTATAAACTACGGAAAAGAACACTGGAGA
GTCTTTTACGGAAACGAGAGAACTTAAAATATGTCGTTGTGGAGTACTGA
Coding sequence (CDS) from alignment at sc0000043_pilon:1046075..1048874- >XLOC_035579 ID=XLOC_035579|Name=XLOC_035579|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000043_pilon:1046075..1048874- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTGATACAGAATAATTATTTGACGAAAAGAAATATTGAATTTCT
TTTCATTGCATTTATTTTGGTCAATGCACAAATTTCAACAGTAGACACTT
TGACAGCTCCGGCAATCCGAATGCTAGGTAGAAGAATCACAGCGATGAAA
CTGATACAGAATAATTATTTGACGAAAAGAAATATTGAATTTCTTTTCAT
TGCATTTATTTTGGTCAATGCACAAATTTCAACAGTAGACACTTTGACAG
CTCCGGCAATCCGAATGCTAGGTAGAAGAATCACAGCGAGAATGCGTTTG
GAGCAGATGTGCGCTCTCCTAAAAGGAGGTTGCAATGAAATCTATAAATA
TTCAAGTTTGAGGAAACGAGGACGGGATTTGGGCGACGCAACAACCAGGC
GAGAAATTGAGCAACATGAGATGAGAAGAAATATTCCTCTAAGGTATAAA
CTACGGAAAAGAACACTGGAGAGTCTTTTACGGAAACGAGAGAACTTAAA
ATATGTCGTTGTGGAGTACTGAAGAATGCGTTTGGAGCAGATGTGCGCTC
TCCTAAAAGGAGGTTGCAATGAAATCTATAAATATTCAAGTTTGAGGAAA
CGAGGACGGGATTTGGGCGACGCAACAACCAGGCGAGAAATTGAGCAACA
TGAGATGAGAAGAAATATTCCTCTAAGGTATAAACTACGGAAAAGAACAC
TGGAGAGTCTTTTACGGAAACGAGAGAACTTAAAATATGTCGTTGTGGAG
TACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1046075..1048874 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 286-375:91 |
| Aaloc | 214-282:160 |
| Aaloc | 145-213:235 |
| Aaloc | 1-144:2801 |
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