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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000009_pilon:2713520..2717024- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035566 ID=XLOC_035566|Name=XLOC_035566|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3505bp|location=Sequence derived from alignment at sc0000009_pilon:2713520..2717024- (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAAATCAAGGTAATGTGAAAAATTTAATTATCAATATCTATTGATCT
TAATTGATCTTACTTTCTAGATTCAATCCTTGGTGCAAATAATCTCAAGA
CTTCACTTTCTCTTGCCTGAGGAAGGTCGATGGTACACCTTTTCGACTGT
AGCCACCAATTGCCGCACGGGAATTTTTGTGTCCGCTTTATCCCACTAAA
ACCGTCCCAGTCCTTTTTTCGCACCTAAAGACAATAGAAAAATGCGTCAA
AAAAGGATTGGGACGGTTTTAGTGGGATGAAGCGGACAAAAAAAATGCCG
GCGCGACTACGGTCGAAAACGGGATTAAAACTCGTTAGTGAAAGAAGCTT
TCAAAAAATGAATAAAGTCTACTTACTCCCGAGCACGAGATATTCATGAT
GCGACACACTTTTTTATCCAAAACTTTTGCAGCCTTCGGATGTTCTTCAA
CTTTTTGAGTTTTAAAGCCTAAAATGTTCTTAAAATGTTCTTATTTTCAA
GATTTTGTGAGCAAGTTTGTCTATTTTCAAATTGGGTTCGTTTCTGCAAA
AAGGTGTTTGGCAAAGCCTTAAAAATATTCTTAACTTGTTCTTAATTTTT
TGGCCATCGAAGCCTTATGTTCTTATTTAGTTTGTTCTTATAGAAAAACG
TGTACTTTCCCTTTTAGGTAATATCAAGTGAAATTTCTGTTGAAGTGTTC
TTCAAGAAATACCTGAACCCTAACAAAACATTATCCAATCAAGAATGCTG
TAGACCAAAAACAACATTCTGTAGAATTGCATGCGAAAATACATTCTTTA
TATGTTTGGGTACCAATTGTACAGTTGGTGTTGGTGATATCAAAGTCAAC
AAAATTGCCCTTGAAGATGAAGAAAAATTTAAGACGGGGGTTGATGAGAC
AAGACTGCAAAATCCTTTCCCTGTGAACCTCCCGTTAGGATTCATGAAGG
TAAGCCGTTTTCACTTTATTTTTTAAGGATATATTGGTATTTTGAAATAG
AAATCGAGCTATCTATCAGGATATTTCACAAGGGTGACCCTTTATAAATT
GATATGAACATTTTTGATGAATAGGCTTTTCCAGAAAAAGTATGTACCAC
TAATGTTATAAAACACGCCTAAAAAATTATCAAATTCTGGGGCACTAACA
ACTTCAAAACTAGTCATTTTATAGTCATACAATTATAGATTTCAAAAAGG
GAGATTTTCAAAGGAGAAACTTGCTTCATTTATATAATCGTATTTCAGGA
CAAAATCTTGATGTCAATCGGGGTATTTCACCAAGACACTAACCTAGTGG
CGGAATTCAACAACATCGAAGTAAAAATTGATAAATCCTCAAACTGGCAA
GACATGGGTACACTACGAACAGTGGAATCCAGAAGATATATCAAATTCCA
AAAATTACTGGCCATCGAAGTAAGGTAAACCTGCATTTCTTTCAAAGAAG
ACAAATCAAAGCTAATTCATTTTGCCCCTGTGTCACAGACCCGGTGGAAC
CCCCTATACACTAGAAAAATTAGTTAAAATGTCGTCCCCATAGGGAAATT
ATTCCAAAATTTCAGCCCCATTATAAAATTTTATTGTTTTTATCTTTGTT
TTATCTATTCATTGAAATTCACTGGAAAGAAATTGCACTCCAAAAACATC
CCCACTGGATTTTTTGACCTGAGAAAAATAGAATTTCTATCTCTATTGGA
ATCTAGATAGAAATTTTCACCCACTGTGGGAAGAAGTTCCACTGGGGTCA
TGAGATAAGATTGTGTCAAAAAATCAATCTGTCAAGTCAATAACAGATCC
CTAAGCCTAAAGCTCTTTAAGTTTTCATCCCAAATCGGGTATCAACTGAT
CCTCTTACGGAACTGGTGTGGTAATGAGGATCTGCTCGGAGAGAAAGAAG
TAAGGCCTTCTGTTGTATTTTAAGGACGAAATGTAGCACTGATTATACAG
GCGAATGGTGTGATATCAAAATTTGCACACCACGTGACGATACAATGGGC
CATTATAATTGCACCAAAGATCACCAGAAAGTTTGTTTAAAAGGATGGTT
CGATCCTTCTACAAATTGCACTTTAAGTAAGTGAATTAATAATATGTCAC
AAAATCCCTGAAAAATTACAAAATTAATCTGCTTAATTGATGGTAAGGCT
GAAGAAATTTACAATGCTACTTTGATCTTATGGGGACACCCCGTGGGTTC
TAAACCATTATCTAGAACACCATGGGACACCCCAATGGAACTACCTGTCT
GCTACCCTTGTCGACCAGCGGAGCATCCCCGTAACCCTTCTTGCCCTAGT
ACCCCCCCCCCGGGCCTTTCGCCTCAGTTTTGTTTCAAATGTCTTCTGTG
TGTGTACCAATCGATGCAGAATTTCACAAACATTTAAAATATACAATAAA
AAAGCAAGCGAAAGTATTTGTATCAACAGTAGTTATGGTCCTTTGGAAAT
TTTGACTCCTCTGCTCGATTTGAACAGTTTTTGAGGTTTTTGAAATTTTC
ATTAAGCCCTTTAAAACTCTTTTTCTGTCATCGAAGGCAACCCTCTAACA
ACTCGCAAACCATCACCGACGACAATTCACACAACCATAACAACTACACA
AAGCATTCCACCACAGAGAGAAAAAAGTGGTCGGAACAATAAAGATGGCG
GTGGTAATAGTGATAAACAGATGACCGAGTTCGCAATCATTTTCACAAGT
TTATTCGCAGGTCTTATTGCACTGGCAGTGATCTTGATTCTTGTGAAGAA
AAGGTAACATCTTGCAACATCGTTTTTCAACATTTACTACCTACGATGTT
TTAGACAATTTTCGATTTCTTTTAAGATGGAAAAAAGGGAGCTCATGAAC
CAAACCTGTCTCCTTGCATTATGAGACACTTTTTTTATAAGAACCAGAGA
AATTTTTGCTGAGGTTCGGCTGTTATTTTTTTTAGCACTTCGAGCCCAAA
ATTGTTCTTATCCTGTTCTTATTTATAGGATAGGGTGTAAATGATGAATT
CTGGACGTTATTTTTTAAATCATTCTTATTTTTTTGGCGATTTTGAGCCT
CATTTTTCTTATAAAATTGTTCTTATACACTCTATCTTCATGCCAAGAGA
ATATCAACTTTGGTACGAGTTTGAGTCATTGAGGGCTCTTCCAGAAAATG
TTCCTACAAGAGGGGGGTGGAGGATATAGTGTCCAGGGGGTAGTGAAAAA
TCTACAAAATTTGCCTTGTCCTGGGGGTAAAGTTTCTCTGTTTTAGGGTA
ATTTTGAATGTCCAAGGGGTCAACTGATGCTTGTCCAGGGGGTTACAAAA
AAGTCACAATGTCCAGGGGGTAAATTTCTCAGAAATCTTATATCCTCCAC
CCCCCCCCCCCATATTCAAATCTTTTTCTGGAAAAGCCCATTCTTTCAAG
AATTTTCTTTTTTATATTCTCAGAATGAAGTCCATGGCAACCATTCATTC
GTTCGAGCAACCTTCAGAGTCAAGCCATTCATCGTCAAAGGCGAATGAAT
GTGTA Coding sequence (CDS) from alignment at sc0000009_pilon:2713520..2717024- >XLOC_035566 ID=XLOC_035566|Name=XLOC_035566|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1842bp|location=Sequence derived from alignment at sc0000009_pilon:2713520..2717024- (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAAATCAAGTGGAAAATCAAGGTAATATCAAGTGAAATTTCTGTTGA
AGTGTTCTTCAAGAAATACCTGAACCCTAACAAAACATTATCCAATCAAG
AATGCTGTAGACCAAAAACAACATTCTGTAGAATTGCATGCGAAAATACA
TTCTTTATATGTTTGGGTACCAATTGTACAGTTGGTGTTGGTGATATCAA
AGTCAACAAAATTGCCCTTGAAGATGAAGAAAAATTTAAGACGGGGGTTG
ATGAGACAAGACTGCAAAATCCTTTCCCTGTGAACCTCCCGTTAGGATTC
ATGAAGGTAATATCAAGTGAAATTTCTGTTGAAGTGTTCTTCAAGAAATA
CCTGAACCCTAACAAAACATTATCCAATCAAGAATGCTGTAGACCAAAAA
CAACATTCTGTAGAATTGCATGCGAAAATACATTCTTTATATGTTTGGGT
ACCAATTGTACAGTTGGTGTTGGTGATATCAAAGTCAACAAAATTGCCCT
TGAAGATGAAGAAAAATTTAAGACGGGGGTTGATGAGACAAGACTGCAAA
ATCCTTTCCCTGTGAACCTCCCGTTAGGATTCATGAAGGACAAAATCTTG
ATGTCAATCGGGGTATTTCACCAAGACACTAACCTAGTGGCGGAATTCAA
CAACATCGAAGTAAAAATTGATAAATCCTCAAACTGGCAAGACATGGGTA
CACTACGAACAGTGGAATCCAGAAGATATATCAAATTCCAAAAATTACTG
GCCATCGAAGTAAGGACAAAATCTTGATGTCAATCGGGGTATTTCACCAA
GACACTAACCTAGTGGCGGAATTCAACAACATCGAAGTAAAAATTGATAA
ATCCTCAAACTGGCAAGACATGGGTACACTACGAACAGTGGAATCCAGAA
GATATATCAAATTCCAAAAATTACTGGCCATCGAAGTAAGGACGAAATGT
AGCACTGATTATACAGGCGAATGGTGTGATATCAAAATTTGCACACCACG
TGACGATACAATGGGCCATTATAATTGCACCAAAGATCACCAGAAAGTTT
GTTTAAAAGGATGGTTCGATCCTTCTACAAATTGCACTTTAAGACGAAAT
GTAGCACTGATTATACAGGCGAATGGTGTGATATCAAAATTTGCACACCA
CGTGACGATACAATGGGCCATTATAATTGCACCAAAGATCACCAGAAAGT
TTGTTTAAAAGGATGGTTCGATCCTTCTACAAATTGCACTTTAAGCAACC
CTCTAACAACTCGCAAACCATCACCGACGACAATTCACACAACCATAACA
ACTACACAAAGCATTCCACCACAGAGAGAAAAAAGTGGTCGGAACAATAA
AGATGGCGGTGGTAATAGTGATAAACAGATGACCGAGTTCGCAATCATTT
TCACAAGTTTATTCGCAGGTCTTATTGCACTGGCAGTGATCTTGATTCTT
GTGAAGAAAAGGCAACCCTCTAACAACTCGCAAACCATCACCGACGACAA
TTCACACAACCATAACAACTACACAAAGCATTCCACCACAGAGAGAAAAA
AGTGGTCGGAACAATAAAGATGGCGGTGGTAATAGTGATAAACAGATGAC
CGAGTTCGCAATCATTTTCACAAGTTTATTCGCAGGTCTTATTGCACTGG
CAGTGATCTTGATTCTTGTGAAGAAAAGAATGAAGTCCATGGCAACCATT
CATTCGTTCGAGCAACCTTCAGAGTCAAGCCATTCATCGTCAAAGGCGAA
TGAATGTGTAAATGAAGTCCATGGCAACCATTCATTCGTTCGAGCAACCT
TCAGAGTCAAGCCATTCATCGTCAAAGGCGAATGAATGTGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000009_pilon | genome | sc0000009_pilon:2713520..2717024 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 841-921:82 |
| Aaloc | 625-837:968 |
| Aaloc | 472-621:1581 |
| Aaloc | 295-468:2258 |
| Aaloc | 13-294:2839 |
| Aaloc | 1-12:3506 |
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