XLOC_035562 (mRNA) -

Overview
NameXLOC_035562
Unique NameXLOC_035562
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000009_pilon:2786736..2788162-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035562 ID=XLOC_035562|Name=XLOC_035562|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1427bp|location=Sequence derived from alignment at sc0000009_pilon:2786736..2788162- (Clytia hemisphaerica_ch_hm2_pilon)
TTGATACGTCTGTTTATAATAATGGTAGCTGTTATCCAGGTAAGAGCTTC GAGGCGTATACTGCCGTGATCTGACAAAAGGAAGTAACCATCAATTTTTG AAAATTCATATTTTTGCAAAAATCAACTCCTAAGAGTCCAGTTTGTGTTT TCCAGTAGTCGATTTCTAGTAAAAGACTTCTTTTTATCGATTTTTTTTGG ACTAAAGTTTCATTTTATTTTCTGACAAAAGGATTACTTCCACTTACTTC TACTTCGTCACTTACTTCTTTTTATAGCCTGAAAAATGAAAATTGCTTGC AATATTTTGCAGTTTATTTTCTGACAAAAAGAAGTAACTTTAAAATTTTT AGCCTGAAAGAGCTTGAGTAGAGTAAGACTATGTTCAGACGTTACGGTTC CGTTCCGTTCTGAAACGAAACGGTTGTTTTGAAACAAGTGTGAACGTCAA AATTGGAAACGTCAAAAAAAAAAGACGTTCCAAAGCAAAACAGATCGAAA CGGTTTCGCTCCACTTTCTAATATATATAATAATATTTAATAATATTTCA AGTAATCTTTTTCTAGATTACATCAGCTGAAATTATTCTCGAGATATTAT TTGAGGACTATTCAAATCCTAACAATTGGTTGGCAACTCACGAATGCTGT TACGATAAGCTATCAACTTGCAGGGTGTCGTGTGACAATACATTATCAAT GTGTGTATCAAGTGACCTCAATAAAGGATCTTGCGGTCTTGGATCTGTTA CAATCAACCCTAAATATACCTTCAGAGACGATGAGAAAAGATTTTTACAA GGCAAAGACGAATATAGGTTTCAAAATCCGTTCAACCACAAACTTGGAAA AGGAATTAAGGAGGTAACTGCTGATAAATGTGTTTCTCTTAAAGGATGTA CTGCAGCGACTATAGTGCAATAGTAGAGCATCAAGCTACGGTGCACATGA TCTTGGCTTCAATCCCCGGCAAGGTCACACCTCTCTGTTTGATTCTTAGC AATTAAGAAAAGAAACAAGGGTAAGTGAAGCAATCTAGGGAAAAGGAGTG GCACCATCCGCTTCCTCCATGTAGATAGTTTTAAAAAGAGGAGCCTACAG ACCTTCTAATTTACTTTCTAAAAGAGAACACTAGAGGTATTCATTCCCTA AAGTATGAAAAAGTCCACCAAAAAAAACCGTATAATCAACTACAAGTGTT CTTTTTTTATGCAGAATACTTTTTAAATTCACTTCAATCTATTTTTATAG GACAAGCTGTCCCTTGATTTTAGGGTAGTACACAGTGGCACAGAAAATGT CGCAGATTTCAAAGATATTGAAGTCAAAGTCGATACTGGTTCACCATCCA ACAGTTGGCAAGTCCTGGGAACTGTTAAGACGGTAGAAGGAAGAAGATGG AAAAGATCTGCTAAAAAATTGACCCTG

Coding sequence (CDS) from alignment at sc0000009_pilon:2786736..2788162-

>XLOC_035562 ID=XLOC_035562|Name=XLOC_035562|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000009_pilon:2786736..2788162- (Clytia hemisphaerica_ch_hm2_pilon)
TTGATACGTCTGTTTATAATAATGGTAGCTGTTATCCAGTTGATACGTCT
GTTTATAATAATGGTAGCTGTTATCCAGATTACATCAGCTGAAATTATTC
TCGAGATATTATTTGAGGACTATTCAAATCCTAACAATTGGTTGGCAACT
CACGAATGCTGTTACGATAAGCTATCAACTTGCAGGGTGTCGTGTGACAA
TACATTATCAATGTGTGTATCAAGTGACCTCAATAAAGGATCTTGCGGTC
TTGGATCTGTTACAATCAACCCTAAATATACCTTCAGAGACGATGAGAAA
AGATTTTTACAAGGCAAAGACGAATATAGGTTTCAAAATCCGTTCAACCA
CAAACTTGGAAAAGGAATTAAGGAGATTACATCAGCTGAAATTATTCTCG
AGATATTATTTGAGGACTATTCAAATCCTAACAATTGGTTGGCAACTCAC
GAATGCTGTTACGATAAGCTATCAACTTGCAGGGTGTCGTGTGACAATAC
ATTATCAATGTGTGTATCAAGTGACCTCAATAAAGGATCTTGCGGTCTTG
GATCTGTTACAATCAACCCTAAATATACCTTCAGAGACGATGAGAAAAGA
TTTTTACAAGGCAAAGACGAATATAGGTTTCAAAATCCGTTCAACCACAA
ACTTGGAAAAGGAATTAAGGAGGACAAGCTGTCCCTTGATTTTAGGGTAG
TACACAGTGGCACAGAAAATGTCGCAGATTTCAAAGATATTGAAGTCAAA
GTCGATACTGGTTCACCATCCAACAGTTGGCAAGTCCTGGGAACTGTTAA
GACGGTAGAAGGAAGAAGATGGAAAAGATCTGCTAAAAAATTGACCCTGG
ACAAGCTGTCCCTTGATTTTAGGGTAGTACACAGTGGCACAGAAAATGTC
GCAGATTTCAAAGATATTGAAGTCAAAGTCGATACTGGTTCACCATCCAA
CAGTTGGCAAGTCCTGGGAACTGTTAAGACGGTAGAAGGAAGAAGATGGA
AAAGATCTGCTAAAAAATTGACCCTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035562XLOC_035562-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000009_pilongenomesc0000009_pilon:2786736..2788162 -
Properties
Property NameValue
Aaloc337-513:178
Aaloc40-336:862
Aaloc1-39:1428