|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000334_pilon:148375..152505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035552 ID=XLOC_035552|Name=XLOC_035552|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4131bp|location=Sequence derived from alignment at sc0000334_pilon:148375..152505- (Clytia hemisphaerica_ch_hm2_pilon)
TTACCAAGTCCTATATTCACATCTAGGTAAGCCAATCTGCTCAATTTGAT
AGCCCTATCGTAATGGAATGATACGAGTTTGTAAAACAGCAGGTTGTTCT
TATTTTGTTTTAGGGTTTCGCCAAAATCGAGGCTCAAGGTCTTATATGGT
TAATCTTAGTTAATCTTATAAAAAGCGAAGAAGTAAAATTTTGTAAACCT
TTAAAATCATCTGCTAATTCGAAAGAGTTGCCTTATTGTCATGACAGTGG
AGTTGTGTCGTTTTCACTGTTTGATACTTTTACCTAAGTTTAAAGGTCAA
GAGGCTTCTCTTAGCAAATCGCTTTTCTGTCAATCACTCTTTTCAGGAAT
TTTAACTTGTGCAGACAAATTTTCTCCATCAAATGTTGTGATTTCTCATT
TCGCTCTCTGTCAGGAAAGTGTTACTTTTCTGGAGAATTTCCCCCAACCA
GCTATCTGCACCCGAGTTTCAGAGAATCTACTCCACATATTTCTAACGAA
ATGTAATCTAAAGTATTTTGTCAGAGGGAGTACACGTTATTTTTAAGAAA
CACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAATTAAGAAACAT
CTAAGAAACATGGTGAGACTGAGAATGACAAAGTAACATTTTTTAATTCG
GTTATTTAAAGAACCTTCCAATCAAAACAAACCTTCCAATCAAAACAAAC
GTGTTTTTTTCTTTGCATGAAAAATAGGCTGATTATCAAAAAGTTTAGAA
ACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTTCTTAAGAAACATT
GAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAACGCGTACGAAGAAA
GATGTAATCTTTTCCGTTCTGTTGTATCTTATGTCACAGAGGGCGGCTTG
TTCAAAAACCTACATGGAAAAGGGGATTCGAATTTCACACATATTCTCTA
TGAAATTTTCCCCGAATACATCTCGATTCTATCTATGACTTTAAATCTAT
GATTAGCCCTCAGGTCTTGAGTCCAGCTAGCAACTATATGAGGAACTAAA
TATTGCTCTGCATTTAGGTTTGTTATAGTTTTAGGCTATCATTTATAAGG
TTAAGGTTACTAGCTCATCATACCACAGTCAAATTTTTATTATAAAATAA
GTGATGGGTTACATTTCGTATTAAACTAGGTGATAAAAATGCTGAAATTT
AATACCTCCTTTCACATCATTTGATATAGTTTTTAGTTCTTTTGAAAATG
TTACTTTTGCATTATAAGTTTTGTTTCAACACTTGATAAATTGTTATGTT
GCCTGGCGTCTAGTGGAAATTGTAGTATTTTGGACTTGAATGATTTTAAT
TAAAAAGGCAAGTCCTCATTATTGTGCCCTTTGTTTGCTTTGTTAATTTT
TTATAATTTTTGACTAAGTTTTAATATTGATAGACTATTCGGATAATTGC
TTGTATCATTTAAAGCATCATAATATAATCCAATAGCCATAATTTCCTCC
CCCAAAAATTTAGGGGGTCTTCAAATTCTCAGACAACCCTAAAAGGGGGG
GGGTCGAAAAAGCCACAATTAATAGGGGGTTGTCCTTTAGTGGGGGAGGG
GGGTTGGTTGGTGATTTTAAAATTTTTAACCAAATAATTTAATCTTCTAT
CTCGGTTATTAATTTATATATAGAGTGGTTTTGCCTTTAGGGGGGGGGTT
GATTATAGGGTGGCTATGTAAACTATGATAGCACTTTGTAACATTTTACT
GGGCAAGGTTGAGTGCTGTTTAGAAGATATACACAAAATTGAGTAACCCC
TGGATTAAAGGCTATGTATATTATGAGCAAAAGCATACTGTGCAAATAAG
CGATAGGGTATTATTAGAGAGAAAAATGTCTTTTTTTCCCTTGGAGTTAT
AGAAAAGTCTCAAAATCAATCGGATTTGTTTTTCTCTATTTTTCAACAAT
TTGTTCCAAAATATTTTGTCAACTCATTGAGCCAGATCATTATCATGTAT
TGAAACTCAAGACTTTGTTAAAGATCTGTTTTGTTGTAAACAAAAATCAC
CCTGGGAAACTAGTAACAAGTGTCATGTTAAAACATCACCAAAATGTACT
TCAGAAAGTTTTTGTGCGATCACACTGCATGAATTATAATTTTCTTTAAA
AAAGGTTACCCAATCTCCCTTAAAGTTTGAAAGCAATGAGTTATTCAAAC
AAATCATTAAAATATTAAACTTTCAGGGATTTTGTTACATTTTAAAAGAA
TTTTAAGATAAAATTTCAAATGCATGAATTAGCATAATTAAATGATTTAG
CCAATCAATTTAATACTCCCTCTAAATGTTTCTTTCTTCCTAAAGAATTG
TCACAAAAACACCAAAAAGTGACAGTTTCTTTTCCATTGTTACTAAATAA
AAACTGACAAAATAAATAATTCTCTATGGCAACCAGACTGTTTCTGGTAA
ACAAAATATTTAAAGGATTTTATTGATCTTTCGGTGAGGAAGGTTTTATT
GGATTTGATTTACTCTTTTTTGGAATTTGTGTTTTTAAAATCTTTTTAAA
TTCGGTTGAAATTGTAGGTAAGCAAAACGCAGATTTGTTGCTTCAACTCT
TTTTTTTGCAATTTTATTCAAGTATTTACAACAATAAGTTTCTTTTAACT
AGGACAATCTTGAGAATGATTTTAGAATTTTATCTAAAATGTTAGTCAAA
ACCAAATTTGGGTAACCCCCTTTGATAAAGTTCAAAAAGAGAACTAGAAT
TTTTGAAATAAGGGCTTGAAGGTCAATAAGACATACGTCACAACTATATT
GGGTTTTGCGGCGAAGATATTTGCTTTCCCCGGAGATTCTTCCTAAAATT
TTTTTTCAAAATTAAACTTACAATTTCATTTGTTCTACTGTTATAGCCCT
CTTATTGAAGGGGATTGAAAATTTGTGTATAGGTCCTTCTATTAGAGGAA
ATAATGGAAGGAATTTCCTGAAAGAAGACTTTTGCATCGAGATCTGCATA
TTGCGAAGAGATACACGTTTTTTACAAGAACATCCTTATCGAATGTTCTT
ATCTTTTTGAGTTTCAAACCTTAAAATGTTCTCAACGTGTTCTTATTTTT
ACAAATTTGTGAGTATTTCGGTCAATTTTCATAAGAAATCGGGTGTTTGG
GAGTCCCCAAAGCCTTAAAATGTTTTTGCTCTTACGAATTTTGTTCTTAT
TAAAAAAATGCGTATTCAATAAAAATTTAGTTTCGCGTATGAAACTTTAA
CTGCTAAACTAAAGATTAATATTTTTATTTTTACAGTCGTTATTACGTGT
TACCGCCCACGACGCCTGAAGGATCACCCGAACCCAATGACGTCACATCT
TCTATCATTGATGACACAGAAAGGTATTCCCAGTCTTTTGATTTCTTTAG
AAAAAAATACTCCTGTATAACACAACTTCAGAATCATGAAATTTGTTGGC
CCTATCATCACAGTTTTCAGCACTTATGCCAGGACCTAGATGGATGGGGT
TGTGAACGACTTTACGTCAATTGCATTACGTCAATTGCATAAGCTTACTC
ACATATACATAGTTAGACATTATTCATCCGAAGTACAATCAAGCTTAGTA
CACCTGCTGCGTTAAGGTCCATAACGAGAAAATTTCTTGAAGCGGCTTGA
ATGATGGAGAATTTTCAAGTATCTAATACATTATTTCATTTTTAGTATTT
TACTGACCAATGAAGAAGACCAACCACCCAAAAGACACATGAAGCAAATC
AGTGTCGAACAAAAACTCTCTGACGAAGAGGGAGTCACTCCTTTAGAAAC
TTCTGACATCACAGAAGTCAGTGATGTGGAAGAAACCAAGTTTGTTACTA
TGGTGACCAAGGAAATGCAAAATGGTAGCAAAGATGTGGTTGTGACGAAA
TCTTCACATCCCGAGAGGAGAGCTGGTAAAGAAGAGACTACGGTTATCGA
AAAGACAATTATCCTTGAGCCGAAAGACCAGTCAAAGGAATCAGAAAATG
AAGACAAAATAGAGACGAAAATTCAGACAGAAACCTCTGTTACGTTAATT
GATGAAGAATTCAAAACACAGGAAGGGGAGAATAATATGCTTTCCGAGAA
GGAAGATGAAGAAATGAAACCAAATAAAGAA Coding sequence (CDS) from alignment at sc0000334_pilon:148375..152505- >XLOC_035552 ID=XLOC_035552|Name=XLOC_035552|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0000334_pilon:148375..152505- (Clytia hemisphaerica_ch_hm2_pilon)
TTACCAAGTCCTATATTCACATCTAGTTACCAAGTCCTATATTCACATCT
AGTCGTTATTACGTGTTACCGCCCACGACGCCTGAAGGATCACCCGAACC
CAATGACGTCACATCTTCTATCATTGATGACACAGAAAGTCGTTATTACG
TGTTACCGCCCACGACGCCTGAAGGATCACCCGAACCCAATGACGTCACA
TCTTCTATCATTGATGACACAGAAAGTATTTTACTGACCAATGAAGAAGA
CCAACCACCCAAAAGACACATGAAGCAAATCAGTGTCGAACAAAAACTCT
CTGACGAAGAGGGAGTCACTCCTTTAGAAACTTCTGACATCACAGAAGTC
AGTGATGTGGAAGAAACCAAGTTTGTTACTATGGTGACCAAGGAAATGCA
AAATGGTAGCAAAGATGTGGTTGTGACGAAATCTTCACATCCCGAGAGGA
GAGCTGGTAAAGAAGAGACTACGGTTATCGAAAAGACAATTATCCTTGAG
CCGAAAGACCAGTCAAAGGAATCAGAAAATGAAGACAAAATAGAGACGAA
AATTCAGACAGAAACCTCTGTTACGTTAATTGATGAAGAATTCAAAACAC
AGGAAGGGGAGAATAATATGCTTTCCGAGAAGGAAGATGAAGAAATGAAA
CCAAATAAAGAATATTTTACTGACCAATGAAGAAGACCAACCACCCAAAA
GACACATGAAGCAAATCAGTGTCGAACAAAAACTCTCTGACGAAGAGGGA
GTCACTCCTTTAGAAACTTCTGACATCACAGAAGTCAGTGATGTGGAAGA
AACCAAGTTTGTTACTATGGTGACCAAGGAAATGCAAAATGGTAGCAAAG
ATGTGGTTGTGACGAAATCTTCACATCCCGAGAGGAGAGCTGGTAAAGAA
GAGACTACGGTTATCGAAAAGACAATTATCCTTGAGCCGAAAGACCAGTC
AAAGGAATCAGAAAATGAAGACAAAATAGAGACGAAAATTCAGACAGAAA
CCTCTGTTACGTTAATTGATGAAGAATTCAAAACACAGGAAGGGGAGAAT
AATATGCTTTCCGAGAAGGAAGATGAAGAAATGAAACCAAATAAAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000334_pilon | genome | sc0000334_pilon:148375..152505 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-549:436 |
| Aaloc | 28-111:845 |
| Aaloc | 1-24:4132 |
|
