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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000242_pilon:433888..438838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035538 ID=XLOC_035538|Name=XLOC_035538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4951bp|location=Sequence derived from alignment at sc0000242_pilon:433888..438838+ (Clytia hemisphaerica_ch_hm2_pilon) ATGTCAGTGAATTATGCAGCTGGTTTGAGCAATTTTCCACATATTCACAA
AGGAAGAGTTGGTTTACCTGAGGTAAGTAGcctatttttttgttgattga
gGCCAGGGATTTGATTTAATGGTTAGTAGGAAAAGACGACATATTAATGT
GAATTCGATGACCcaataatatttttaattattaataCCATGATATTTCG
GTCCTaaaaaaaTTAGTCAAGACAAGGCGTACTTCTCAAGACCCTTAGGC
AGAGATCACTGCACAGGCAGAAAGATTAGTTACTCAAGTGCATATCCTGA
TAATCTTGATAATCCTGAATATCCTTGAAATATAAAACACGTGAATGTTT
CATTGGCTCACATCGTCTcttagattagtctgacacccaaaaactttaaa
taataattttataattcATATCTCCATTTACATTATTTTCGTAGATCTTT
GACGAGCCGGATGTTTTAGACGAAAAAATCACTGAACTAGTTAACTTGAT
CAAAACGTCCGAATACATTGTCTTCCATACTGGAGCAGGGATTTCTACCA
CAGCAGGAATTCCAGATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAA
TCTAAAGGCCTATCACCACAAGTAAATATaggtattttgttttgtttata
tcatatTTTCTTCTAATAATGGATCTTTTCTTATGAATTGGTTACACGCA
ACTCCAATTTTGGGGTCAGTGCTGGGGTTGCTAATCATTCTAGAccattt
tctggaaaatttgcTTTGACTACCTCTGATatacaatagcgagtttatgt
atttgcacttttgaggacggtaaagtgactgaagcgatttggaaaaaccc
gcacttCTGTCCCGCAAAATCGAAgatggtaaaagtgctgatttaccgtc
gtcctcagttggtcatgatctagtcaaattagaaccttaccgtctccgtc
ccTGAAAAGCACACATACATAAGCTTGGTAATATTTATACTTCTCGGGTC
AAGAGCTACCGTCTTCCATGGTTTGATTATCTAGTATAGGTTTTACTTTA
CCAGATAGTGAAAAATAGGCTACTTCGAGGACTCGAACCTTAGCAACCTG
CATCGATACTTTTGTAAGAGAACTTTTACCTAAATGATGTTTTGAGTACG
AAATGttgtaataaaaacaaaactcaTTTCGTTGTCTTTCATATATTGAG
AAGTTAAAATAAACCTTTCCGGACTTTCTTTCATACATATTAATAGTTAC
CAACCTGGCTACCTTGtttttttCGTTAGCCACTTAGTGATCTtgaaatc
atttatttttccaaaagcaaCATCATTATAGAGATTCGCTGTACAAAACG
AAGTCCATTCTGAAAAGATTTCGGCTCCTATTATGAATCCTTTCTGGTAA
AGTTTAACTGGTTGTACCGTATTCTTACTGTTAGATTATTGTCATTGATC
GCCATTAAATTACCTTAAGCTATGGGTAACTTTCATCACCTCCAATCAGC
AGACTTTCTGCTAGAACTAAAACGAGTCATGCTGTGACTTATTTACCTTA
ATAATAAATTGAGGACCAGAAAATGTTGTGGTCTGGAGGTGATTAAAGTT
ACCCCTAGTTAATGACGGTAACCCCCATTGACGGTatcaaaaaaaacatt
aaagaattttcaattgACTATATTTACCTTAATTTTTATCTTGcccattt
tcagattttgacgAGGCGATTCCTACTAAAACACATCGTGCGATTCTAGC
ATTACAAAAACTCGGCATTGTAAAGTACGTTGTCAGTCAAAACATCGATG
GATTGCATTTACGTTCAGGCTACCCAAGGTAATTTTAGAAGTcgactatt
tttttatttctcttgatTCTGCAGCTGCAAAAGATGTGAGAAAACGATAT
TCTTAAAATGCACAAGATAATTGCTATCAAAATATTGTTGCCAATATACT
GCAACGCCGTCAGATATATCTTAAGAAGTGTGAGGAATGAAAAGCGTGTA
TCGGTGTTGATTTTAGTCAGAAATCCCTTACtttttttGCTAAGATTTAA
TAAgttcaaacttaagtcatagTCTCCAAAACAAAGAATCTTCAATTTCG
TTTTTAGATGTCAACTGTCCGAATTACACGGCAATATGTTTGTCGAGAAG
TGTGAGAAATGCGGACATGAGTATTACCGGAGAAGCCCTGTCTCTACCAT
GACACAAAAGAGGACAGGCAACCTTTGTTTACAGAAAGGAAAACGCGGCT
TAACTAATTGCAGGTACATTTCTTTTTTAGCCTGCACCAAACTCTTCCTC
GCAGCGggaagattttttcaatttacgaAAAATTACACTACTTGGGGGCC
CCGGTACAAGCTATTTCTTTAGTAGAATGTCTTTTGGACCTACTCCGGTG
GAGGTGCTATAAATTAaccgtcgttcgttcgttcgttcgtctgttaccga
cttttctcaggattggatcatagaaatcttttgattttcgCTACAacggt
gcaaaatggtagtggccaaatgTGACgaaacccgattttcgaaaaaaaaa
attttttgggcaaatttcagccaagACGGTTAAAGAaaggactttgtgaa
aaatttggtCATTaaatctttctgattttttgcattaaagttgggtaaca
tcattggtaaaagatggctgaagcagattttcataaaaatattttttcgg
ttcaaaaaacgaatctttatctacaAGAAtcgctatttataagcatagat
caatatTCTTAGcgatattatttttattagttttttttaagatgaaaatg
tcacagTGGAGggcaatggtttgagttttctagaaacatatctttttttt
ttgcctgaaaaacgaatctttttctataagaatcactaggTCAAAGTTCT
TAgccaaataattattttcattataattttttctaatagaagaaaatgtc
aaagtaGAGTGCAATGGTTTTAGTTTTCtaaaaaccttatttattaagat
gtgcatttttctgatagtggattttataaaaaaaagcgttgaatagcttt
tttatttctttttcaaaagtctttttcaatagtgttgatagtttcccCCA
ATAGATATGCTTGCCAAATTTTTTGAACAGTTATGTCTTTTgagtttcat
tgtttcaatgttcattgattagttttgataaccagttaggtccatcaaag
tatcacttgtttacttGTAAATTCAATATATACAGAGATTGTACTCAAAA
TAAGCCTATTTTTGATTACAGGAAATTTGCCCCTTACGCCCATTAATTTT
GACCGGATACCAGTTACCAGCTTTCATTCAAGCTTCTAATATTTTCCTAT
TTATAGAGGAAAGCTGAGAGATACAATATTGGATTGGGAAGACAGTCTAC
CTTATGGTGATTTGGAAAACGCAGAGAAACATTCAAAGTAAGTCATGTTT
AAAGGGATAGTCAAATTGTTTGGGATATTTGACGAGTGGATTTTTACTAT
CGCACTGAGCAAGACCTCCAAATATTCTTGCCTAACTATTCTCAAAAGTC
GAGATATTCAAGCCACAAGTCTTGACTGTTattaagaaaacaaaagaatt
tcaacgCAAGAAACGTGTAAGGgctcaattttagaaatttcaagtTGTGA
TATCTTGACTTTGGAAAAAAGTTAGACACAAAAATAATTGGGGTGTTACT
CAGTATGACATGAGGTTTCGGCAGCCCTaatatctcaaaatatttgacTA
TCCCTTTCAAGTTAACCATTTCTCTTATCATTGCGAGTTGGTGTGTCACA
TACAAAGGATTGACACACGGGCAAATCTTCGTTAcgttgattgaattttt
tttcaatttcaccgtacaaaaacaaaagccaaaggataaaaattaaaaac
attctgTTCATTTTTCACATTTAGAAAGGCTGATTTATCAATATGTTTGG
GGACCACATTACAAATCGTGCCAAGTGGGAAACTCCCTTTGTTCACGTTG
AAAAACAAAGGAGGAAAAATGGTTATCGTCAATTTACAGAAAACTAAATA
CGTAGGTTGAATGTTTATAACATTATCTTTTAAGTGAAGGAAATGGAAGT
TTATGGGTCATTTGTTGGATCCTCTCTCAGTATAACCATATcacttgtct
gtacacaaacccagtatctgtggcttatttcaaaattcattgccgtagat
ggtctgttgtcattgtcttttctcatttttcaaacCAAAAGTCTAACTTC
ATcccagaggtctccgtacgggaattttttcacccaaacagacaatgcgc
acagagtgtactacgaagcgagaAACGTGAGATACATTCTGGTACCATAT
CACGGGTATCACGGGCGTCTTTAGCGTTTTTTAAGTCGTGCTGttctccc
ccccccctcctCGATTTTTCCCCGGCATTTCTCGTAGTTAGCACAAGCTA
ACGCACCTCGTCTGGGTTTAATGTTTAATAGATTAAAAAGAAGcaagtta
aagaaaaataacaattcATTTTCAGGATAAAAAGGCGGACATTCTGATTC
ATTCGTATGTTGATGACGTCATGGTAGGTGTAATGAAAGGACTGGGACTA
GAAATCCCTGAATACAATAAAGAACTTTATTTGAGTATCACCACAAGATT
CCctgatgaaaaattgaaaattaaaccgAAAGAAGAACAAAAGGGAATGA
CAGAAACGGAAGAACGTATTGGCCAATTAGATTCGAGTATAAAAACTGAA
CAAAAATCAGATTTGATTAATGAAACAacagaagaaattttaaacCGCTC
AAATTTAGGTCATATTTCCATTCACCAGTTATCAGAAAACGGTGTTAAAA
AGTTGAACGGAAACTCATCGAATTCGAAAAGAACTTTACCTGATGAAAAG
TTAAATGAAGGACTGACAAAGCACGTCAAGTTAGAGGAGAAagatttcta
a Coding sequence (CDS) from alignment at sc0000242_pilon:433888..438838+ >XLOC_035538 ID=XLOC_035538|Name=XLOC_035538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2346bp|location=Sequence derived from alignment at sc0000242_pilon:433888..438838+ (Clytia hemisphaerica_ch_hm2_pilon) ATGTCAGTGAATTATGCAGCTGGTTTGAGCAATTTTCCACATATTCACAA AGGAAGAGTTGGTTTACCTGAGATGTCAGTGAATTATGCAGCTGGTTTGA GCAATTTTCCACATATTCACAAAGGAAGAGTTGGTTTACCTGAGATCTTT GACGAGCCGGATGTTTTAGACGAAAAAATCACTGAACTAGTTAACTTGAT CAAAACGTCCGAATACATTGTCTTCCATACTGGAGCAGGGATTTCTACCA CAGCAGGAATTCCAGATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAA TCTAAAGGCCTATCACCACAAGTAAATATagATCTTTGACGAGCCGGATG TTTTAGACGAAAAAATCACTGAACTAGTTAACTTGATCAAAACGTCCGAA TACATTGTCTTCCATACTGGAGCAGGGATTTCTACCACAGCAGGAATTCC AGATTTTCGAGGTCCAAAAGGTGTGTGGACACTGGAATCTAAAGGCCTAT CACCACAAGTAAATATagattttgacgAGGCGATTCCTACTAAAACACAT CGTGCGATTCTAGCATTACAAAAACTCGGCATTGTAAAGTACGTTGTCAG TCAAAACATCGATGGATTGCATTTACGTTCAGGCTACCCAAGattttgac gAGGCGATTCCTACTAAAACACATCGTGCGATTCTAGCATTACAAAAACT CGGCATTGTAAAGTACGTTGTCAGTCAAAACATCGATGGATTGCATTTAC GTTCAGGCTACCCAAGATGTCAACTGTCCGAATTACACGGCAATATGTTT GTCGAGAAGTGTGAGAAATGCGGACATGAGTATTACCGGAGAAGCCCTGT CTCTACCATGACACAAAAGAGGACAGGCAACCTTTGTTTACAGAAAGGAA AACGCGGCTTAACTAATTGCAGATGTCAACTGTCCGAATTACACGGCAAT ATGTTTGTCGAGAAGTGTGAGAAATGCGGACATGAGTATTACCGGAGAAG CCCTGTCTCTACCATGACACAAAAGAGGACAGGCAACCTTTGTTTACAGA AAGGAAAACGCGGCTTAACTAATTGCAGAGGAAAGCTGAGAGATACAATA TTGGATTGGGAAGACAGTCTACCTTATGGTGATTTGGAAAACGCAGAGAA ACATTCAAAAGGAAAGCTGAGAGATACAATATTGGATTGGGAAGACAGTC TACCTTATGGTGATTTGGAAAACGCAGAGAAACATTCAAAAAAGGCTGAT TTATCAATATGTTTGGGGACCACATTACAAATCGTGCCAAGTGGGAAACT CCCTTTGTTCACGTTGAAAAACAAAGGAGGAAAAATGGTTATCGTCAATT TACAGAAAACTAAATACAAAGGCTGATTTATCAATATGTTTGGGGACCAC ATTACAAATCGTGCCAAGTGGGAAACTCCCTTTGTTCACGTTGAAAAACA AAGGAGGAAAAATGGTTATCGTCAATTTACAGAAAACTAAATACGATAAA AAGGCGGACATTCTGATTCATTCGTATGTTGATGACGTCATGGTAGGTGT AATGAAAGGACTGGGACTAGAAATCCCTGAATACAATAAAGAACTTTATT TGAGTATCACCACAAGATTCCctgatgaaaaattgaaaattaaaccgAAA GAAGAACAAAAGGGAATGACAGAAACGGAAGAACGTATTGGCCAATTAGA TTCGAGTATAAAAACTGAACAAAAATCAGATTTGATTAATGAAACAacag aagaaattttaaacCGCTCAAATTTAGGTCATATTTCCATTCACCAGTTA TCAGAAAACGGTGTTAAAAAGTTGAACGGAAACTCATCGAATTCGAAAAG AACTTTACCTGATGAAAAGTTAAATGAAGGACTGACAAAGCACGTCAAGT TAGAGGAGAAagatttctaaGATAAAAAGGCGGACATTCTGATTCATTCG TATGTTGATGACGTCATGGTAGGTGTAATGAAAGGACTGGGACTAGAAAT CCCTGAATACAATAAAGAACTTTATTTGAGTATCACCACAAGATTCCctg atgaaaaattgaaaattaaaccgAAAGAAGAACAAAAGGGAATGACAGAA ACGGAAGAACGTATTGGCCAATTAGATTCGAGTATAAAAACTGAACAAAA ATCAGATTTGATTAATGAAACAacagaagaaattttaaacCGCTCAAATT TAGGTCATATTTCCATTCACCAGTTATCAGAAAACGGTGTTAAAAAGTTG AACGGAAACTCATCGAATTCGAAAAGAACTTTACCTGATGAAAAGTTAAA TGAAGGACTGACAAAGCACGTCAAGTTAGAGGAGAAagatttctaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000242_pilon | genome | sc0000242_pilon:433888..438838 + |
Properties
| Property Name | Value |
| Aaloc | 748-1173:4526 |
| Aaloc | 622-747:3926 |
| Aaloc | 541-618:3358 |
| Aaloc | 385-537:2109 |
| Aaloc | 262-381:1707 |
| Aaloc | 73-258:445 |
| Aaloc | 1-72:1 |
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