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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000242_pilon:476676..484080- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035535 ID=XLOC_035535|Name=XLOC_035535|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7405bp|location=Sequence derived from alignment at sc0000242_pilon:476676..484080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTCAATCAAATCAAAGTTCAAATCACCAGCAAGCAAAAAACAAAA
GAATTTTCCTGGTTTCATCGTATTAGAAAATGAATTTATTAAATCACCAC
CTGAGGAAAAATGGAAGAACGCCAGTTGGAATAAACGATATTTCATACTC
TTAAAAATGCTGAATTTGAATGAAGACAGAGATGCCGGTTTGATTCAGCA
AGGATACAAAAAAAGTATCAATAATGATGGCAAGAATTCTTCCTTCTGCC
TACTTTATTGGCACGATGAGGCCGAACGACGTAAAGGAGCCAAACCTATC
CGTAAGTATTCTCTTTATGAGTGATCAATCACGACTGGAAATTGATATGT
ATGCAATTGAATCTTTGTAACTCCAACACGCACAGGGAATTCAAATTTAG
TCAAGGAAATTTCGATTCATAGAAAAAGGTTTCATTCGAGCTAAAGAGCT
TCGAATTATAGAGACTGTCCACTGTCATTCCAATCTCTGGCAAGCAAGAC
TTTCAAACCCTTTCTGGTAAACCCGGGGGGTACTAGGGTTGCGAGCTGAC
GGGGGGGGGTGCCGCCCGACTTTCGACCCTCGGACCCTTACCGGGACTAA
AAAGGAGAAAACAAAGAAAAATTTTGGGTATTTTACGACCCTTAGCGGGA
CAAATTTGACCAATTTTGACCGAATTTCGATCTTTCAGGGGGTAAAAAGT
TGAAATTTTCCTATTTTTTCGACCCTTTGCGAGACTTTGGAAGTCCAAAA
AAGGTACCCTTAAGGGCGGCACATACCATACCCTCCATTTGCCTAAGTAC
CCCCCCCCCGGGCTGGTAAAGTTCACTGTTACCGAGGAAGAATTGAGATT
TTTAATTGAAATTTGCCAGCATGTTTCGTATCTGAAATAGTCTTTGCTGC
TTCCTAAACCTATTTGCGATATGTGTTTTCAGCCCGTTTTCAGGGACGAG
TCCCTCATTAAGGTTGCAAAGATAAATTTTGCAAGATAAAAGAAGGGAAA
GGTCCCAATTCGTGAATTCGTAGAATAATATCGATATTGCATCATAACAT
ATAGTATGACCCTTATGTTTGTTTTTGCTGATAGTTGACAAACACTTATC
TTTTATATCGGATTATTAAAGTTAATGCGATTCGCACTCTCTCATAAGAT
CTTTCCCCTTTAAACCTTGTTAACGTAATAAGGAACTGAGGAGCGTAGTG
ATTATATAATAACTAGAACTCTGTCTGAGAATTGAGGTAGGGAACATCCA
TTCAATATTTTCATTTTTTTAAACAGAATTTCAGGCATATTTTAATACCC
CAAATAGTCAAGATCATCATCAGTTCATGATATGCACCACTGCAAACCTG
CAATGACTTTGAGAAATTATGCAACTTTTCTGTTTTTGTTCCACCCAATA
CGTCACTTTTTCTATTGTTTAAGTGACGTATTGGGTGGAAGATTTTAAAA
GTTCTCAGAAGACTCTCCGGTGGTGTAAATCATGAATACTTTTGTTTCAA
AAATTGAAATGAAAAGCACCAAATTTTAGCAGAATTAAAATCTTGAGTCT
ATTTCCCGTAACATTTAGCAATAATTCTAAATTATAAAATTAGCCATTTT
TGATAAAGCCATCTACCCCTTTTTATCTACTGGGCTAGCATGTACTGGTT
AGTAACCACATAAATAATAAGTTCTTTAATCCCGTCTTTAAAATGTACCT
TTTACTGTACTCTCGGGTAGCTACCCCTACTTTGTACCGCTAATTAAGTT
TCCACCCATTCTGCTTATTCCAAACCCCCGTTTACCTGAGAGTAAAAGTG
CTAAATTGAAATGATTCAACGCAAATTTTTAGGAGTCATATCATTGGACA
ATAAATGTGCAGTCAATAGTTACAAACATCCATTCTGGCAAGCTAAATAT
CCACATATGATCGAACTGAAAACTCCAAACCGTATCTTCGTCTTATGTGC
TGATACAGAGGATTCGAAAAGACTTTGGTTGGATGCATTGCATGGAGCAA
TTGAACAGATTGGACATGAGGATAATCAGGTGAAAGAAAGATCTGGTAGT
ATCGACCCAGTAAGTAAACTTACCTTAAGTAAAGATAAATTTTGGCGAGG
ATTATATATTTGGCGAATTATTCGGCCATTTGCCAAATTTAATCCCTGCC
AAATTTAACAAAAGAGAATTATGTGAAAAATCACAACTTTTTAGTAAATT
TTTGAGTAATTTTCACCCATTTCAGTGTGACAAAATTTCCAATTCGCCAA
ATTAAATACCCGCAAAATTTCACGAAAATGATCTATCGCCAAATTAAATC
CCCGCCAAAAATAGTATTTTGGCATTTGTTAAATCCATACCAAAAGGTAG
TTCTCAGTCTTCTATATCGCACACTTGCACTCTTTTTTATAAGAATAATT
TTCATAGGAATAGAGACAACGGAAAAGAACGAGGCTTAAAACAAGAACAA
TTTAAAAAGAATTCTAGAGTCTTCAATTGCTTAATGTCAAGTAATTGCTC
GGAGCCCCTTCAAAATTAAGAAAAATAAGGCTTCAACAAATCTTTACTGG
TTCTTATAAAATTTCGCTAAATATTACTAAGGTAAAATTTCAAATTAGCG
AAAATAATCTAGTAGGATTTCACAATTTTTTAAACTTGCGGGATCAAATC
TCGAGAAATTTAATCTATGAGAAAATGATAAAATTCAAACGTGAATTTTT
GTCCTGTGGACAAAGTAAACAGATAGTCAGTCAATTAACAGACAATATAT
AAGAACAAAATTGAAGCATTGACCTTTTATAAAATAGAATTTCTTTTATA
TCTAAAGTTTCTTGCTAATATCCTTATTAAATATTTCAAAAACATTTCAA
GCCTTTGAAAGTTCTCAGTTTTTTTTAGATTTTAAGCCTAATATTGTTCT
TAAAGTGTTCTTATATTCGCCATTTTGTGAGTATGTTGGTTAATTTTTTA
AGAAATTTCATGTTTTAGAGTCTACTAAGACTTAAATGAAAAATGTTTTT
TGAATGTTCTTATATTGTGGACCTTACAGTCCTTGTGTTCTTATTTACGT
TCATACAGTATATAAAGATTTCATAATTATATACCAAGAAAAAATTGAAA
AATATATTTACATTAAGGGAACTTTAGCAGGAACTAATTTTCGCGAGAAA
AAAAAAAATCAAAAAATCGCATTTCGCGGGAATTAGTTTTCGTGGTTTAT
TCCCATTTCGGACATTTTGATTATATTTTCCTAGGGATCTTTCGAATTTT
TTGATAAAAAATAGCCATATTTGTAATTTGCAGGTCCTAAAAAACGAGAA
TTATTTCCCTCGAAAGTTCATTTAAGGCACTCATATATGATATCAGGTAA
AATAACCTCTACCAAATTAATCTTTTAATAAAATCCAATTGGGTGTAAAT
CGTTTTACTTTGAACAAATGGGCTTTTCCAGAAGAAAACCCTATACCCCC
TGTTGAGAAGGTCCATTTCCGTTTCAAGGGGGGTAAGGTTTGATATGTAG
CGGAATTCCATAGGGGAGATACAAGAATTCCATGGGGATAGCTTTTTAAA
TCCTACTAAAATTCACAATTCCAGAGGAGGTTAAAACCTGAAATTGCCTG
TAATTCCAGGGGGTTGCAGCATTTCCAGCCACAGAAGGATAGACCTCCTC
AACAGGGGGATACAGTTTTTTTTCTGGAAAAGCCCAATACTGGCCACGTT
GGAATATGAGAAAACAAACACATGATTGACATAAATATGTTAAACAATTT
ACCCTATACACGCATGAAAGTATGTGAGTCTCGCTACTTAACTGCTGATA
GTTTCAAATGACATACTTCAAATATAGACACTCTGGTGCGACAGTAAAGA
CACATTTTTTATAAGATCATTCAAAATTTTGGAAGCCTTTAAATGTTCTT
AACTTTTTTAGTTTTAAGAGCCTTAAAATGTTCATAACTTGTTTTTAATC
TTTTTTGCCTATCGTCGACTTTATGTTATTTTACAGTTTGTTTTTATATT
AAAGTAAGATGTACCTTAAACAAAGAAGACACTTTGCTGTGACAGCAAAT
AAATAAAGTTATGAAAAGGGGGATTTACCACAGCGCACAGATTTACTGCA
CGGTTCGAAAGATACAACACAAGTAACGTGAAGAGAAAGTGAATAATGTT
TGCTGAAAGATGAAATTACATTACCTTTCAGCAATCTAGGTAATGACTGA
TATTTTGGAAACTTTCCCGAAATATTGGTAAAATGATTTTCATGTATAGA
ATCTATTAAGTATCCCAGCTGGCACACAACGTTGTTTTAACGTTCAAATA
ACGTTATTTGGACGTTATGAATGTCAAATGGACGTTGTTTGGACGTTTGT
GTGCCAGCTGGGATAATATACGCAAGCATTTTAAAAACAATCTGTAGGTC
TTAGCGTTTTCGGGGTAAGATTCAACTTCCCGTTACTATCACATAGATAT
CTTGAAAAGTGAGCTTTAGAAAGCTAGTCATTTTCCAAACTGTACACAAG
CTACACATTTTTTTATAAGAACAAACTATATAAGATCATAAGACTTCGAT
GGCCAAAACCTTAAGAACAAGTTAAGAACATTTTAAGGCTTTGCTGACTC
TAAAACAATTTCTTAGGAAAATGGACCAAAATACTCACAAAAAACTCAAA
AAGTTAAGAATATCCTAAGGCTTCAAAAGTTTTGGATGTTCTCATAAAAA
ACGTGTATTCCCGGGCCTCTAGAAAAAGATCTTTCCAGTCTTCAGTCGAC
TGGCTATCCAGGTAAACAGCGAAAATCCAGACAGGAGAGTGGAATCTCAC
AAAAAACGAAGAACTAACACTTTTTATTCTTTTTCATAGATTTACGCAAC
ACTGTATGAAGTTTTACGGTAAATAAGATACTCCTTTGTTGCAGAAATGA
TAGGACCTCAATCCGAAAATCAACGAAAAAGATTTTTCTTCGTTATGAAA
GAAATGCTTTGAAATTTCATCCCCGTTAGAAAAGAAACTTCACCTTACCA
CCCATAAGCTCAAGAAATTGACATTAGGCTGCTTTGTCTCATATCAAGAA
AGTTTTACAATAAATCCTCACTCGGTCAACTGATTCCGATAAAGAAACAA
TATGAAAGTCGCCACCATTTTGAGAATCTGATAGACCCCACCAATAAAAG
CAAGAAATCTTCCAAGTCCATTGGCATTAGGCTTTGTTTCATACTGACTG
GCAAATGAATCCTCACTCGGGTCAAGATCACCTATATATACCCTGGACCC
AAGCTTTATCCGCCAGCTTTAGTAGCACTACTCAATGTTGGTCAATTTGT
AATTCAATGAAATTTTCCGTTTAAAAGTTTTCTTCACCAACATTGAGCTG
GGACTATCACTTTCAAAAACCTCTGAACAAAGATTTTGTTTGGCCGAGAT
CGAGAAACTGTGTCTAGGGTATAAAGATCAGTTAGGACATTGACGATAAT
TTTTAGGGAAAAGAGACGACCATCAGAAAGCACATGGAGTACTAACACAG
ACGATTCTGGTTATGGTGATGATCTACACCAATCACTAAATCGTTCACAA
TCGAACAGCTCTGGAAACTCTTTTTGTACAAATTCTAACCACGATCAAAT
TCAATCACAAGGTATGAAGAAAAGTCAAACTTCTCCTATTTCTATTACAT
CTATTACATCTCTGTCCCATCTCTGTCCCATCTCTGTTAAATCTCTATGC
CAGCTACTCTCAGGTCAATGTCCAATGTAAAATCTAGCGGTAAATTTTAC
TTTCAATATGGAATTTGTATAAAACCCACGCGGGCCGCTCAAGGCCGCGC
AACTTAGGATTTGGCAGCTTCAAATCCTATGTATCCTTACTAGTCCTTCG
GACTTTTACTTCATTGCTTTAAAGTGTAATTCTAAACATCCGTTCACTAT
CGTTTATCAAGGATCAACAAATAACAATGGTCAACATCAAGCATCAAGTG
GACCTTCATTCAATAAAGATATCAACACTAAGAGACTCAGCATGCCACAT
CATTCACTCCCCCAAAAGCCACCACCAGGGAGAAGTCTTTCAGTACCTGA
TATCAATGTTCATTTTCCACAAGCGGCACAAGATGAAGATCTCTATGTCG
ATATGACTGATCAGGAGAGGTAAGAGCTTTTTCACCACCACCACCGGGTC
TATGTAGGTCAGTGGTTATACATTGCTAAATAAGCCCAAGTCAAATGTTC
ATTTAGTTGTTTTAGAGTCTCATTTGAGCTGCCTTTTCTACTAAAGAACT
GAAACTGATCTTTTTCTCCCAAAATTTTTTATGTTATTTATTCAAGAAAC
GGAAGCCCTATTATCGTATTGGACTTTTCCAGAAAAAAAATTGAATATGG
GGGGTGGAGGATATAACACTTTTCAGTGATTTACCCCCCGGACAAAGTGA
CTTTTGGCCCCCGGACAACGGGTTTTACCTCCCGGAGAAGCATCAGTTGA
CCCCCGGACAACCCAAATTACCCCCGCACAGAGCAAATTTACCCCCCGGA
CAAGGCAAATTTTGATGATTTTTCGCTACCCCCGGACAATATATCCTCCA
TCCCCCCCCCCATTTACGGACATTTTCTGGAAGAGCTCATTATTATCTCT
TAACTTTCACTCTGTAATTTCTTTCAAATTCCACTTTCTCAAAAGGTACC
AATACATCCAAAATGCAAGACAACAATCACCCCTATCAACTAATACAAAA
TTTACGGGTTTTCCAAATCACATTGACGAAAACAATCGAGTGGAAAGCCC
CTATGCTAAACCCTACGATTCTCGACAACGTAATGATAGCATTGTGGAAA
ACCCCCAAAACGGATCGGAAAATCTTTATGCAAATAAACCTCAGCCAAGA
CCAAGGAGTAGCAGCGATTCACCTGTCTCCGTGAAAAAAAAGTAAGTAGT
TTTAACACCTCTGTCGCCTCGCTAGTTGGATTTCTATGGGATCAAAACAG
TCCTGGTGGGGAAGCAAATTAACTTAATTGATGAAAAAATTAGATCTCTA
AGTTGTTTATTGAGTTGCTTTTTTTTTTGCCTCGATGTCAATAATGACTG
AAATTAAAAGGTTCAATTCAGCATTAGGGCTTTCCAAACTAATTCCAAAC
GAAATATTTTTATTTCTATTATCATAGAAGTACGATTTGAGGTCTCGTTG
GAGACTGAGATTCAACTCAGGTAAATTACTAAAGCAAAGCCCATTTCATT
CATTCATTATAGAGCACCTGGCAAACCGCCGAGAACCAGTATCAGTGAGT
CTGTAAAACGTTTAACAATTGGAAGTACGATAACATTAGAAATACCAAAC
AACTGCACCATCAACATGCAAGCAGATGGTCTACTCAACATATCAACGCC
CTCAGAAGAAATTACAATTTCAGTACACAAAAAGACTGAATCAAAACCAA
TGTAA Coding sequence (CDS) from alignment at sc0000242_pilon:476676..484080- >XLOC_035535 ID=XLOC_035535|Name=XLOC_035535|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2718bp|location=Sequence derived from alignment at sc0000242_pilon:476676..484080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTCAATCAAATCAAAGTTCAAATCACCAGCAAGCAAAAAACAAAA
GAATTTTCCTGGTTTCATCGTATTAGAAAATGAATTTATTAAATCACCAC
CTGAGGAAAAATGGAAGAACGCCAGTTGGAATAAACGATATTTCATACTC
TTAAAAATGCTGAATTTGAATGAAGACAGAGATGCCGGTTTGATTCAGCA
AGGATACAAAAAAAGTATCAATAATGATGGCAAGAATTCTTCCTTCTGCC
TACTTTATTGGCACGATGAGGCCGAACGACGTAAAGGAGCCAAACCTATC
CATGAATTCAATCAAATCAAAGTTCAAATCACCAGCAAGCAAAAAACAAA
AGAATTTTCCTGGTTTCATCGTATTAGAAAATGAATTTATTAAATCACCA
CCTGAGGAAAAATGGAAGAACGCCAGTTGGAATAAACGATATTTCATACT
CTTAAAAATGCTGAATTTGAATGAAGACAGAGATGCCGGTTTGATTCAGC
AAGGATACAAAAAAAGTATCAATAATGATGGCAAGAATTCTTCCTTCTGC
CTACTTTATTGGCACGATGAGGCCGAACGACGTAAAGGAGCCAAACCTAT
CCGAGTCATATCATTGGACAATAAATGTGCAGTCAATAGTTACAAACATC
CATTCTGGCAAGCTAAATATCCACATATGATCGAACTGAAAACTCCAAAC
CGTATCTTCGTCTTATGTGCTGATACAGAGGATTCGAAAAGACTTTGGTT
GGATGCATTGCATGGAGCAATTGAACAGATTGGACATGAGGATAATCAGG
TGAAAGAAAGATCTGGTAGTATCGACCCAGAGTCATATCATTGGACAATA
AATGTGCAGTCAATAGTTACAAACATCCATTCTGGCAAGCTAAATATCCA
CATATGATCGAACTGAAAACTCCAAACCGTATCTTCGTCTTATGTGCTGA
TACAGAGGATTCGAAAAGACTTTGGTTGGATGCATTGCATGGAGCAATTG
AACAGATTGGACATGAGGATAATCAGGTGAAAGAAAGATCTGGTAGTATC
GACCCAATTTACGCAACACTGTATGAAGTTTTACGATTTACGCAACACTG
TATGAAGTTTTACGGGAAAAGAGACGACCATCAGAAAGCACATGGAGTAC
TAACACAGACGATTCTGGTTATGGTGATGATCTACACCAATCACTAAATC
GTTCACAATCGAACAGCTCTGGAAACTCTTTTTGTACAAATTCTAACCAC
GATCAAATTCAATCACAAGGGAAAAGAGACGACCATCAGAAAGCACATGG
AGTACTAACACAGACGATTCTGGTTATGGTGATGATCTACACCAATCACT
AAATCGTTCACAATCGAACAGCTCTGGAAACTCTTTTTGTACAAATTCTA
ACCACGATCAAATTCAATCACAAGGATCAACAAATAACAATGGTCAACAT
CAAGCATCAAGTGGACCTTCATTCAATAAAGATATCAACACTAAGAGACT
CAGCATGCCACATCATTCACTCCCCCAAAAGCCACCACCAGGGAGAAGTC
TTTCAGTACCTGATATCAATGTTCATTTTCCACAAGCGGCACAAGATGAA
GATCTCTATGTCGATATGACTGATCAGGAGAGGATCAACAAATAACAATG
GTCAACATCAAGCATCAAGTGGACCTTCATTCAATAAAGATATCAACACT
AAGAGACTCAGCATGCCACATCATTCACTCCCCCAAAAGCCACCACCAGG
GAGAAGTCTTTCAGTACCTGATATCAATGTTCATTTTCCACAAGCGGCAC
AAGATGAAGATCTCTATGTCGATATGACTGATCAGGAGAGGTACCAATAC
ATCCAAAATGCAAGACAACAATCACCCCTATCAACTAATACAAAATTTAC
GGGTTTTCCAAATCACATTGACGAAAACAATCGAGTGGAAAGCCCCTATG
CTAAACCCTACGATTCTCGACAACGTAATGATAGCATTGTGGAAAACCCC
CAAAACGGATCGGAAAATCTTTATGCAAATAAACCTCAGCCAAGACCAAG
GAGTAGCAGCGATTCACCTGTCTCCGTGAAAAAAAAGTACCAATACATCC
AAAATGCAAGACAACAATCACCCCTATCAACTAATACAAAATTTACGGGT
TTTCCAAATCACATTGACGAAAACAATCGAGTGGAAAGCCCCTATGCTAA
ACCCTACGATTCTCGACAACGTAATGATAGCATTGTGGAAAACCCCCAAA
ACGGATCGGAAAATCTTTATGCAAATAAACCTCAGCCAAGACCAAGGAGT
AGCAGCGATTCACCTGTCTCCGTGAAAAAAAAAGCACCTGGCAAACCGCC
GAGAACCAGTATCAGTGAGTCTGTAAAACGTTTAACAATTGGAAGTACGA
TAACATTAGAAATACCAAACAACTGCACCATCAACATGCAAGCAGATGGT
CTACTCAACATATCAACGCCCTCAGAAGAAATTACAATTTCAGTACACAA
AAAGACTGAATCAAAACCAATGTAAAGCACCTGGCAAACCGCCGAGAACC
AGTATCAGTGAGTCTGTAAAACGTTTAACAATTGGAAGTACGATAACATT
AGAAATACCAAACAACTGCACCATCAACATGCAAGCAGATGGTCTACTCA
ACATATCAACGCCCTCAGAAGAAATTACAATTTCAGTACACAAAAAGACT
GAATCAAAACCAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000242_pilon | genome | sc0000242_pilon:476676..484080 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1168-1359:193 |
| Aaloc | 922-1164:760 |
| Aaloc | 715-918:1493 |
| Aaloc | 559-711:1949 |
| Aaloc | 529-555:2567 |
| Aaloc | 304-528:5572 |
| Aaloc | 1-300:7406 |
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