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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:1119899..1123175+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035503 ID=XLOC_035503|Name=XLOC_035503|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3277bp|location=Sequence derived from alignment at sc0000059_pilon:1119899..1123175+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAGCAGTGTCGATCATTTTTGGAACTATATGAGGTAGATTGGACAGC
CTTTTCAGTGAACGCGCAGGCCGTCTACGAGGATCGAAGTGCAAATGCGC
CTCAGAATTTACCATTGGAAAGCGATGTCAAGTTGTTCAAACAGTATTGC
GTTGACGAAAtcacaaaaatgttgaaatatgaTTCCTTCTCAAAAGATGA
CTACTCGTTGCTTTCCAATCTCACACTTGCAAGGCTGATGACCTTCAATG
CAAGGAGAGGTCGGTATTTCCTTATCCGTTATTCATCAGAATTTGTATTT
AGTCTGGTTACTCTAGGGTCTGAGTGTAATTGAGTATGTAAATGATCATT
TTCATGACCTTTCAGATGGCGAGAtagttgaaatttctttttgttgaaaG
GGATTTGTATTGCTTGTAGAGCCTGTTGTGCATATTGTAAATGTTTGTAA
TAATATGTGTAGATTTGCCACCAAATGAAAATTCCTTAGCAACAGCGCGA
GGAAACGAAAAATCCGCTATTATGGAAAATCTACCACGCCTAAAAACTTG
ACCAAACCTTTTTTCATCTGCATCATGACACCTAAACAGGAATAGAAGTC
AAAGCCCTCCACACTCAATTACCCTCAGAACCTGAAAAACCCAATGGGTC
CTAGAACTCTCAGCAACAGTtgattgaaaaagacttttaatACAAATCCC
TgtgaacaaaaagaaatagaaatttcAACTGTCTCGTCAtctgaaaaatc
ttgaaaaataagcaagattttgaaatatttgattgattttgaaaagtttg
attaacTTGGTACTTCAAAATAGCTTGGAACCCTTGATGACTACTATCTA
GATCTACATTTTTGAGCCAAGCccaaaagagaaattttgaaatatactaA
AAGAAAATGATATGGTTGATAGGGTTTAGATCAATCTCATATAGCTGTTG
AATATCAAAAGTGCAAAAGCTTTGAATTTGGTTATATTGAAATGCgttta
tatattttcattcaGGCTCAGAGGTTGCAAGGTTAAAATTGGATCGTTGG
GAGGGGGTTATGGACGACCGTTGGaaaaaaaaGGAGTACATCGATCTCAT
CGATGACGATGTTGAGCGTAAACTGGCCGAGAAATTGAAACTTTGTTATA
TCGaggggaaaaagaaaaagaggtcgaagaaaaagaagaaccaCGTTCCG
ATACTTTTCCCTGAAGAATGTGTGGAGGCAATTCAACGTCTAGTCTCTTT
CAGGGATAAATTTGTAGACGAAGAAAATGAGTATGTTTTTCACTCCGGCG
AGCTCTACATTAAAGGTTGGAACGCTTTGCAAACCGTGGCAAAGGAAATT
GGCGATCGTTTGACATCGCCAAAGTTACTTACGCCAACTAGGACAAGAAA
ATTCCTAGCCACTATCTTACAACTGATGCAGCTCAATGACGCAGAGCTGG
GCTGGATGACGACTCACATGGGACATACGAAAGATGTCCACCTCGGCTTC
TACCGTCAGGAGGATTCTACGATTGAGCTGACAAAAGTGGCTAAGGTACT
TAATTTTGATCACTTGTTAACTACCTCGCATTTTATGTCTCtagttttgc
caaaatttcagACGAGGCCAAAACTTGAGATGATTTGATTAATGGACTGG
TTTTACAAATATTTGGAACGCTTGGTGAATAAGAACCAAGACAATAGCCT
TGAAGTCCTATTtattaaacaaaaattgaatgaagaataaatatgaattt
cttttgatttaaggTGTTATGTGCGGTGGATCAAGGGGCAGAGTTGAAGA
ACAAAAAGATTGACGATCTCCTAACGGGTAGGTATTTTTACGTGTCCAGT
ATGAATTTAATGCAGGGTCTAAGTGTTGTACTTTAATTGCCGAAACGTTC
AAAATTTACAAGGTCATAAGCACAACTGCATTAACTTCGGAAAGCTTCTA
CCGTGCAACAGCTGCAAAAAAGTATATAGAAAACTTTGAAGGAGTAGGCC
GATCACAAGTTGTTTGACCTAGAACCCTCAGATGGCCAGATTTGGTCGTA
AAAACCAATTTCTATATAACTCCAGATCATTTCAGAAATCGAATATACTT
GTTTAAAAGTCTCCTATGTATTCCTTTGACAGCTTTAAGGTGGTATTTGG
TAGGATGTCCCAGCCTAGATAGTTCGTATTTCTGTCTGACTACAATCGCT
TATGAATATTTAGTATAAGACCAGGTCACACTGAAGTCCACTTCCCATTT
CCATTTTCCAGCTATTTGTTATACAAAGTATCTTTTTATAAGCGTTAGGT
GAATTTTTCAGAGCctcatttttgacaaaataattttgtcactttattat
tcaattaATTAATTTTGTGAGTAATTCTTTTCATAGAAATATTGTTCCTT
TAATCCATGAATATTTTGAATCTATAGAAAACAATGTTGAAGAGAGCAGG
ACTGAAGACGCTGAAGACAACGATATTCAGCAGCAACGAGAAGACCCTAA
GGTTAGTATTGCTTGGTACATCAGCCCAAAATCTACTACTTGTTCACCTA
ATTTCGTTCTTTTTCCGGGGCAAAAATgccgattttaaaattttcgcgag
gactAAATTTCATCcaatttaatccacgcgaaatttaatccaccaATGGT
AGTTAGACAtttttttGCATTAGCATTTATCATCTTAGCTTTTTTGACAT
TACACGCAGGCGTGTGGTAGTATTAATGGGCCTTTGTATACTCAGCCAAa
ttattttctgaaatattgcaCTCAATCTTGAAATGTAATTTGAATTGAGA
AATTTCGTAATGTAGCCGCTCGATTTTTCCTGTAATTTCCTTGCAATGCA
GTAATAATTTAGCAGAGAAGATTGTAAGAGTGCTGCAACAGAAAAGATCT
GATCTGTAATTTTTTCTGTTAGAAAGGCTTTTTCATTAGACGGTCACATT
ACTTTCAGGTTTCAAGTGCGTGCGATGCCTTTGATTGCATTGCAGGATTG
CAGAAAAGCATACTTTAGCTTTAGTCatgtaaaaaaagacaaatcctTTT
TCTATTTCTAGAAAACTAAGAAGACGTGGAAAAAATGGACGAAAGCCGAA
ACAGAAGCATTACATAAAGCATTCCAACACCATGTGAAATCAAAAGTCAA
ACCAATGCAACATGAAGTCCTAAATGCATTGAATAGGTACCCAGTACTGA
AGGAGCGGGGAGCAgacaaagtgaaaaataaaataagtaaaactatagat
attttgaagaaaaaaagttcggACTAA Coding sequence (CDS) from alignment at sc0000059_pilon:1119899..1123175+ >XLOC_035503 ID=XLOC_035503|Name=XLOC_035503|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2286bp|location=Sequence derived from alignment at sc0000059_pilon:1119899..1123175+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAGCAGTGTCGATCATTTTTGGAACTATATGAGGTAGATTGGACAGC
CTTTTCAGTGAACGCGCAGGCCGTCTACGAGGATCGAAGTGCAAATGCGC
CTCAGAATTTACCATTGGAAAGCGATGTCAAGTTGTTCAAACAGTATTGC
GTTGACGAAAtcacaaaaatgttgaaatatgaTTCCTTCTCAAAAGATGA
CTACTCGTTGCTTTCCAATCTCACACTTGCAAGGCTGATGACCTTCAATG
CAAGGAGAGAGAGAGCAGTGTCGATCATTTTTGGAACTATATGAGGTAGA
TTGGACAGCCTTTTCAGTGAACGCGCAGGCCGTCTACGAGGATCGAAGTG
CAAATGCGCCTCAGAATTTACCATTGGAAAGCGATGTCAAGTTGTTCAAA
CAGTATTGCGTTGACGAAAtcacaaaaatgttgaaatatgaTTCCTTCTC
AAAAGATGACTACTCGTTGCTTTCCAATCTCACACTTGCAAGGCTGATGA
CCTTCAATGCAAGGAGAGGCTCAGAGGTTGCAAGGTTAAAATTGGATCGT
TGGGAGGGGGTTATGGACGACCGTTGGaaaaaaaaGGAGTACATCGATCT
CATCGATGACGATGTTGAGCGTAAACTGGCCGAGAAATTGAAACTTTGTT
ATATCGaggggaaaaagaaaaagaggtcgaagaaaaagaagaaccaCGTT
CCGATACTTTTCCCTGAAGAATGTGTGGAGGCAATTCAACGTCTAGTCTC
TTTCAGGGATAAATTTGTAGACGAAGAAAATGAGTATGTTTTTCACTCCG
GCGAGCTCTACATTAAAGGTTGGAACGCTTTGCAAACCGTGGCAAAGGAA
ATTGGCGATCGTTTGACATCGCCAAAGTTACTTACGCCAACTAGGACAAG
AAAATTCCTAGCCACTATCTTACAACTGATGCAGCTCAATGACGCAGAGC
TGGGCTGGATGACGACTCACATGGGACATACGAAAGATGTCCACCTCGGC
TTCTACCGTCAGGAGGATTCTACGATTGAGCTGACAAAAGTGGCTAAGGC
TCAGAGGTTGCAAGGTTAAAATTGGATCGTTGGGAGGGGGTTATGGACGA
CCGTTGGaaaaaaaaGGAGTACATCGATCTCATCGATGACGATGTTGAGC
GTAAACTGGCCGAGAAATTGAAACTTTGTTATATCGaggggaaaaagaaa
aagaggtcgaagaaaaagaagaaccaCGTTCCGATACTTTTCCCTGAAGA
ATGTGTGGAGGCAATTCAACGTCTAGTCTCTTTCAGGGATAAATTTGTAG
ACGAAGAAAATGAGTATGTTTTTCACTCCGGCGAGCTCTACATTAAAGGT
TGGAACGCTTTGCAAACCGTGGCAAAGGAAATTGGCGATCGTTTGACATC
GCCAAAGTTACTTACGCCAACTAGGACAAGAAAATTCCTAGCCACTATCT
TACAACTGATGCAGCTCAATGACGCAGAGCTGGGCTGGATGACGACTCAC
ATGGGACATACGAAAGATGTCCACCTCGGCTTCTACCGTCAGGAGGATTC
TACGATTGAGCTGACAAAAGTGGCTAAGgTGTTATGTGCGGTGGATCAAG
GGGCAGAGTTGAAGAACAAAAAGATTGACGATCTCCTAACGGgTGTTATG
TGCGGTGGATCAAGGGGCAGAGTTGAAGAACAAAAAGATTGACGATCTCC
TAACGGAAAACAATGTTGAAGAGAGCAGGACTGAAGACGCTGAAGACAAC
GATATTCAGCAGCAACGAGAAGACCCTAAGAAAACAATGTTGAAGAGAGC
AGGACTGAAGACGCTGAAGACAACGATATTCAGCAGCAACGAGAAGACCC
TAAGAAAACTAAGAAGACGTGGAAAAAATGGACGAAAGCCGAAACAGAAG
CATTACATAAAGCATTCCAACACCATGTGAAATCAAAAGTCAAACCAATG
CAACATGAAGTCCTAAATGCATTGAATAGGTACCCAGTACTGAAGGAGCG
GGGAGCAgacaaagtgaaaaataaaataagtaaaactatagatattttga
agaaaaaaagttcggACTAAAAAACTAAGAAGACGTGGAAAAAATGGACG
AAAGCCGAAACAGAAGCATTACATAAAGCATTCCAACACCATGTGAAATC
AAAAGTCAAACCAATGCAACATGAAGTCCTAAATGCATTGAATAGGTACC
CAGTACTGAAGGAGCGGGGAGCAgacaaagtgaaaaataaaataagtaaa
actatagatattttgaagaaaaaaagttcggACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:1119899..1123175 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 928-1143:3062 |
| Aaloc | 856-927:2430 |
| Aaloc | 790-852:1764 |
| Aaloc | 262-789:1018 |
| Aaloc | 1-258:1 |
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