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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000270_pilon:282037..286711+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035481 ID=XLOC_035481|Name=XLOC_035481|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4675bp|location=Sequence derived from alignment at sc0000270_pilon:282037..286711+ (Clytia hemisphaerica_ch_hm2_pilon)
GATTCCAGAGACAAATACAGCGGCAAAGCAGTCGATGTTTGGGCAATGGG
GATAAccttattttgttttctttacgGAAAGGTATATATCATGTTCAccg
attttttgcatgaaagtagggtaccatcataggtaaaagatggctcaagc
agattttttcaaaaaaattttgttggctcataaaacgcatctttatctat
aagaatcactattagtaagcatacatcaatgttcttagccaaattactca
atttttttatgtgatagatgtgtttttttgcttacgaagtcttgaatatg
aaagaatatttcaagagcatgaaattttggtttctaaacgtttttttaca
agaaacaaacgactaattttaatagatcgtcactatttgtgttctgaatg
attgtttaatggtcatgctcacgtagatatcaattatatatgtgttaaat
gcataaccaggtaggtccataaaagtatcacttgttagaCTGGTAACttg
ttctttctttctttcagtgTCCATTCTACAGTTCATTGATGGGCGAACTc
atcactaaaatcaaatcggAGCCGTAAGTTCATGGGgttaaactttgttt
tgataggCTTACGAAAGACTTAAAAGACAGCGAATTCTCAGCAAATTCAG
CATTTTTGGTCATTACTCAATATTAATTATTTGATATTACCATTATTATC
TACCAGTATGAAATTGTCTAACTTATGGTTCAGCTTCATTCAATATACCA
ATATCAGTTATATCAAATCTCTACTTCTTTATTTTAGACTGGTGTTTCCA
GAAAGTCCCATCGTCAACCCACAAGCCAAAGATCTGATATCAAGGATGTT
GGCGAAAGATCCTAAAGAAAGAATAAATGTTCTTGAGATGAAGGTATTCT
TATCGTTAATCTTTTGCTAATCAATTTTTATGCCTTCAAACCTAAACAAC
GAACAATCAAGCAAAGctagtttgttaaaatatcaaaatttgcaATGCgg
gatgaattttaaaatttgaagacaTAACAGCCAAACAATCACAAATGCTT
CTTGGATATGATTAAAACTGCTTTTCCTGGACTTTTTAAGGCTGATAATA
CTTCGCCACCATTTTAGTTTAGTGTTCATCCGGAGTTTCTTTAATAATTC
CATGCTATAGttaacccccttctcacagacccggtaggacttTTCAggca
gtggggataaaaataacggactgaaactcgatggggattcaTATTCCTAT
ACTTTTATGCTTGggtatttcaattcttttgtttttaagtcagaaaattc
cgTGGGGAtcggaaaaatagtaaatagtgaggattggtttaaaattagag
gataattttccaccgggacgatattttagccaatttttccagtggggagg
gGTCCGagagggtctgtgagaaggaggtatTATTGTAACCAACTTCGAAT
TACTCGCCATTACAGGAGCATCACTGGGTAACAGATGGTGGTCGTGTTAC
ATTAGCGGCAACCGAAGATCATTGTTCTGTTATTGAAGTCACTGATGAAG
AAGTCAAAAATAGTGTTAAAATTATTTCCAAACTTTCAAGTCTCGTAAGT
TtcgataagaattttataaaaaaagtctgCAACCGCAGTCGGATGCGACC
CGAAGGCTTTATTTGATAGCTATCAACCATACGACCCTTCCTTTATTCGC
TAGCTATCAATCcgaggtaggggagggcgccaccatttttgtactaaata
cgaagtctttggtatgacccagtcgagaattgaacccacgacctagcgcg
ccgtagccggatgctctacaaCTGCACAACGGTCGCattttaatcggatt
aattttcgcgagacttGGGTTGTTTATTTGTGTGAATTTGTTTGACTTTC
TCGCAGAATTAGATCTCGCGATGTGAGATAAAATACAGAAAATGCTGCAA
TCCTTTCGCACATGAAATctaatactttaatcgtagaaattttagcgaga
ctgattttagcgttttagcgagttttccctattttcgccaaaataaatct
cgctaaaacacgccgaatcgacagatcgctaaaatttatccacgcgaaat
ttctggttacattgccttgatacatttttatcaataggaagggtttcagt
gcaaagaaatgctagaaaacgaattaaatcaataatgtaatacgagtatt
cgctaaaatttatccacgcgaaattttttgaaatcgtgattcgctaaaat
aaatccaaaaaaaatcaagattttcctgactcgctaatattaTACGCtaa
aactagtcatagctttcactaaatgcccccacataaagatcatgtcatgc
acttataaagctttaatgctttaaagattaaacatttaaaaaataatcag
gaataattgattgatttaattattgattgattgattgattgattgattga
ttgattgattgattgattgattgattgattgattgattgattgattgatt
gattgattgattgattgattgattgatttattgattgattgattgattga
ttgatttattgattgaggcgtttgcttgaaaaaaaaaattatattccatt
ataaaaaaatacatacttgaagaattcatgcagcttgataacttaataga
atttaaggaaaagctggaaaagcctctcaaaaatatatttaaaaagttat
ggtatcattatcttactgattttcacatcacctgtttgtttgttttttct
tctagtttctttcttataacgatatatgtcatgattattattcactaaat
agaccttttctaataatgtcgcagacatcttagattgtaggcaaaatata
tggacatacgcagtgaataaatccacaagataaccaatcagaaatagctt
gtttttttcattggctgctatatttcaacatttctctattgctactttgc
ctaataaacaatagtcaagaggatactgcgtataaaatttatcaaaaagt
tctgtgccatcttaagttgggtgaaatagaatctcacttatcctagttaa
ggcccgggctccactagcgtacgctgtgattgcacttctcaagcaaaatc
ttctatgttgttggtcaaaagaaaagtaaaggaatgccattgtggttcat
taagacgtacagtcgagaaaagttaaaatgcgcctaaatttcttttcatg
atgcaatcttcctccaagctgatcgcagcgcagacaatgaagagacgtgc
cttcaggaagctagactttttgagtttatagctagcgatagactttccct
ttatggtgtttctgtatgactgtctgtgtacctagtctaaccaccgttaa
atgccttcgggaaggtttctcctaacttagaaagccagaatttggagcta
tttcaccaaaccactggagcgtaagttatttaggctatcacaactgcatg
aaaaagtttaacgtgcgcatgtaaagtttaacgagtaaacaaactttttt
caggtttttgaaaaagatttaccacactgaaaagacgtaagtgcaagtga
ggtaaattattttgaagaccaaaagaaaaagtcaaccacgtttggattca
actttacatgcGTACATTCatattttttgtactttgccggttgttttact
aagttaagaaggactttctcgagttacgaccatatgatggtatttaaagc
tcaagaagccctataaacaataaaggtagttatcaataaaatgacagaca
aaaataaattagagtttgaacaaaaatatcagatctacatttgaaaactt
aagcaaatttctttaaagattctggaaaaagaattgaaatcattgctgaa
gtgaacttctgactaaattacagtagttagtattcagtttcaaagacaag
aaacaaaatttgacatacaaaacactttttctagtcaattaatcagctca
tcatcatcataaccagtctgccattttgtttgttttgatttgcacaagta
atattgtaattcgtgttatatcatacaatGTTTTGacttgcatttataac
actcgcttcagcttttcaaagctaaatcaaaactaaaattgtaatatgta
ataatgataataccatataacgtaatatgaaaatatgtatactaccgtcc
cggaaaaaaacgaacatttacggaagagactaactacggatatgcttacg
cgacaacaacaacaacaacaaaacaattcgcaaaattttgagattccagt
ccaatatctatgcgtgaaactatgagtgcctcctcgtcgctacgctcctg
cgggggcaattagtCTCGCTagaatttctacgattaaagtataatttttt
tggttcaggtatTCATGAAAGTTTAAAAACCAATTCACAATTAAAAACTC
CCTGGGTTGTGTTTATTTACTTATACTTCTTTGGGAAgagaaaaaatact
tttccatTGTGAAAAGCTGATTTGGGGAAAATCTTACCTGAtcgttttta
attcaaattttcttaacgCTTTGATCACATTTATTCCGCTTAAAGTAAAT
TACgctttctttctcttttctagGTATTCGCAAAATCCATATTAAAAGGT
CGATCTTTCGTCCCTGGCagaggaaagaaaaacaaatggaAGAGGAATCA
CTCCTTACCAACCCCTAATTTATGA Coding sequence (CDS) from alignment at sc0000270_pilon:282037..286711+ >XLOC_035481 ID=XLOC_035481|Name=XLOC_035481|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000270_pilon:282037..286711+ (Clytia hemisphaerica_ch_hm2_pilon)
GATTCCAGAGACAAATACAGCGGCAAAGCAGTCGATGTTTGGGCAATGGG
GATAAccttattttgttttctttacgGAAAGGATTCCAGAGACAAATACA
GCGGCAAAGCAGTCGATGTTTGGGCAATGGGGATAAccttattttgtttt
ctttacgGAAAGtgTCCATTCTACAGTTCATTGATGGGCGAACTcatcac
taaaatcaaatcggAGCCtgTCCATTCTACAGTTCATTGATGGGCGAACT
catcactaaaatcaaatcggAGCCACTGGTGTTTCCAGAAAGTCCCATCG
TCAACCCACAAGCCAAAGATCTGATATCAAGGATGTTGGCGAAAGATCCT
AAAGAAAGAATAAATGTTCTTGAGATGAAGACTGGTGTTTCCAGAAAGTC
CCATCGTCAACCCACAAGCCAAAGATCTGATATCAAGGATGTTGGCGAAA
GATCCTAAAGAAAGAATAAATGTTCTTGAGATGAAGGAGCATCACTGGGT
AACAGATGGTGGTCGTGTTACATTAGCGGCAACCGAAGATCATTGTTCTG
TTATTGAAGTCACTGATGAAGAAGTCAAAAATAGTGTTAAAATTATTTCC
AAACTTTCAAGTCTCGAGCATCACTGGGTAACAGATGGTGGTCGTGTTAC
ATTAGCGGCAACCGAAGATCATTGTTCTGTTATTGAAGTCACTGATGAAG
AAGTCAAAAATAGTGTTAAAATTATTTCCAAACTTTCAAGTCTCGTATTC
GCAAAATCCATATTAAAAGGTCGATCTTTCGTCCCTGGCagaggaaagaa
aaacaaatggaAGAGGAATCACTCCTTACCAACCCCTAATTTATGAGTAT
TCGCAAAATCCATATTAAAAGGTCGATCTTTCGTCCCTGGCagaggaaag
aaaaacaaatggaAGAGGAATCACTCCTTACCAACCCCTAATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000270_pilon | genome | sc0000270_pilon:282037..286711 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 373-474:4574 |
| Aaloc | 244-372:1466 |
| Aaloc | 139-243:789 |
| Aaloc | 82-135:518 |
| Aaloc | 1-81:1 |
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