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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000417_pilon:141996..145400+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035476 ID=XLOC_035476|Name=XLOC_035476|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3405bp|location=Sequence derived from alignment at sc0000417_pilon:141996..145400+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAGAGATATTTGCGGTATCGGACGTATACGAGCATGCAGCTTC
CATTGGGAAAGACATCGAACAGATAGTCCAAGAATATGGAAAAGAAGCTA
TCGAAGGTGTGTATTCCACAAACTCGAATCCAGTCCTAACAATTTCtata
tatttctattattttggAAGAATTTAGTGGCTTATAGGCTACTTGGAATA
TATTCGATCCTAGCTTGATGGTCTAATCTTAAAGCTAAAAGTTAAAATTG
CACTTAAAAATAAGGTGTGGTTTTTGAAGTCTTACAGGGAATTCCCTTTG
TTTCAAATATCATCACCATCATTGTAGGTTTCTTTTTAGTATTCGAGCAG
GAACTAAGACACGTTCGATACATAAACCGTTTAAAATCCTTTCTTAATTT
CACAATAATATTGCCAAATAATATCATAATAACATAAACATAAAGTCTAA
CTTAACTTACACTTACTGTATTTCTACATTCAACTATACTTATTATTATC
AGATACGGGAAAACTAATATTCTTTTCACTCCATATATAGACATCATGCC
GAAGATTGTATACGTGTTGGAACAATTAGAAACGCTAGCAGAACGTCACC
AGGACGATCAAGAGAAACTAGCTGGTCTGATGATCGAACGTGAAAAATTC
ATGATCCATGCCAACAGAGATAAAGCTATACAACGGCAGCTTGAAGAGGT
AAGCTGTCTTTTCTAGTGTAACGATTAATAAAGTTTCATTAGTTTGGACG
ATATATATGCATAAAATACACAACCCTAGAATAGGccatacccagctggc
acacaacgttgtttcaacgtttatttaacgttcacaacgtccatataacg
ttagatgaacgttgaaataacgttgttcACCGGCTGGGTATGCGCCATCT
TTATTCAGTGTCACTTTAAAAATCCTTGTCTATTACCCTAACGGCAAAAC
GGTGCTTGGTCTTTTTAgtaactaattactccagcatAAATCATTTTAAT
GATAACATCATATGATTGATTTGTCTTCTGCAACAGAGCTGTCACCCAGG
GACATGATAATTTATCCCCTTTCTACTGGCTGAAGAAAAGGTATACTGGA
GTAAATTGTCATTCAATAGACCGTCACGTTCTCCTAAAcgactaccttat
cggggaaaacttcgtcggggaaaagtgacgaaattttggctaagtgacga
atatttttccccgacgaaaattttccccagccttaatgcgtttaccaact
accagcaagtgacgaatttttccccgacgaaaattttccccagccttaat
gcgtttaccaactacataccagcaagtgacgaatatttttccccgacgaa
aattttccctgacGAAGTTTTCCTCGATAAGGTattttgtttttcgattt
tatAGAAACTAGCATATATGGAAGGACTCGTCACAAAGGACAAAAAAGAT
ATGGAACAGAAGCTAAAACGGCTAGAACACGAAAACGACAGTCTAGTTGA
AGAACTTGAAAAACACGGTGACGGAGAATCAATCAAATCATCCAAGGAGA
AGAACAAAAGTGGTATTAAAACGTATTCTTTTACCTTTTATGGAGTTCTC
TCATTCTCCATCTCATTGCTTATTTCCATCTCGTTTACTTTCTATAACGG
TACGTCGGACCTTATATCGAATATTTGGTCTTTGCCATGATAATATAGAT
TCTGATACTAGAATGACGAGAAAAATGACAATAAAATTACATTTAACTAA
AACACCGTACAAAGTACACTGAAATCGACGAATTACGCGTTCAACATAAC
CTGATTGACCAAATTGACtaatgttaatatttttttgtttattatatCAT
TTgggcaagttcatttttatgaaatattattCTCTACGTACATATAATGC
AGATACCAAAAACCTTCTTACACAAGTTATTAGGGCCGACAATGAACCGA
TGTTTTATATTTTGCGCAAGGATCAGCATGTAAAAAATGGAAATACTGTA
CTTCTcctgtatacacgtttttttataagaataactaaaatttttgaagc
ctccGgATGTTCTTAACTTTGAgttctaagcctaaaaatgttcttaacat
gttcttattttcacaatcttttgagtatttttgtccatttcctaAGACAT
tttgagtctgcaaagccttaaagtgttcttaAtATTTTTCCCTTCGAaga
cttatgttcttacattgtttgttcttatatagtttattcttatatagttt
gttcttataaaaaaacgtgtagtatttgaagaaagagaatttttttaccg
CCAGTTAGGGTTACTTTCATAAGTGAGGGGTATTTTTCATCTCCTCTAAA
CGTTGGAAACCATTACAAGACTAGCTATATGACTACCACACATAACACTC
CAGCCTAATTATAGAAATTGAAACGTTGTTTATAGCTGATGAAGGTTACC
CCTCTTTTGTTGAGGTACCCCTCTTTTGTGGAGGTACCGCTgtttttttt
aggtacccctCTTTTATTGAGGTACCCCTCTTTTGTTGAGGTACCCCTCT
TTTGTTGAGGTACCCCTCTTTTGTTGAGGTACCCCTCTTTTGTTGAGGTA
CCCTTCCTCCGCCTCATCAACAGTATTGATAAAGTTCCTTCGAACGCGTT
GTTGGGAAGTCTGAAATCTTTTCAGCATACAGGCTAAAACTCACGCACAC
AGCACGTATTAGTTATATTATGAAAACGCACGCACACTTTAATCCGACGT
CGAACGTTTATGTAAAtgatatatttttgtaaataatagttttttctact
ctaattttttttttgaaaaaatgggcGTTTTCAACAGTTTACCCTTGGTC
CGATTAATAATATTGATTtctatttcaaatgaaaatattacctgaattta
ttttgcttttagCTTTTCAAACTCGCTTCAAAATTGATAATTAGTACTTG
AGTAATTTTACTACTGTTCCCATTAAAGGGAACTAATGTTATCGAGGGAA
AGAGGGCGTATGTCACATTTTGATGGTCTTAAGTAACATCCaaatttatt
ttagtttttcttttcgtAACATTAACGACGCAACTTAACCGTGGACAATA
CTGTACTTGTCTTTGTTaaccattttattttttaaggcaaaaagaaAAGA
CAGTTCTTCTTTTGGTTAATGGATGCAATATTGAGTGGGAAATTGTCTTT
TTATAAAGGTACAAGTTTTTCACGCAAGCACAGTGAGATGAAACAATTAG
TTAAAAATATCGGAAGCGGTCCTTTCTATTGGGTTATTCCAAatatagtc
tgtaccccctttGTTGAGGAGGTgagacgtccagggtggtcttctttttc
gattttaaaaatccagggtggtcagcaaaatgaggttgaaaatccagggt
ggtaa Coding sequence (CDS) from alignment at sc0000417_pilon:141996..145400+ >XLOC_035476 ID=XLOC_035476|Name=XLOC_035476|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1380bp|location=Sequence derived from alignment at sc0000417_pilon:141996..145400+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAGAGATATTTGCGGTATCGGACGTATACGAGCATGCAGCTTC
CATTGGGAAAGACATCGAACAGATAGTCCAAGAATATGGAAAAGAAGCTA
TCGAAGATGGAGAAAGAGATATTTGCGGTATCGGACGTATACGAGCATGC
AGCTTCCATTGGGAAAGACATCGAACAGATAGTCCAAGAATATGGAAAAG
AAGCTATCGAAGACATCATGCCGAAGATTGTATACGTGTTGGAACAATTA
GAAACGCTAGCAGAACGTCACCAGGACGATCAAGAGAAACTAGCTGGTCT
GATGATCGAACGTGAAAAATTCATGATCCATGCCAACAGAGATAAAGCTA
TACAACGGCAGCTTGAAGAGACATCATGCCGAAGATTGTATACGTGTTGG
AACAATTAGAAACGCTAGCAGAACGTCACCAGGACGATCAAGAGAAACTA
GCTGGTCTGATGATCGAACGTGAAAAATTCATGATCCATGCCAACAGAGA
TAAAGCTATACAACGGCAGCTTGAAGAGAAACTAGCATATATGGAAGGAC
TCGTCACAAAGGACAAAAAAGATATGGAACAGAAGCTAAAACGGCTAGAA
CACGAAAACGACAGTCTAGTTGAAGAACTTGAAAAACACGGTGACGGAGA
ATCAATCAAATCATCCAAGGAGAAGAACAAAAGTGAAACTAGCATATATG
GAAGGACTCGTCACAAAGGACAAAAAAGATATGGAACAGAAGCTAAAACG
GCTAGAACACGAAAACGACAGTCTAGTTGAAGAACTTGAAAAACACGGTG
ACGGAGAATCAATCAAATCATCCAAGGAGAAGAACAAAAGTGgcaaaaag
aaAAGACAGTTCTTCTTTTGGTTAATGGATGCAATATTGAGTGGGAAATT
GTCTTTTTATAAAGGTACAAGTTTTTCACGCAAGCACAGTGAGATGAAAC
AATTAGTTAAAAATATCGGAAGCGGTCCTTTCTATTGGGTTATTCCAAat
atagtctgtaccccctttGTTGAGGAGGTgagacgtccagggtggtcttc
tttttcgattttaaaaatccagggtggtcagcaaaatgaggttgaaaatc
cagggtggtaagcaaaaagaaAAGACAGTTCTTCTTTTGGTTAATGGATG
CAATATTGAGTGGGAAATTGTCTTTTTATAAAGGTACAAGTTTTTCACGC
AAGCACAGTGAGATGAAACAATTAGTTAAAAATATCGGAAGCGGTCCTTT
CTATTGGGTTATTCCAAatatagtctgtaccccctttGTTGAGGAGGTga
gacgtccagggtggtcttctttttcgattttaaaaatccagggtggtcag
caaaatgaggttgaaaatccagggtggtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000417_pilon | genome | sc0000417_pilon:141996..145400 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 424-690:3139 |
| Aaloc | 265-420:1406 |
| Aaloc | 109-264:543 |
| Aaloc | 1-105:1 |
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