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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000270_pilon:127209..131128+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035474 ID=XLOC_035474|Name=XLOC_035474|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3920bp|location=Sequence derived from alignment at sc0000270_pilon:127209..131128+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGAGAGAAGAGCAAAACACAGAGGAGACGCTTGCTAAAAGTCCCTCCTT
CTCCATGACGAAAAGTTTGAACGACTCCAAACTCTTAGATGCAACTGCCA
GCATCAAGAAAATGGCTCTCGTTGATACTTCTAGTTTGGATGGTAAATAT
TGTTCCGATTTTATTTTTAACACCGAATGGGTTTTTGTTTGTGCTGGACC
CATTTTGATAAATGCttttttttACATTCTATGCGATAGAAtatcatatt
tccatatttccaTAGCACTTTTAAGTTTGACCACAGTCGAGGGCGATCTA
GAGGCTTCCGTTTTGTTAGGGGGTAACTCCTCTCCCTGGATTTCTTGATT
CTTTCTTTCATTGCTGTATCAAGCAGAGTGACATCAATGACCACTTTGTA
AGTCTCTGTCATTTCCCGGAAGTGATGATTGTATGATTGTATGATTGTAA
TTTCGTTGTCATAAAAAAGTGTGAttattatgttttctttttctttttct
cccaAAGACGATGGCACGGGGAGTATTGCAGCCTCTGTGCGTATTGAAAA
AGCTTTATCAGAAGCGCCTAGTGGAACTCTAACCACCACACATCAAGTTG
GCATGACACGCACAATCGCTATGTTATCCAAATTGTGGCTTATCACTGGT
AAGCCAACGTTTGATTCGTATCACAACCATAtttttttACTAtcttattt
taatttcaaacagTCCCGGACTACGCACGTTTTTATGAGAATGTAAtcta
ttcatgatgaaatttgccaaagaATTTAGAATATACTAAGAATGTCACCA
TCCTGAAATTTACTGATACTGAGAATggcatttttagagcattttacctG
TGAGggaatatacacgttttttttaagaaactagttttaccaagcagcct
caatgtttcttaagaaatcggccttttgagccttaaatgtttctttcatg
tttctaaactttttgacataatcagcctatttttcattcaaagaaaataa
atatttgttttgattggaaggttcttaaaaaaaatgaattaaaaaatgtt
attttctcattctcagcctcagcatgttttttagatgtttcttagttttt
aggcattctgagcatCATGTTTcataaaagtgtgtttcttaaaaaagaaa
aaacgtgtttgCGCGTTTTTTACTTCTGACAAAATGATAAGCTGACAAAC
ATTACATTGTACGAAAATTCTGCTTGCCTTATTTTAAACGATATTTCAAG
TATGAAAAATATGTAGTCTGATAGGAGTCAGTATGATGGTGACGTAATAG
GCTAAATTTGTAAAAAGTTGGAAAGGGGGGCTCAAAactgtgaaaaatct
ttttgatgtctttttttttcttagcgGAATGTTTCATCAATCTGGAGGAT
GCGACGCAAGCCGGTGGATGTATCTTGGAAGCGTCTTCAATTTTCCCTCT
CTCTCCTGATGTTCTCTATATGGTATGCTCCTCCAAAACATTCTTCTTTC
TTACAGGGTGTCcataaaaaagacaataaatGTAATTCACACATTTTAAC
GATGgaacattccattttatatccatacacgGGAATTGACATTCCCAggg
aataaaaaatattttaaggggGTTTTCATTCGTCCATCGTCACTTTAagg
tataaaaataaattaagagttttttcgcaaattttgcaGGGGGTATCCGC
ACATTtccatgaaatatttttttgacttgaaattatggaattggaatggc
ccaatttaGTTTATATAACAATGAATTATTAAATTATATACCATCACTTT
CACACAGTCAACTTTTAGAATGACATCCGTCTATCTGACGGCCTTATGTA
TGTTCAAAATGCTGGTCCGATTGACTGAAATGTGACAGGCTTGTTCCTtg
ggaatacacgtttttttttttattagaacacctaaaatttggctgagcct
ggatgtgcttatttttttagcaattttcagcctaaaatgttcttaaatgc
gttcttaatttttcagactactctaaatcgataatatgatacaaaataaa
gagcacttaaatttggcaaaatttggacaatatttttttttaaatatttt
acgttcaaaaagttttgtacaAAATAATAAATTGGGAATGATTTCTTAAG
GGAATATTGTAATGCATTGGAgaccacccctaaattcggttaaaactgct
taaaaagaggaaaaaattgtagtttcttgtcattttttccaaactgaggc
tgggcatgttcttaagatgttcttaatttttcgacgaatttcagcctata
tgttcttataaactaggttctaataaaaaaaaaacgtgtacccggGGTac
tttttgaaaacgaggctagCACTTTTGGTTAGCCTGGAcacttaaaaaaa
tgaaaaaaatattcgacCATTTAAGTCTTGTTACCTATGTTTGCTTTCCT
TGTAGAGAGGCCGTTTAAATGAACTCCAAGAGAACACTTTGGAAGCCATC
GCTTGTTATGAAAGCGCGTTATCCATACATCCACATCACAAAGCTGCTCG
CCAAAGAGTGGTGAGTATATTAACTTATAATAAGCCTTCGCTTCTTCATT
ATGCAAACTGATGAGTGAGATAGTGtttcattaaagttttttttgaaaaa
aaattgcctaATCGGTTATCAGCTTGATTTTTCCCAACTCTTTTCATTCA
TAGGAGGTCTCAAAAATTGTTTATCCGTATTCTGTGAAATTTCtgtattt
ttaatcaaacttatTCTTCTTTCAGGGTTTGTTATACCACGAGAGAGGAG
ACTGTGCACTAGCTGAAAAGATTCTCAGAGCATGTATTCTGTATGATACA
AGCAATCATACTGCTTGGTAAGAAGAAAATTCACTCTCCGATTGCTaatt
aggctgcacgcatccccagaatttattttgttataggggatgcgtatcgt
gtatgaaattctcgtccgagagttacctcaaatttggggtaaccgaaagt
tgcataaatttacataattttgttACATCCAAtcacagaaagagaaaaat
gacgtcattgtgttattgctttcataattataaattttcattcattaaac
aaagaaaaagagaagtcGTTGTACAGCTGTGacacataatcaaaaaagag
aaaagaaaagacgggggtaagctGGGACAGGAATATCttagacgatacgc
atcccctatatcaaatcatatcagaggggatgcgtgcagcctaattGCTa
atgagcttttccagaaaaatttgaatatgggggatttaggatataacatt
ttttggaaatttaccgcCCGGACATAGTGGcctttgaccccccccccccc
ccccggacagcaggtctaaccccctggGCAagcaaacaaaggaaaattac
CGCCAAACCTGCGCTTAcggccaaatattttaggtttttagttttaaatt
ttcagtttgatcGACAATTTGGTTCGGAAAATTTCCGAAGGAATCGAAAG
ATTTCTAAAAAGGACTTTGACCGCTAATAACATGTTTGTTCGAAAAACAA
TGGCCAAGTTCCGGTCTTTAGCCGGTAAATCGtaaaataatgtttaaaaa
aattcgaacTATCGTATACAGGATGTCCGGCGGCAAATATTGAGACAAAG
TTCTTTTCAGTCTTTCAATCATTCATTATCCATTACAAGTTCTATAATAC
CCCTTAAAgtataaacaaactttttatagaatttatTATAAGATTCATTG
GAGAtatacatttttcttttaggAACGATCTGGGTATTGTATTGGAGTCA
ACTGGTCGGTTTGATGAGTCAGCAGATTGTTTCCTTACTGCTCTTAGACT
GGAAGGTTCGGCTCCAATATCCAGTTTTACATCAATACCGCGCGCTTTTA
GAGCATTTGACACATCGTAA Coding sequence (CDS) from alignment at sc0000270_pilon:127209..131128+ >XLOC_035474 ID=XLOC_035474|Name=XLOC_035474|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1452bp|location=Sequence derived from alignment at sc0000270_pilon:127209..131128+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGAGAGAAGAGCAAAACACAGAGGAGACGCTTGCTAAAAGTCCCTCCTT
CTCCATGACGAAAAGTTTGAACGACTCCAAACTCTTAGATGCAACTGCCA
GCATCAAGAAAATGGCTCTCGTTGATACTTCTAGTTTGGATGAGGAGAGA
AGAGCAAAACACAGAGGAGACGCTTGCTAAAAGTCCCTCCTTCTCCATGA
CGAAAAGTTTGAACGACTCCAAACTCTTAGATGCAACTGCCAGCATCAAG
AAAATGGCTCTCGTTGATACTTCTAGTTTGGATGACGATGGCACGGGGAG
TATTGCAGCCTCTGTGCGTATTGAAAAAGCTTTATCAGAAGCGCCTAGTG
GAACTCTAACCACCACACATCAAGTTGGCATGACACGCACAATCGCTATG
TTATCCAAATTGTGGCTTATCACTGACGATGGCACGGGGAGTATTGCAGC
CTCTGTGCGTATTGAAAAAGCTTTATCAGAAGCGCCTAGTGGAACTCTAA
CCACCACACATCAAGTTGGCATGACACGCACAATCGCTATGTTATCCAAA
TTGTGGCTTATCACTGcgGAATGTTTCATCAATCTGGAGGATGCGACGCA
AGCCGGTGGATGTATCTTGGAAGCGTCTTCAATTTTCCCTCTCTCTCCTG
ATGTTCTCTATATGcgGAATGTTTCATCAATCTGGAGGATGCGACGCAAG
CCGGTGGATGTATCTTGGAAGCGTCTTCAATTTTCCCTCTCTCTCCTGAT
GTTCTCTATATGAGAGGCCGTTTAAATGAACTCCAAGAGAACACTTTGGA
AGCCATCGCTTGTTATGAAAGCGCGTTATCCATACATCCACATCACAAAG
CTGCTCGCCAAAGAGTGAGAGGCCGTTTAAATGAACTCCAAGAGAACACT
TTGGAAGCCATCGCTTGTTATGAAAGCGCGTTATCCATACATCCACATCA
CAAAGCTGCTCGCCAAAGAGTGGGTTTGTTATACCACGAGAGAGGAGACT
GTGCACTAGCTGAAAAGATTCTCAGAGCATGTATTCTGTATGATACAAGC
AATCATACTGCTTGGGTTTGTTATACCACGAGAGAGGAGACTGTGCACTA
GCTGAAAAGATTCTCAGAGCATGTATTCTGTATGATACAAGCAATCATAC
TGCTTGgAACGATCTGGGTATTGTATTGGAGTCAACTGGTCGGTTTGATG
AGTCAGCAGATTGTTTCCTTACTGCTCTTAGACTGGAAGGTTCGGCTCCA
ATATCCAGTTTTACATCAATACCGCGCGCTTTTAGAGCATTTGACACATC
GTAAgAACGATCTGGGTATTGTATTGGAGTCAACTGGTCGGTTTGATGAG
TCAGCAGATTGTTTCCTTACTGCTCTTAGACTGGAAGGTTCGGCTCCAAT
ATCCAGTTTTACATCAATACCGCGCGCTTTTAGAGCATTTGACACATCGT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000270_pilon | genome | sc0000270_pilon:127209..131128 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 580-726:3774 |
| Aaloc | 487-576:2776 |
| Aaloc | 382-486:2456 |
| Aaloc | 286-381:1377 |
| Aaloc | 145-282:510 |
| Aaloc | 1-141:1 |
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