|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1264458..1268474- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035463 ID=XLOC_035463|Name=XLOC_035463|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4017bp|location=Sequence derived from alignment at sc0000038_pilon:1264458..1268474- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTACTGTGGCTTCAACAACACCCCATGTTGAAGTTACAGCTGTCAA
GGGAGATTTCTATGCGAAATATGAACCAGGAGATATCTTAGGAGAGTAAG
TTACATTTCTGCTTTTGTCAGTAGAAGAAAATTAATTAACTCTATCAGAT
CACATTACAAAATCAGTATTATAACTTGTTATTTATCTAATTTAAAGCAT
GAAAATGGTTTTGATTTCGACTCTGGTGAATGTTTGTAAAGTATAATTTT
CTTACCATTTGTTTATGTTTGTTTACAGTGGCATATCAAGTGTGGTTCGA
AAATGCAGGAACAAAGAAAATGGGGAAGAATTTGCGGTCAAGATCATAGA
CAAGTTCAGTAAAAAAGGACAGGTGGTGAAAGGAATCGATATTGTCACAC
AAATTCATAATGAAGTTGAAGTTTTATCAAAGCTTCAAGGCTATCCTGGA
ATTAGTAGGCTAAAATTACCATCATTCTTTAATTTTCTTTAATTTTCTGA
TTTCTACAGGCAAACTCCTTGTTTTTCCTTCTTTATTACCTTATCATTTT
CCAAGGCTGACATTGAATTTATTCTGCTATAAAGTCCAGATGCCTTCCAT
ATAATACTCTTGGGTACCTAGTGTCCCCCCACGCAATTTAATTTTTTGAA
AATTTTTACCCAGGGACATTTTTATTCCAACCCCCTACTTATTAACTTTT
GAGAATTTCTCCACCCACCCCGCTTATTCCTAACCCCTGGTTTGTTAGCT
ACCCAAGAGTACTTAATAGTTGTTATTTTCATGATTTTGACAATTTCTAC
TTTCAGTCAAACTGGTTGATTTCTATGATAGCTCAGCATTCATGTTTTTG
GTTTTTGAATTGTAAGTAGAAATATTTAATCAGAGGTTTTTATATAGTTT
TGTTTTTAATTTTTTTAGATTTTAAAATTTATAAATGAATTGTTTTTTAT
ACTAAATATCTCATACCCTGATTCCTCGCCATCTTTTTAAATCTCTTAGG
TTCAATATCAATTACTCCAAAACACTTATTTTTTCAGGGCAAAAGGTGGA
GAGCTTTTCGATCTGCTCACACAAGAAGTGACAATCCATGAGCGGACTGC
CAGGTAGAAACTAAAAAGTGTTAACACATTTCCCCTTTCATTTTTACCAT
TCTTTAGACCACACTCAAACCCAGTACTAGCATCTAACAAAATCCCAAAG
TCAAATGAAACAGCTTCTTACTAAGTCAAATTAAACAGCTTCGAAATATT
TAGAGGAATTGAGAAAATCATCTTCTGCCATAATTAGTTCGGTCACATAA
TGTCACTAAAAGCTTGTCCTCCCTATTAAGTCCTTTTTCTCAATAATCTC
TCTCTCTACTAGATACTCCAAAGTCTATGGACATTATGGCTGGTGTTTTC
TAGAGCACTGTTTATAAGAATGAACATATTTTTTTGTATTTAATTCACTC
TAAAAGTGTTATTTTTATATTTTAGGAGGATCATGTGGCAATTGTTCCAT
GCCTTATACCACATGCATGAAAATAGTTATGTTCATCGAGATTTGAAGGT
ATCATATCTCTTCATTTCCAAAAACCTTGTGTTTGGTTGACAGGGCTAAC
TAGTAGATTTTGAATACCTTATTGATAAGTGACTATTTTTTTTGAGCAAG
GTCTTTTTTGATATAAAAGGTAGATTTATTCGCTACAAACCTAATTAATA
TTTTGCTTTTTATTATCTTTTTGTACATTCTTGGCAAAACAAAATGTGTA
AATGATTTATCATTAAACATTTTTGACTTTTTTTAGCCAGAGAATGTATT
GTTGGACAGTGAAAATAATGTCTTATTGTCTGATTTTGGATTTGCTCACA
AGATTCGTAAAGATGAACAGCTTTTTGGTGAGCATGATTTTTGCAAGTAG
AAACTTCTGTAATGGTCTTTTTCAATGGACCATGAATTTTCTTCGAATTA
AAGAGAGATTTGCGTCACAGAGTATTTTATGCGGATTTCCTGTTGTGGGG
AACAATTTTTGAGATGTTAGATGATTTATTTTGAGTGATTTTTTTTTTTT
CAGATGTTTTAGGTACTCCAGCGTACTTTGCTCCGGAGACTTTAAAATGT
GTTGTTTATGATAACGCAACTGGTTATGGGAAGCCTGTCGATTTGTAAGC
TTTATACTTCTTCTTCTTAATTACTTTTTATTATTTTAGTAATTTAAAAC
CTTTTGTGTTACTGGGTCTCCTTAAAATAAAGCCTTGTAAAAAACTGTTG
CTAATTTTACAATATTTCTTACTAGGTGGGCTTGTGGTGTCATTCTTTAC
ACTCTGTAAGTAACTGGTGTTTTTAAGTATTTGTATCTCATAATTATTTT
TTCAACTTGCAACAACAAAATTTGATACTGATATTCCAACTCTTTCAAAC
CTTTTAATCGTTTTAAATGAATCATCTTGAAATGCGTCAATGACAAAGTT
GAAAAATCATTTCAGGCTTGTTGGACAAGGTCCTTTTTGGCACCGGAAAG
ACACAATAATGTATCGAAAAATCATGGAAGGAAAATATAGTCTAGCAGGC
GCTGAATGGGAGGGAATTGGTGAATGTCCTCAGGATCTGGTGTGTCTCAA
ATTATTATTTAATTCTTGTATTTGTCTGCTAATTTACTATTCACTTTTCA
AATTTGATTTGGGTATGCTTTTTGTCTTTGAATGCTAATTCCATTTTCAG
TATTTTCGATTTGGGGTTTAGTAACCATGATCTTAAATTTTTTTAAATAA
TCAAAGTTCAATTCTGAATCACCCCCCTTTAAACATTTTGTAAAACAATG
TATCATAAATCAGCCTTTTTTCTTTTTTAAAGATATCACAGCTTCTGGTT
GTTGATCCAAGCAAACGCATCAATGCAATGGATGCATTATGCCATCCCTG
GTTCAAAGGTTTATCTGTTTGTCACAAGTGTGAGGTATTATAAATTTTAG
ATCCCTACAATTTGCTGTTGAAAGATTTTATAAGTAAGCTGTAAGATTTC
TCCTGTTAAGGATCAGTGCAGATTGCGTTAGTTTATTGTACCTACTCATG
ATATGCGTCACTGGAGAGTCTTCTGAGAATTTTCCACCCAATACATCACT
TAAACAATAGAAAAAGTGACGTAATGGGTGGAGAAAAAAAACAGAAAAGC
TGCATAATTTCGCGAAGTCATTGCAGTGGTGCATATCATGAATTGCACTA
ATATTTCCATTTTTCACAATGATACACTCCCTCATTTATCCCAATGGATT
AATTCATCATTACTTTCAAATCTTAGAAACTTCAACAAGCTTTACCTAAG
AGACAAAGGATCAAATTTAAGGTAACTTTTGTGTCCAACATCATTTTGAA
TTGAAATATTTATTACACCGACTGTGTTCGACTGGATTTAATGTCAAGCC
ATATTTTGGAAAGACAGGGCAGTGTCTGTTAGTGGCCAAAAGGGGCAGTT
TTTTTAAGTGTTTTTCCACGAAAAATGTTATTTTTACCAAAGTTTTAGTG
ATTTCAGTAGGGGCAGCATCCGATAACTAGATTCTAAAAGGGCATGAAAA
CGGGCATGGATGTATCTAAGAAGAGCAAAATATTTTTTTCTTTTTAGTAA
GCTTTTTGTTATTTTTTACAGGTTTTAGTTTGCACTATCATGACAATGAA
GAAACTGTATTATACATTCCATGAGAGGTTTATACCGCAGACTTATAGTA
GTGTACTAAAAGAACCGTATAATTTTAAAGATGTTCGTAAAATAGTGGAT
AGTTGCTCTTTCAATTTGTATGGTCACTGGGTGAAAAAGACAACAGATAA
CAACCAGAGTCGAACAGCATTATTTGAAAATACCATCAAAAATGAGATAG
TTAGTAGCGATACTGTGGATGGGCAGATCGTTATACCAACTATGTATGCT
TATGGCATCCAAAGTGCTTTCTTACCTAAAAGACCATCTTTTATTCGAAA
AGACTCTTTTCAGGATAAAGGTTCATCACCAAGCTCAAGTTATGAGCACC
GGATGGAATCAATTTGA Coding sequence (CDS) from alignment at sc0000038_pilon:1264458..1268474- >XLOC_035463 ID=XLOC_035463|Name=XLOC_035463|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2688bp|location=Sequence derived from alignment at sc0000038_pilon:1264458..1268474- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTACTGTGGCTTCAACAACACCCCATGTTGAAGTTACAGCTGTCAA
GGGAGATTTCTATGCGAAATATGAACCAGGAGATATCTTAGGAGAATGGT
TACTGTGGCTTCAACAACACCCCATGTTGAAGTTACAGCTGTCAAGGGAG
ATTTCTATGCGAAATATGAACCAGGAGATATCTTAGGAGATGGCATATCA
AGTGTGGTTCGAAAATGCAGGAACAAAGAAAATGGGGAAGAATTTGCGGT
CAAGATCATAGACAAGTTCAGTAAAAAAGGACAGGTGGTGAAAGGAATCG
ATATTGTCACACAAATTCATAATGAAGTTGAAGTTTTATCAAAGCTTCAA
GGCTATCCTGGAATTATGGCATATCAAGTGTGGTTCGAAAATGCAGGAAC
AAAGAAAATGGGGAAGAATTTGCGGTCAAGATCATAGACAAGTTCAGTAA
AAAAGGACAGGTGGTGAAAGGAATCGATATTGTCACACAAATTCATAATG
AAGTTGAAGTTTTATCAAAGCTTCAAGGCTATCCTGGAATTATCAAACTG
GTTGATTTCTATGATAGCTCAGCATTCATGTTTTTGGTTTTTGAATTTCA
AACTGGTTGATTTCTATGATAGCTCAGCATTCATGTTTTTGGTTTTTGAA
TTGGCAAAAGGTGGAGAGCTTTTCGATCTGCTCACACAAGAAGTGACAAT
CCATGAGCGGACTGCCAGGGCAAAAGGTGGAGAGCTTTTCGATCTGCTCA
CACAAGAAGTGACAATCCATGAGCGGACTGCCAGGAGGATCATGTGGCAA
TTGTTCCATGCCTTATACCACATGCATGAAAATAGTTATGTTCATCGAGA
TTTGAAGGAGGATCATGTGGCAATTGTTCCATGCCTTATACCACATGCAT
GAAAATAGTTATGTTCATCGAGATTTGAAGCCAGAGAATGTATTGTTGGA
CAGTGAAAATAATGTCTTATTGTCTGATTTTGGATTTGCTCACAAGATTC
GTAAAGATGAACAGCTTTTTGCCAGAGAATGTATTGTTGGACAGTGAAAA
TAATGTCTTATTGTCTGATTTTGGATTTGCTCACAAGATTCGTAAAGATG
AACAGCTTTTTGATGTTTTAGGTACTCCAGCGTACTTTGCTCCGGAGACT
TTAAAATGTGTTGTTTATGATAACGCAACTGGTTATGGGAAGCCTGTCGA
TTTATGTTTTAGGTACTCCAGCGTACTTTGCTCCGGAGACTTTAAAATGT
GTTGTTTATGATAACGCAACTGGTTATGGGAAGCCTGTCGATTTGTGGGC
TTGTGGTGTCATTCTTTACACTCTGTGGGCTTGTGGTGTCATTCTTTACA
CTCTGCTTGTTGGACAAGGTCCTTTTTGGCACCGGAAAGACACAATAATG
TATCGAAAAATCATGGAAGGAAAATATAGTCTAGCAGGCGCTGAATGGGA
GGGAATTGGTGAATGTCCTCAGGATCTGGCTTGTTGGACAAGGTCCTTTT
TGGCACCGGAAAGACACAATAATGTATCGAAAAATCATGGAAGGAAAATA
TAGTCTAGCAGGCGCTGAATGGGAGGGAATTGGTGAATGTCCTCAGGATC
TGATATCACAGCTTCTGGTTGTTGATCCAAGCAAACGCATCAATGCAATG
GATGCATTATGCCATCCCTGGTTCAAAGGTTTATCTGTTTGTCACAAGTG
TGAGATATCACAGCTTCTGGTTGTTGATCCAAGCAAACGCATCAATGCAA
TGGATGCATTATGCCATCCCTGGTTCAAAGGTTTATCTGTTTGTCACAAG
TGTGAGAAACTTCAACAAGCTTTACCTAAGAGACAAAGGATCAAATTTAA
GAAACTTCAACAAGCTTTACCTAAGAGACAAAGGATCAAATTTAAGGTTT
TAGTTTGCACTATCATGACAATGAAGAAACTGTATTATACATTCCATGAG
AGGTTTATACCGCAGACTTATAGTAGTGTACTAAAAGAACCGTATAATTT
TAAAGATGTTCGTAAAATAGTGGATAGTTGCTCTTTCAATTTGTATGGTC
ACTGGGTGAAAAAGACAACAGATAACAACCAGAGTCGAACAGCATTATTT
GAAAATACCATCAAAAATGAGATAGTTAGTAGCGATACTGTGGATGGGCA
GATCGTTATACCAACTATGTATGCTTATGGCATCCAAAGTGCTTTCTTAC
CTAAAAGACCATCTTTTATTCGAAAAGACTCTTTTCAGGATAAAGGTTCA
TCACCAAGCTCAAGTTATGAGCACCGGATGGAATCAATTTGAGTTTTAGT
TTGCACTATCATGACAATGAAGAAACTGTATTATACATTCCATGAGAGGT
TTATACCGCAGACTTATAGTAGTGTACTAAAAGAACCGTATAATTTTAAA
GATGTTCGTAAAATAGTGGATAGTTGCTCTTTCAATTTGTATGGTCACTG
GGTGAAAAAGACAACAGATAACAACCAGAGTCGAACAGCATTATTTGAAA
ATACCATCAAAAATGAGATAGTTAGTAGCGATACTGTGGATGGGCAGATC
GTTATACCAACTATGTATGCTTATGGCATCCAAAGTGCTTTCTTACCTAA
AAGACCATCTTTTATTCGAAAAGACTCTTTTCAGGATAAAGGTTCATCAC
CAAGCTCAAGTTATGAGCACCGGATGGAATCAATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1264458..1268474 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 949-1344:397 |
| Aaloc | 904-948:742 |
| Aaloc | 802-903:1186 |
| Aaloc | 679-801:1552 |
| Aaloc | 649-675:1742 |
| Aaloc | 559-645:1963 |
| Aaloc | 466-555:2232 |
| Aaloc | 394-465:2542 |
| Aaloc | 328-390:2980 |
| Aaloc | 274-324:3210 |
| Aaloc | 97-270:3739 |
| Aaloc | 1-93:4018 |
|
