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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1188950..1193904+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035458 ID=XLOC_035458|Name=XLOC_035458|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4955bp|location=Sequence derived from alignment at sc0000038_pilon:1188950..1193904+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGGGAAGAATTTAGAAAACAAATATATCCACTCAATCATGAATTCTTT
AACAATCACACTCCAAATTATTTTCTTACTCCAAATTTTCACCGAAACAT
CCTCTTCGTCCTTCGAATGTACAAACCGATTCGAATATCGCCACATGTTG
AAATCAAAAGTTCCACAATGGGGAAATTGTACTTACATAGTGAATCATTT
TCCCATGTGTAAACCAGAGGTGGAAGTATGGTACCGCCATTTACCACCCT
ACGTAGACAAGCAGAACGAATCACAAGTACATGGGCTGATACCAGGTAAA
TTTGATTTCAATAAGGTCGCGTTTGTTATATTTTCGAAGTTGAAAACATA
ACGTCAGTCATGCGCGACTTGATTTTTTACCAACGATACCATATTTAATA
ATTTAAGATTTAATTCTGGGTTTGTATCGACCGACTAGTTTCAACTCCAG
accattgattttttttagtctccttcattttcaaccaatctaagcctttg
attgatttttgatcaggtttttgatcacttttttgaACGTGAAGCATCAT
TTTATCATACTCACATATTCGGACACACCCCTTACAATGGTAAAATCAAT
CTTTGTTTTTCCACAGAGATGTTGCGTCAGGTTTACGAAACATGTTGTAT
GGGTTGTACCAAAATCAACTTCAAGaattctgatgacgtcatcgatatTT
TGTTCAAACCAAATCTCACATTGGGAATGCCCTTTGAATCTGCACTAGGT
TTGTATATTGTGTACAGTTGATGTTCTCAGATTCCATTCTCAAAGGGAAT
ATAGGATTCCTTCGAATAGGGGAGCGTATCGAATGGCAGAGCGTCTTTTA
TGAGAGTTGCTCGCTGAAggtggctttcaatattatcaattaATGGAACG
TTATCGAATAGGTGAACGTCAAATTAGAGTGTGCCAACTGTAGTATGAAT
TAAGTTTTGGTTTACGCCAATTTTCACCAGATTTGAAGTAGAAAGCTTAC
CaaaaaaactcataggaatcttttgaacGAGAATAAAAGTTCACACAAAC
TAACAACGAGTCCTTGTTTTCAATAATACATAACTAAAGATGAAAAAGGA
CTACTTATTTATTCGGAATAGCAAGCTGATTTTCAACGCACGCTTCATTG
CGAGCTTCAAAAGGCCTGATTAAGGATGGTAAAAATTCTTCCATAGGTAG
TAAGAAGATTTCTGGCAAACATTACGTCAACTTTCTTCAATCACACAACA
CAGTCTTCTTAGCGAGAGAAATGCAAAATCTAAGTATCgaattatcgaaa
aatttgttcctatcCGTAATCAAGACGTGGCCACTTTTACTGATCGCGTT
TCTAATGGCTGTCATTGCTGGTTGCATTGTATGGTTTTTGGTAAGTGTGA
CCATGAATTTGTAGAAATAGACTCACAAAGAAATATATTTATATCTAagt
tttttgacattaacaTTTCAAGCCAAGAGTGTGAGGCTAGCTTGTAGCAT
TAAGTGTATATATTAAATGATTGTAAAACAGTATGATAATCAAAATTGTG
TTAAGATCTTCAGGCTTAAGCCTAGATATGTTTTTTGAATCGGACTCATT
GTCTCATTCTTGCTTCTTTTCCCATTCTCAGGACATGTGGTTTAACAAAG
ACGAATTTCCATCACATTTCCCGAGAGGCCCTTTTGAAGGATTTTGGTGG
GCCTTTGTTTCCATGACTACCGTCGGGTGAGTCTACCAGTATTTAAAAGC
CAGAATTATATTTATTTAAGGTCAGAGGTTTATGCGCCGAAATGGTAGCT
TGttctttaaatttcaaaatggctgaaaacattTCGACTGTGAGGTCCTG
AATTTGATTGACATCATTATCgtcaaaaattaacaaagaggTGTACGAGT
TTGAGTCAAAGCTTTTCAAACGTTATATTACGACTAAAAATCCACAATAT
TCATTTGATAACTCTTCTTCCAGATACGGTGACCGTGCACCGAAATCGAT
CGTAGCACGTTTCTTTGCAGTGATTTGGATTTTGTTTGGTATCACGATAT
TCTCGATGTACACAGCCTCATTGACGACTGCACTCAGTAAATCTGTTGAT
GACCTTATCATACCTACAATGGCTGGCAAGAAGGTAAACTTTCGCGACTC
TTTTCAAGATGCAATTTTGTGGCTACAAAGTTTAATTGACCAAATCACAC
ACGAGTTGAACCACTTTTCATGATACTATAGATATTCTTTATTACATTTT
CCAGCTTTGAATGTCTGTTGTATCACATTTTTTCGTGCATTATTATACTT
TGTGGGCGTAGTGGTATAGCGGTAATCATCTTTGCCTTTGGTTCAGGAGG
TCAAACTCGAATCCCACTGTGAtactacggttcacttggcTAGTTGTAGA
ACTTCACCCGGGCCAACCCATACCAATTCTGAGGTAATATGTCGTGCACA
GTTGCGTGGTGACACTCCTCTTGTTCTACACGCGTGACGAGCACTATGCT
CTCCCAAGTAGTTCGAGTGTCTTCACTTTACAGGGCAGGTGACTAAGTGT
AATTGAAATCGAGAGGAATTCCTACCTTGTAAGTAGTAGGACCTGTTCCC
cgatgaggggggggggtagtatAAAATCACCATATTATTGTGTTTTAAGT
AGTGCATTAGTAACCCCTCtatcaatttttgtttcaaatactCTATAAGG
AGTACTCCGAATGACAAAGATTTCCTTCACTCATAGATTGGTGTGTTGGC
AACAACAGCTCTTGGCAAATcagccgccattatggaaggtGCTGACATCA
TCACATTTCCAACTATCGAACGGTTGATAGATGCTTTAAAACACGACGAT
GTTGAAGGTATGATGTTCTGATGTTCATCAAAAGGTTACCGAGACATACA
GTATTAGAGCTTTTGAGAATGACAGTGGTATAAGCAAGGGTTTGTCTGTg
atggaaaatggattttacacagcaaataaGCACTTATTGCTTAAGTTTTG
AATTGAATGATGCAAAATTTTATACTTCTCTTAGACGAAATTCCGTCAGA
GACATCTAACATTGATTTTCGGAATGATTCCTTTAAGTTCTAATATATac
taaccactgacctttatatatccctggaccaagctatatcttccatcttt
gatcgaagtttttttgaaattggtacccgagaagatgccattgcaatgtt
aaaaattaatgtcTAACGGCGccacatcatcaaaagtattcgaggaaaag
tagacctagcgctttcgatgcatttacactgctattgagtagtgccgcca
ttagggtaccacttttcaaaaaactacgatcaaaaattttgcttggccgg
gattgagaaacttggtccaggaaGGGTATATCAAGGTCAGTGATATCAAC
CCTTATAATAAATGGCCAAAAACGTAAAAGCAATAAACAACAATAGCTCT
GATCATAgaatgtgaaaaaattcttattttgcaGCCATCGCAATGGACGA
ATATTTAGCGGAATATATGTTAACGCATTTCGAAAGCCGCGTCTCTAAAA
TACGTAAACATCACGGCTTGCAAATTGACGGCAATTCCTACGGCGTCGTC
ACGGATGACGCCGGCATGAAAGAAATGTTGGACTCGTTTTTCCAAACAAA
CGAAGATAATCGAGAAACAATGATACATGAGATCATGAAAGAAAATTACG
TAAGTACTCGTTTTACGAGAGGTCAATCGAATTAAATCGAATTGAATCGA
ATCTATCGAATAACAGAAATTCGACTATTACAGTTATTTTGGACCAATTT
TCTTCTTAGAATACCTCCCTACCAAGATTCAATGTGTTAGTTTGAATTGA
AAATATTCTACAAATCAAAGAGAGTTAATTATGTATAGCATAACAAAACT
ATCATACCTTATTCTACCTTCAGATGAAATTCAGCAAACTTCAAAAGAAT
AAGATCGATTCTCAAAACATCCATAGTGCCGATTCCCCGTTGTTTCTCAT
CACCGTGGTAACGCTTGTATTGGTTGGCATAGCAACCATCGTCCTTGGTT
TCTTCTGCAAATGGTTTGTAAAACACCATCATCAACACGTTCCAGATTTC
ATCAAAAGTCGAATGGTTTACCGGAAGGAGATGTTCAACCCAGATATGGA
AGCTCTGAATAAAGTAGATTTAGATAACAATAGTAAGTACATTAATCGGT
CCTAATGCtagactgggttcgagttatgTTAAGAGTAATAAACTGTCAAT
ATTGCAGCATTCCTGGCTTAAATTCATGAGTACATTATGTGGCAGATTGT
CCCAGTTAgttctgtttttgtttcctaTTTTGGCGTTCTTGACTTTTAAC
GCGACTCAAGCCTTATCTACCCTTGCACAAAAAGCGGGTTTGTCCCGATG
TACTAATAGCTTCAGACTTCTATATAAAGCGGTGAATCTGTCAATAGTCG
CTTGACGTCAGGTTATCCTGTAACTTCAAACCCAAACCCTTACTTCAAAG
CACAAAGCATAAATTCATCAGATTAAGtcatttcaatttctttgtaaAAT
GACTGACTCATTCATCCTTCTTATATATATCTTTGAGTGCATTGATAGTG
AAATTTTGTACGCTTTTTGTTGTATCGATCAGGTGTCGGTGATTCTCAAC
ATATAAAGCATGAAGTATCTTTCTCTTAGGAAATGGGTTTTTAGCAATGG
TTCTACATTATAACTTTGCAGGTATCCTAACTATCAaggctttcaaaatt
ttcaagaaatttttcttatagAATATGAGCTTTTTGGAAACCAATACAGG
ataagattttaaaaagataaaaatcgattttctaAAACGTTTTTGGTTTT
GCTTCAGGTATCGAGACAACTACAGACTCCATCGAGATGGGGAAACTAGC
CAAAGATGTCAACgatctgaaaattcaattcgATAAATTACAAAAGCGTA
GATAA Coding sequence (CDS) from alignment at sc0000038_pilon:1188950..1193904+ >XLOC_035458 ID=XLOC_035458|Name=XLOC_035458|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3138bp|location=Sequence derived from alignment at sc0000038_pilon:1188950..1193904+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGGGAAGAATTTAGAAAACAAATATATCCACTCAATCATGAATTCTTT
AACAATCACACTCCAAATTATTTTCTTACTCCAAATTTTCACCGAAACAT
CCTCTTCGTCCTTCGAATGTACAAACCGATTCGAATATCGCCACATGTTG
AAATCAAAAGTTCCACAATGGGGAAATTGTACTTACATAGTGAATCATTT
TCCCATGTGTAAACCAGAGGTGGAAGTATGGTACCGCCATTTACCACCCT
ACGTAGACAAGCAGAACGAATCACAAGTACATGGGCTGATACCAGTCAGG
GAAGAATTTAGAAAACAAATATATCCACTCAATCATGAATTCTTTAACAA
TCACACTCCAAATTATTTTCTTACTCCAAATTTTCACCGAAACATCCTCT
TCGTCCTTCGAATGTACAAACCGATTCGAATATCGCCACATGTTGAAATC
AAAAGTTCCACAATGGGGAAATTGTACTTACATAGTGAATCATTTTCCCA
TGTGTAAACCAGAGGTGGAAGTATGGTACCGCCATTTACCACCCTACGTA
GACAAGCAGAACGAATCACAAGTACATGGGCTGATACCAGAGATGTTGCG
TCAGGTTTACGAAACATGTTGTATGGGTTGTACCAAAATCAACTTCAAGa
attctgatgacgtcatcgatatTTTGTTCAAACCAAATCTCACATTGGGA
ATGCCCTTTGAATCTGCACTAGAGATGTTGCGTCAGGTTTACGAAACATG
TTGTATGGGTTGTACCAAAATCAACTTCAAGaattctgatgacgtcatcg
atatTTTGTTCAAACCAAATCTCACATTGGGAATGCCCTTTGAATCTGCA
CTAGGTAGTAAGAAGATTTCTGGCAAACATTACGTCAACTTTCTTCAATC
ACACAACACAGTCTTCTTAGCGAGAGAAATGCAAAATCTAAGTATCgaat
tatcgaaaaatttgttcctatcCGTAATCAAGACGTGGCCACTTTTACTG
ATCGCGTTTCTAATGGCTGTCATTGCTGGTTGCATTGTATGGTTTTTGGT
AGTAAGAAGATTTCTGGCAAACATTACGTCAACTTTCTTCAATCACACAA
CACAGTCTTCTTAGCGAGAGAAATGCAAAATCTAAGTATCgaattatcga
aaaatttgttcctatcCGTAATCAAGACGTGGCCACTTTTACTGATCGCG
TTTCTAATGGCTGTCATTGCTGGTTGCATTGTATGGTTTTTGGACATGTG
GTTTAACAAAGACGAATTTCCATCACATTTCCCGAGAGGCCCTTTTGAAG
GATTTTGGTGGGCCTTTGTTTCCATGACTACCGTCGGGACATGTGGTTTA
ACAAAGACGAATTTCCATCACATTTCCCGAGAGGCCCTTTTGAAGGATTT
TGGTGGGCCTTTGTTTCCATGACTACCGTCGGATACGGTGACCGTGCACC
GAAATCGATCGTAGCACGTTTCTTTGCAGTGATTTGGATTTTGTTTGGTA
TCACGATATTCTCGATGTACACAGCCTCATTGACGACTGCACTCAGTAAA
TCTGTTGATGACCTTATCATACCTACAATGGCTGGCAAGAAGATACGGTG
ACCGTGCACCGAAATCGATCGTAGCACGTTTCTTTGCAGTGATTTGGATT
TTGTTTGGTATCACGATATTCTCGATGTACACAGCCTCATTGACGACTGC
ACTCAGTAAATCTGTTGATGACCTTATCATACCTACAATGGCTGGCAAGA
AGATTGGTGTGTTGGCAACAACAGCTCTTGGCAAATcagccgccattatg
gaaggtGCTGACATCATCACATTTCCAACTATCGAACGGTTGATAGATGC
TTTAAAACACGACGATGTTGAAGATTGGTGTGTTGGCAACAACAGCTCTT
GGCAAATcagccgccattatggaaggtGCTGACATCATCACATTTCCAAC
TATCGAACGGTTGATAGATGCTTTAAAACACGACGATGTTGAAGCCATCG
CAATGGACGAATATTTAGCGGAATATATGTTAACGCATTTCGAAAGCCGC
GTCTCTAAAATACGTAAACATCACGGCTTGCAAATTGACGGCAATTCCTA
CGGCGTCGTCACGGATGACGCCGGCATGAAAGAAATGTTGGACTCGTTTT
TCCAAACAAACGAAGATAATCGAGAAACAATGATACATGAGATCATGAAA
GAAAATTACCCATCGCAATGGACGAATATTTAGCGGAATATATGTTAACG
CATTTCGAAAGCCGCGTCTCTAAAATACGTAAACATCACGGCTTGCAAAT
TGACGGCAATTCCTACGGCGTCGTCACGGATGACGCCGGCATGAAAGAAA
TGTTGGACTCGTTTTTCCAAACAAACGAAGATAATCGAGAAACAATGATA
CATGAGATCATGAAAGAAAATTACATGAAATTCAGCAAACTTCAAAAGAA
TAAGATCGATTCTCAAAACATCCATAGTGCCGATTCCCCGTTGTTTCTCA
TCACCGTGGTAACGCTTGTATTGGTTGGCATAGCAACCATCGTCCTTGGT
TTCTTCTGCAAATGGTTTGTAAAACACCATCATCAACACGTTCCAGATTT
CATCAAAAGTCGAATGGTTTACCGGAAGGAGATGTTCAACCCAGATATGG
AAGCTCTGAATAAAGTAGATTTAGATAACAATAATGAAATTCAGCAAACT
TCAAAAGAATAAGATCGATTCTCAAAACATCCATAGTGCCGATTCCCCGT
TGTTTCTCATCACCGTGGTAACGCTTGTATTGGTTGGCATAGCAACCATC
GTCCTTGGTTTCTTCTGCAAATGGTTTGTAAAACACCATCATCAACACGT
TCCAGATTTCATCAAAAGTCGAATGGTTTACCGGAAGGAGATGTTCAACC
CAGATATGGAAGCTCTGAATAAAGTAGATTTAGATAACAATAGTATCGAG
ACAACTACAGACTCCATCGAGATGGGGAAACTAGCCAAAGATGTCAACga
tctgaaaattcaattcgATAAATTACAAAAGCGTAGATAAGTATCGAGAC
AACTACAGACTCCATCGAGATGGGGAAACTAGCCAAAGATGTCAACgatc
tgaaaattcaattcgATAAATTACAAAAGCGTAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1188950..1193904 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1474-1569:4860 |
| Aaloc | 1213-1470:3924 |
| Aaloc | 1000-1212:3487 |
| Aaloc | 877-996:2737 |
| Aaloc | 718-876:1975 |
| Aaloc | 622-714:1632 |
| Aaloc | 430-621:1199 |
| Aaloc | 298-426:619 |
| Aaloc | 1-294:1 |
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