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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:3374460..3378475+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035455 ID=XLOC_035455|Name=XLOC_035455|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4016bp|location=Sequence derived from alignment at sc0000006_pilon:3374460..3378475+ (Clytia hemisphaerica_ch_hm2_pilon)
atcaaaaagctgattaCGTCGAGTGAAGATACTCCAATATGGCTAGAGGA
TCAGGATGATTTCTCGGTTTTCCAAGACGTCAACATGACAGTTTTCAACC
AGGTTAGTTTTCTGTTAACCGGTGTGTCTATTGACGACAACTGCCCCAAC
CAGTTTAGCTCAGGCTTTACTCAAAAATACTTCTAACCAGcactaaaata
taaaaaaaacatttcataatGCTACAGGTAAGGCTGGAATGTTAGTTTGT
CGTCATAGATATTTGAGGTGGGTGGGTGGGTcggaaataaaattattttg
gtcATTCTAAACATAAGTGAATACTGATAAAGCTATAAATGATTAAGTGA
ATAAATTAGTAAAATAAACGAGCCTTTAAATTGCTAAACCCAAGATTCAT
TcaatttgtgaagaaaaatcttttttttttgagatagCTAGCAATACACT
TTTTTGAGTCGGCAAGTTTCGTGgaagggtcggtcgggtgacggcaaacc
aacaactttttaagtccagcctaacGTAGACCAGAATGAGTCTGCAGGCT
AAAAACCAGAAGCTTTTTTAATCATTATTCCTTTTAAAGTAAACCAAGCA
AGATATATTGGCATACCTTATTTTTTCTGTcattccaaaacttttttttt
ttgatggaaCTGAAAAGTTTTACAAGTGGGGGGCTTCCGAGGGTACAAAA
TACGGGAATACCGgtaattttttcatgaaataccGACGTACCggtcaaaa
aattctaaaataccGGCCAAAATGTCCCAACGAGTACCGGAATACAGGAA
ATTGGGCCTTTCGATACCGGAATATCGGTCATTTTTCGTCCAATACCGGA
ATACCGGTCAATACCGGATTCTCGGAAGcccccccTTACAAAGGACATGA
CAAGAAATGGTGAAATAGAGAAGTCAACTGTCATTTACAAACATAAATTC
TCACCAGTGTCAAAAttcatatcctaccaaaataaATTGTTGCCATTCTC
TCCAAAATAAGCATCGCTGTCATACTTTGCATTACTCTATTTTAATAGAG
TCAACTAGTGCATCttctaaattttgtttttctctatTCAGACTAGTAGA
GAGACCGGAAAAGACCATTTCGACCCGCCCAATGCGATGCCAATTATAAC
GACCAACGGGTTTTGGCATAAGGCCGGCAAGGATTTTAATCTTCAAAGGT
ATTTTTAATTCACACgcttattttatttgaaagaaaaaaactcaaCCCTT
CGTTCGTTTAGGGGGCCCCTTTAACGAAATtgtttgataacttttgatag
acttAATATATCGCcataacatttttcaaattttgcatctAAATTCACCT
AAAAAATATGTAAAGGCAAGGGATCGAtttttttGCCACCTGCTAGGTTC
GTGTATTTGACAGACGAGTCTAAAAATAGCTTTTTTGATAGTGTGGTGGC
TGAtgatgaaaaaatgtttgaagccaAAAATCTTTCACTTATGCTTAGGG
GGTCTCCAGCAGGTGGCAAACGCAaaattccgccattatggaaaagTGAC
CATGAGCCAAAAATGCTCACCTATTTATTTTACCCCTACTATCAATCCCA
GGTATGAAAATAACTATGTATAAAAAGTATTCTTCCCTTCGTTTATTCCC
CTTTGAATCAAGGGGACAAGAGCTATGACCAAAAGTTTTAGAGTTGGTAT
TTCGGCCCATTTTGGGCCCATATACGCGTCCATCGGAGCTAAAGGCTTAA
TTTCGCCCCTGATGAGTTTATGCGCCAAATTTGAGCCGAATCCAAGCACT
CAGAATAAcacttttaaaatataattcgGATATACGgaaaatatttgatt
tgagaccACAAACCCTTCTCCATaaaaaaaCTTACCACAACTTTTACGTG
GACTATTTTCTCTCTCATCATGTCTACACTTATaattttgacaacaaaaa
attaatttgagcattttttaaaaaatgcaagTATAACCCACTCCTACTAA
TAAAGGCCAAAACGATCACCAAAAAGGAATATAAACATTCCAACTATTtg
ctcctgaaaatttcatcttcACACTTACTGATTGTAAATTCTTTGCGTAT
TAGGGTACTGGGAAGAACAGTTGTGTTATATTTTGAGAAAGATGATGACG
ACGAGGATGATACCGAGAGCGAAGACAACGAAGAAGACATTGCTGAGTTG
CATCggtttgagaaaaaacttaAACAGCTaaaaaaaaaaGCGAATAATTC
ATTTGTGTTTATCAATTGTCTAAGATGGGAGATGGAAAACTTCGAAGACA
AACCTTTGCATCTACAAATAGTGCAACCAGCCATGAAGCCGTTGCAAAGG
ATTTTAGACAGACGTTCATTGAAGAATTACAGCTTGTTGATAAATGCAAC
TGGGAAAGtaagtttgatattttgatatCATATTTTCTAAGCAAGAATAA
TTCACTCGAAAGAAAGCTTTTTAAATCTTGGTACAAAcccaaaaacaatg
gaaaacgTGGGGAATAATCAGCAGAAGTGACAAATTTTAGcctaaaaagc
attttttccaCGATTAGATAttaaaacttattctttatttCAAATCGTTG
TTCTTTTATAATagacacgcttttttataacaatTAGTACATTTTGGCTG
GGGCTCAgtcattcttaatttttcgaaattttcaggcTTGATATTTTTTA
GCTGTTCTTAAAATCTAGAATTTATTGTGCATTACTTTGTAACCCTCGTT
TCAAATTCTAAACTTCCATTTTTTAAGAGAAATAAACCCTGAAAAGCAAG
GCTCAgcttgtttttaaattgttcttagattttgaccaaatttcaggctc
acgttcttataaaattgtccttataaaaaacgtgtatgtacaatgtaatt
taaaaaaatatatttttcaagataTAAACACGTTTCTATTAACAGATTCT
CGAGAAATGTGGACGCAGTGAGCAGCAAATCAAAGACTTTGCGAATGGTT
ATGTGGCAACTGTGGAGTCCTTCTATAAGAACTTAGACGCATTTATGGCT
CCAAAATCTGCTAACACAAATACGGGTTCCAGAAAACCAGTTATCAGCAA
ACCAAATTTGCTCCACATTTTCGACTATATAAGGAGTGCAGTTCATATGG
AAGTGGTAGGTAACTTTTCAAAGCTCAAAATACATTTATCTGTGATAAAC
AAAAGgataaaactaCTACTTTTATTAGGATTAAATATCGCGGGGATTGA
ATTTCACGCGGAGTTGGGTGTCATCCgtgagtatttttgaaaaaatccaa
aaatagtGAAATTCTACAATCAAAACATTAACTGGCATAAAAAGGGATAA
ATGTGTATTTCAGCTACCAACTAAAAAACAACGCAAAAGTTTTATCTCTA
TGTGACAACGGCAAAATTAAACTTTGAGGCTTCATAGGGCTCTTGATTTT
ACAGCGAATTTATGGAATCCCAGTACTATGCTGCGCAAAACTATTTCGAT
AAAGGAATATTCCAGGATTTCTAATTTATAGCCCTTACGGATGAGTGCag
ttcaaaaatatcaatatattTCATAGACGTGTAAAGAAATCTTTTTAGCA
AACTTATAATAATTGTCTTGTCTAATTGTAGAGTGTGTAATCACTCTTAC
CAAGTATTTCAAACTTCGCTGATATGTATATTTTAGGACGAAATGTGTAT
CAAAAAAGCCAAATCACGATGTGACTGTGGGAATCAGATTTCTTTCGCTT
TCAAAAACATCATGAAAGCTATTGACCATCGACAATTGACACCTACCGAA
ATCAAATTGATGAAGGCACAGATTTCTACTGCAAATCTTGGGTGTGTGTC
GCATAACGTGAAACATACAATCGGCCAAAAGCAATATGCTGGCGTGCACA
TCAGTGTTCAGAAGCTTCCTGAGGATTTGAGGgcttatttttcaaaaggt
tcGATTTTACCTATAAAGCGTTTGTTTGTTAAATTGATTTCtaatatgtt
tcattttttctgcTGA Coding sequence (CDS) from alignment at sc0000006_pilon:3374460..3378475+ >XLOC_035455 ID=XLOC_035455|Name=XLOC_035455|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2106bp|location=Sequence derived from alignment at sc0000006_pilon:3374460..3378475+ (Clytia hemisphaerica_ch_hm2_pilon)
atcaaaaagctgattaCGTCGAGTGAAGATACTCCAATATGGCTAGAGGA
TCAGGATGATTTCTCGGTTTTCCAAGACGTCAACATGACAGTTTTCAACC
AGatcaaaaagctgattaCGTCGAGTGAAGATACTCCAATATGGCTAGAG
GATCAGGATGATTTCTCGGTTTTCCAAGACGTCAACATGACAGTTTTCAA
CCAGACTAGTAGAGAGACCGGAAAAGACCATTTCGACCCGCCCAATGCGA
TGCCAATTATAACGACCAACGGGTTTTGGCATAAGGCCGGCAAGGATTTT
AATCTTCAAAGACTAGTAGAGAGACCGGAAAAGACCATTTCGACCCGCCC
AATGCGATGCCAATTATAACGACCAACGGGTTTTGGCATAAGGCCGGCAA
GGATTTTAATCTTCAAAGGGTACTGGGAAGAACAGTTGTGTTATATTTTG
AGAAAGATGATGACGACGAGGATGATACCGAGAGCGAAGACAACGAAGAA
GACATTGCTGAGTTGCATCggtttgagaaaaaacttaAACAGCTaaaaaa
aaaaGCGAATAATTCATTTGTGTTTATCAATTGTCTAAGATGGGAGATGG
AAAACTTCGAAGACAAACCTTTGCATCTACAAATAGTGCAACCAGCCATG
AAGCCGTTGCAAAGGATTTTAGACAGACGTTCATTGAAGAATTACAGCTT
GTTGATAAATGCAACTGGGAAAGGTACTGGGAAGAACAGTTGTGTTATAT
TTTGAGAAAGATGATGACGACGAGGATGATACCGAGAGCGAAGACAACGA
AGAAGACATTGCTGAGTTGCATCggtttgagaaaaaacttaAACAGCTaa
aaaaaaaaGCGAATAATTCATTTGTGTTTATCAATTGTCTAAGATGGGAG
ATGGAAAACTTCGAAGACAAACCTTTGCATCTACAAATAGTGCAACCAGC
CATGAAGCCGTTGCAAAGGATTTTAGACAGACGTTCATTGAAGAATTACA
GCTTGTTGATAAATGCAACTGGGAAAATTCTCGAGAAATGTGGACGCAGT
GAGCAGCAAATCAAAGACTTTGCGAATGGTTATGTGGCAACTGTGGAGTC
CTTCTATAAGAACTTAGACGCATTTATGGCTCCAAAATCTGCTAACACAA
ATACGGGTTCCAGAAAACCAGTTATCAGCAAACCAAATTTGCTCCACATT
TTCGACTATATAAGGAGTGCAGTTCATATGGAAGTGATTCTCGAGAAATG
TGGACGCAGTGAGCAGCAAATCAAAGACTTTGCGAATGGTTATGTGGCAA
CTGTGGAGTCCTTCTATAAGAACTTAGACGCATTTATGGCTCCAAAATCT
GCTAACACAAATACGGGTTCCAGAAAACCAGTTATCAGCAAACCAAATTT
GCTCCACATTTTCGACTATATAAGGAGTGCAGTTCATATGGAAGTGGACG
AAATGTGTATCAAAAAAGCCAAATCACGATGTGACTGTGGGAATCAGATT
TCTTTCGCTTTCAAAAACATCATGAAAGCTATTGACCATCGACAATTGAC
ACCTACCGAAATCAAATTGATGAAGGCACAGATTTCTACTGCAAATCTTG
GGTGTGTGTCGCATAACGTGAAACATACAATCGGCCAAAAGCAATATGCT
GGCGTGCACATCAGTGTTCAGAAGCTTCCTGAGGATTTGAGGgcttattt
ttcaaaaggttcGATTTTACCTATAAAGCGTTTGTTTGTTAAATTGATTT
CtaatatgtttcattttttctgcTGAGACGAAATGTGTATCAAAAAAGCC
AAATCACGATGTGACTGTGGGAATCAGATTTCTTTCGCTTTCAAAAACAT
CATGAAAGCTATTGACCATCGACAATTGACACCTACCGAAATCAAATTGA
TGAAGGCACAGATTTCTACTGCAAATCTTGGGTGTGTGTCGCATAACGTG
AAACATACAATCGGCCAAAAGCAATATGCTGGCGTGCACATCAGTGTTCA
GAAGCTTCCTGAGGATTTGAGGgcttatttttcaaaaggttcGATTTTAC
CTATAAAGCGTTTGTTTGTTAAATTGATTTCtaatatgtttcattttttc
tgcTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:3374460..3378475 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-1053:3687 |
| Aaloc | 514-723:2946 |
| Aaloc | 211-513:2105 |
| Aaloc | 103-207:1092 |
| Aaloc | 1-102:1 |
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