XLOC_035404 (mRNA) -

Overview
NameXLOC_035404
Unique NameXLOC_035404
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000140_pilon:736250..737101-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035404 ID=XLOC_035404|Name=XLOC_035404|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=852bp|location=Sequence derived from alignment at sc0000140_pilon:736250..737101- (Clytia hemisphaerica_ch_hm2_pilon)
GTCGATATGATAAGCGAGTTGAACATCGAAAACATTCTTGGTTCTCTTAA AATATGGAATCCATCATACGATGAGGATGAAAAGTATCTCATTTCTTTGG TATCAGGTGAGGAATACGAAACAGTTATCACGATCGATGATGATGATCTT AACACACCATATTTCAAATACGAACAAGGAAAATTTACTTTGATGAATCA TCCTCCTTCTTTATTGAACAAAATACCAGAAGATTTGTTACAGAAGTCAA CTTCGTTTGATGTTACAATTCGGATAAGAATCGATGTCGGTAATATTGAT GGAGTGAAATTATTCTTTCAACGCTTGTCATCATACAACACACCAATCAC ATTGTCAAATATTGTAATAAATAGTCCGTACGCCAGAATTATCATCGATA TGATAAACGAGTTGAACATCGAAAACATTGGTTCTCTTGCAGTACGGAAT CCATCATATGATGAGGATGAAAAGCATCTCATTTCTTTGGTATCAGGTGA GGAATACGAGACAGAGATCATGATCGAAAAGAATATAACGAATCGAATTC CACCTTACTTCAAATACGAACAAGGAAAACTTACTATAAACAAACCTCCT TCTTTATTGAAGGAAATCCCAGAAGATTTGTTACAAAAGTCAACTTCGTT TCATGTTGAAATTCTGAACAAACTTGTTGAAGAGACAAACGTAATAAACT TTTTACGCCATTTGACGTCATTCAACAAACCAATTACTATACGGGTGGTG GAGAAGAGGATACCATTTCTTAGATCTTCTTATGTTGCGGAAGGTGAAAT TCGACCGTTGTTGGAGAAACACAACATTGATACAAGTAGTATTGAAATAA AA

Coding sequence (CDS) from alignment at sc0000140_pilon:736250..737101-

>XLOC_035404 ID=XLOC_035404|Name=XLOC_035404|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000140_pilon:736250..737101- (Clytia hemisphaerica_ch_hm2_pilon)
GTCGATATGATAAGCGAGTTGAACATCGAAAACATTCTTGGTTCTCTTAA
AATATGGAATCCATCATACGATGAGGATGAAAAGTATCTCATTTCTTTGG
TATCAGGTGAGGAATACGAAACAGTTATCACGATCGATGATGATGATCTT
AACACACCATATTTCAAATACGAACAAGGAAAATTTACTTTGATGAATCA
TCCTCCTTCTTTATTGAACAAAATACCAGAAGATTTGTTACAGAAGTCAA
CTTCGTTTGATGTTACAATTCGGATAAGAATCGATGTCGGTAATATTGAT
GGAGTGAAATTATTCTTTCAACGCTTGTCATCATACAACACACCAATCAC
ATTGTCAAATATTGTAATAAATAGTCCGTACGCCAGAATTATCATCGATA
TGATAAACGAGTTGAACATCGAAAACATTGGTTCTCTTGCAGTACGGAAT
CCATCATATGATGAGGATGAAAAGCATCTCATTTCTTTGGTATCAGGTGA
GGAATACGAGACAGAGATCATGATCGAAAAGAATATAACGAATCGAATTC
CACCTTACTTCAAATACGAACAAGGAAAACTTACTATAAACAAACCTCCT
TCTTTATTGAAGGAAATCCCAGAAGATTTGTTACAAAAGTCAACTTCGTT
TCATGTTGAAATTCTGAACAAACTTGTTGAAGAGACAAACGTAATAAACT
TTTTACGCCATTTGACGTCATTCAACAAACCAATTACTATACGGGTGGTG
GAGAAGAGGATACCATTTCTTAGATCTTCTTATGTTGCGGAAGGTGAAAT
TCGACCGTTGTTGGAGAAACACAACATTGATACAAGTAGTATTGAAATAA
AAGTCGATATGATAAGCGAGTTGAACATCGAAAACATTCTTGGTTCTCTT
AAAATATGGAATCCATCATACGATGAGGATGAAAAGTATCTCATTTCTTT
GGTATCAGGTGAGGAATACGAAACAGTTATCACGATCGATGATGATGATC
TTAACACACCATATTTCAAATACGAACAAGGAAAATTTACTTTGATGAAT
CATCCTCCTTCTTTATTGAACAAAATACCAGAAGATTTGTTACAGAAGTC
AACTTCGTTTGATGTTACAATTCGGATAAGAATCGATGTCGGTAATATTG
ATGGAGTGAAATTATTCTTTCAACGCTTGTCATCATACAACACACCAATC
ACATTGTCAAATATTGTAATAAATAGTCCGTACGCCAGAATTATCATCGA
TATGATAAACGAGTTGAACATCGAAAACATTGGTTCTCTTGCAGTACGGA
ATCCATCATATGATGAGGATGAAAAGCATCTCATTTCTTTGGTATCAGGT
GAGGAATACGAGACAGAGATCATGATCGAAAAGAATATAACGAATCGAAT
TCCACCTTACTTCAAATACGAACAAGGAAAACTTACTATAAACAAACCTC
CTTCTTTATTGAAGGAAATCCCAGAAGATTTGTTACAAAAGTCAACTTCG
TTTCATGTTGAAATTCTGAACAAACTTGTTGAAGAGACAAACGTAATAAA
CTTTTTACGCCATTTGACGTCATTCAACAAACCAATTACTATACGGGTGG
TGGAGAAGAGGATACCATTTCTTAGATCTTCTTATGTTGCGGAAGGTGAA
ATTCGACCGTTGTTGGAGAAACACAACATTGATACAAGTAGTATTGAAAT
AAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035404XLOC_035404-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000140_pilongenomesc0000140_pilon:736250..737101 -
Properties
Property NameValue
Aaloc748-843:97
Aaloc523-741:316
Aaloc184-522:664
Aaloc37-183:814
Aaloc1-36:853