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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000013_pilon:2658817..2661743+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035363 ID=XLOC_035363|Name=XLOC_035363|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2927bp|location=Sequence derived from alignment at sc0000013_pilon:2658817..2661743+ (Clytia hemisphaerica_ch_hm2_pilon)
atgTTTGCTTTCCGAAGAGCGCAGAATTTTCGTCGACTGTCTTCATCAAA
TAACGAAGAACTTTCAATGGAAATGATAGATAGGGATGAAAGTCAATCTT
CGAAAGAAAACGATCCTTTTATACAGGACATTGAGGAAacagatgttttg
aaaaaagccAATGGGACAAGTAATGATGAATCTACTCAGAACTTTCCAAG
TGTTTTAAAAAGAGAGAACAAACCACCTTTACTTCGATTCGCAGCGTCTG
TAAAGAAAGTTCGAGAAAATACTGGACAAGTGGTTGAAAATACTGAGGTG
GATGACGAACTTTTAAGCCCCAGCCAACGGACTCTAAAGAAACCGAAAAC
ACCAACGACACCAATGAAAGACGCGGCTACAAACGTAAAGAATGTAAAAA
GTGCTGTCACGTTCATGCAAAAAGCTAGCCTACGCTCGAGCTTGAAAAAG
AAACTTCGTAAGATAGCAGAAGAGAGGCTAACTATACGGCAAATCTTTCG
TCGCTACGTGGATCAATCAACATTGCACGGATTCAGATATATAGTCTCTG
ATTCGTACTATGTTCGACGCTTCCTATGGGCTTGCCTCATGATTTTAGGC
GCTGTTTATTTTATCATAAAACTCAAACAAGgtattattgaatatttctc
cTATCCATTTAGTACTCTATCTACAATGGAGTACGTCAAAGAATCGCTAC
CACTGCCTGCTATTACTTTCTGTAGTGTAAACCAGTTCAAATTAAGCCGA
TTGGAAGAGAGTCCTTTAATGTACAGACTATATAAAGAGAATCGGTTGCC
ACTACCCCGTAATTGGAGTGACCCGGGTTTCGACATATCCGGTGAAGAGT
TACACGAGCAATTGAAAAACGTATCATTGaacattgatgatatttttaag
CACTGTGATTGGATAAAACGTGACACGGCGCACCCTCTTGTTCCACCACG
TGTATGCCACTCCGGTAATTTTACttcccatttttcaaaaagtggacAAA
TCTGTTTCACATTGAATTCTGGCAAAGATAACCATACAAAACTTGAAGTC
AACCATTTTGGTATAAATGATGGTTATGAGGCTATGTTTGATTTCAATAA
CCAAGATGTCATCCCGTTTGAAGATTATACTGGTATACATGTGATCATTC
ATGATCCTAATGAATTACCTACTGATAAAGTCGGATTTCTCATCTCACCT
GGTTTCAAAGTTTACGTTAATTTGAAACGTGTCGAGGTAACAAACTTTGA
ATGCGACTTTTAACCCtatatttcctttttaaatttcttacTTTATTAGA
TCTCTTTCCTTGTGATTTAATCCGTCAAACGGGTGTTATcagacatccct
gtctcatcgTTTTGTCTAGCGCCAAGAGTCCCTTGCTTTTGATTTGTAGG
AATTTAAATTTCTGTTACAcgtttttgtataagaaaaaactaatataaga
acataaggcttcaatggccataatgctaagaacaagttaagaacatttca
aggctttgggGATACttaaaaacacccgatttcttaggaaaatgggcaaa
atacccataaaatgggggaaaataagaacatgttaagaacatttttaggc
ttaaaactcaaaaagttaagaacatccgaaagcttcaaaaattttgcatg
ctctcataaaaaacgtgtatttacaataaaataatgaaatgatGGTACTT
ATCATAGCTGGTAGACTTTGAAAATGATCAAACTCGGaaaaaaaTTAATC
ACTTTCCTTGTAGGTCAACAATCTTGAGCCACCCTACAGTACAAAATGTG
GTGAAAAGCAGCTGAAATATTATGAGACATATTCACAAAGTGCGTGTCTG
ATGGAAAAATTGACAGACTTTGTTGGTGAGAAGTGTGGGTGCAGAGAGCT
GTATATGCCAGGTATATgagttttttgtctttttattacTTAGTCGTTTC
ACGTGGTCCAAATCATGAAAGTTCTCTACGGGATAGTCATGATTGTACTT
TTAGTAACAACTATGATGCAAAATTGTCGGGAAATACTCTTTTTGTCAGG
GAAACTAGACTGTTACAAATAGTTCTTTAATGACATGAAAGGAAGAAAAG
CAGAAAACACAAGGGAAATCTTTCTTCATATTGTTTTTGATAGCATTTAG
TCGATATATAgttatgatttctttttcagacaACAACCTTCCATATTGTT
CACTGCGAGAAACATTTTCATGTGCTTATCCTATGAAAGGTGAGTTGACT
GTTCTAATGCGAAAAAGAACTTTGTAAGGTTTCTGTTGAACGTTTCCCGA
ATAAaattggctgaactttgctttttgataatttttatgacgctgagtcc
agtgaagtagactaggagcatttggcgagttcgccattttggaaaaaaat
atttgaaatccaaataacaaaaaagctactcgaagttgaaaaatataatt
aagcatgagaaacaaacatcaataacagatttttcaaataaaaacattgc
tttttctttttttacctggcaaaaacgaagaaaatcaaaaaaagcatatt
accatatactaccgggccacttcatcgcgccatccagtctataaaaaagc
tttaagtggaccccgggctagttGTCGAGGAGATCAGAACACTAGAGCGT
TCACTGATTTTTGGAAACCCTAGTGACATAGAGATTTTTTATCTAACTAG
ATTCCAGTTAGGTATAGATACAAATAACTTTATCAACCAGGAAAtgcttt
gaatttttctatctTGACAACAAACCCCCTGAGCTTTGGCCTTTTACAGG
TTTTTCACAGCGACATCGACATATACATAAGATCCGTTTATGTTTAGAAT
CTTTTAACCAATACGAAGCAAGGTTGGAATGTCCAATCGATTGCCAAGTG
GTTGAATATCAGACCACCATTACTGAT Coding sequence (CDS) from alignment at sc0000013_pilon:2658817..2661743+ >XLOC_035363 ID=XLOC_035363|Name=XLOC_035363|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3048bp|location=Sequence derived from alignment at sc0000013_pilon:2658817..2661743+ (Clytia hemisphaerica_ch_hm2_pilon)
atgTTTGCTTTCCGAAGAGCGCAGAATTTTCGTCGACTGTCTTCATCAAA
TAACGAAGAACTTTCAATGGAAATGATAGATAGGGATGAAAGTCAATCTT
CGAAAGAAAACGATCCTTTTATACAGGACATTGAGGAAacagatgttttg
aaaaaagccAATGGGACAAGTAATGATGAATCTACTCAGAACTTTCCAAG
TGTTTTAAAAAGAGAGAACAAACCACCTTTACTTCGATTCGCAGCGTCTG
TAAAGAAAGTTCGAGAAAATACTGGACAAGTGGTTGAAAATACTGAGGTG
GATGACGAACTTTTAAGCCCCAGCCAACGGACTCTAAAGAAACCGAAAAC
ACCAACGACACCAATGAAAGACGCGGCTACAAACGTAAAGAATGTAAAAA
GTGCTGTCACGTTCATGCAAAAAGCTAGCCTACGCTCGAGCTTGAAAAAG
AAACTTCGTAAGATAGCAGAAGAGAGGCTAACTATACGGCAAATCTTTCG
TCGCTACGTGGATCAATCAACATTGCACGGATTCAGATATATAGTCTCTG
ATTCGTACTATGTTCGACGCTTCCTATGGGCTTGCCTCATGATTTTAGGC
GCTGTTTATTTTATCATAAAACTCAAACAAGgtattattgaatatttctc
cTATCCATTTAGTACTCTATCTACAATGGAGTACGTCAAAGAATCGCTAC
CACTGCCTGCTATTACTTTCTGTAGTGTAAACCAGTTCAAATTAAGCCGA
TTGGAAGAGAGTCCTTTAATGTACAGACTATATAAAGAGAATCGGTTGCC
ACTACCCCGTAATTGGAGTGACCCGGGTTTCGACATATCCGGTGAAGAGT
TACACGAGCAATTGAAAAACGTATCATTGaacattgatgatatttttaag
CACTGTGATTGGATAAAACGTGACACGGCGCACCCTCTTGTTCCACCACG
TGTATGCCACTCCGGTAATTTTACttcccatttttcaaaaagtggacAAA
TCTGTTTCACATTGAATTCTGGCAAAGATAACCATACAAAACTTGAAGTC
AACCATTTTGGTATAAATGATGGTTATGAGGCTATGTTTGATTTCAATAA
CCAAGATGTCATCCCGTTTGAAGATTATACTGGTATACATGTGATCATTC
ATGATCCTAATGAATTACCTACTGATAAAGTCGGATTTCTCATCTCACCT
GGTTTCAAAGTTTACGTTAATTTGAAACGTGTCGAGatgTTTGCTTTCCG
AAGAGCGCAGAATTTTCGTCGACTGTCTTCATCAAATAACGAAGAACTTT
CAATGGAAATGATAGATAGGGATGAAAGTCAATCTTCGAAAGAAAACGAT
CCTTTTATACAGGACATTGAGGAAacagatgttttgaaaaaagccAATGG
GACAAGTAATGATGAATCTACTCAGAACTTTCCAAGTGTTTTAAAAAGAG
AGAACAAACCACCTTTACTTCGATTCGCAGCGTCTGTAAAGAAAGTTCGA
GAAAATACTGGACAAGTGGTTGAAAATACTGAGGTGGATGACGAACTTTT
AAGCCCCAGCCAACGGACTCTAAAGAAACCGAAAACACCAACGACACCAA
TGAAAGACGCGGCTACAAACGTAAAGAATGTAAAAAGTGCTGTCACGTTC
ATGCAAAAAGCTAGCCTACGCTCGAGCTTGAAAAAGAAACTTCGTAAGAT
AGCAGAAGAGAGGCTAACTATACGGCAAATCTTTCGTCGCTACGTGGATC
AATCAACATTGCACGGATTCAGATATATAGTCTCTGATTCGTACTATGTT
CGACGCTTCCTATGGGCTTGCCTCATGATTTTAGGCGCTGTTTATTTTAT
CATAAAACTCAAACAAGgtattattgaatatttctccTATCCATTTAGTA
CTCTATCTACAATGGAGTACGTCAAAGAATCGCTACCACTGCCTGCTATT
ACTTTCTGTAGTGTAAACCAGTTCAAATTAAGCCGATTGGAAGAGAGTCC
TTTAATGTACAGACTATATAAAGAGAATCGGTTGCCACTACCCCGTAATT
GGAGTGACCCGGGTTTCGACATATCCGGTGAAGAGTTACACGAGCAATTG
AAAAACGTATCATTGaacattgatgatatttttaagCACTGTGATTGGAT
AAAACGTGACACGGCGCACCCTCTTGTTCCACCACGTGTATGCCACTCCG
GTAATTTTACttcccatttttcaaaaagtggacAAATCTGTTTCACATTG
AATTCTGGCAAAGATAACCATACAAAACTTGAAGTCAACCATTTTGGTAT
AAATGATGGTTATGAGGCTATGTTTGATTTCAATAACCAAGATGTCATCC
CGTTTGAAGATTATACTGGTATACATGTGATCATTCATGATCCTAATGAA
TTACCTACTGATAAAGTCGGATTTCTCATCTCACCTGGTTTCAAAGTTTA
CGTTAATTTGAAACGTGTCGAGGTCAACAATCTTGAGCCACCCTACAGTA
CAAAATGTGGTGAAAAGCAGCTGAAATATTATGAGACATATTCACAAAGT
GCGTGTCTGATGGAAAAATTGACAGACTTTGTTGGTGAGAAGTGTGGGTG
CAGAGAGCTGTATATGCCAGGTCAACAATCTTGAGCCACCCTACAGTACA
AAATGTGGTGAAAAGCAGCTGAAATATTATGAGACATATTCACAAAGTGC
GTGTCTGATGGAAAAATTGACAGACTTTGTTGGTGAGAAGTGTGGGTGCA
GAGAGCTGTATATGCCAGacaACAACCTTCCATATTGTTCACTGCGAGAA
ACATTTTCATGTGCTTATCCTATGAAAGacaACAACCTTCCATATTGTTC
ACTGCGAGAAACATTTTCATGTGCTTATCCTATGAAAGAATCTTTTAACC
AATACGAAGCAAGGTTGGAATGTCCAATCGATTGCCAAGTGGTTGAATAT
CAGACCACCATTACTGATAATCTTTTAACCAATACGAAGCAAGGTTGGAA
TGTCCAATCGATTGCCAAGTGGTTGAATATCAGACCACCATTACTGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000013_pilon | genome | sc0000013_pilon:2658817..2661743 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1447-1524:2850 |
| Aaloc | 1387-1443:2182 |
| Aaloc | 1237-1383:1764 |
| Aaloc | 1-1236:1 |
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