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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000013_pilon:2679548..2682837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035354 ID=XLOC_035354|Name=XLOC_035354|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3290bp|location=Sequence derived from alignment at sc0000013_pilon:2679548..2682837- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATCATCATCTTCCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGAC
GACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCCA
AAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGCT
GATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACACC
AGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAGT
TTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCACATAACGCA
GAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACATGTCCTGG
TAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTTTCGAGATG
ATGATGATGATGGAATCGATATGATCTCATCCTGTTCATCTGCATCTGAA
ATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCACACGTAAC
TATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGGTAAGATAATTC
TTTGCAAAACTGACCGATACTGTTGTAGCTACATATCATAAATGAATTGG
AAACTTTTTTCGTTTATCAGAGTTTCTTGAAGTTATTACTTTCTGAGTTA
TCTTCAAATCGTTTAGATTTTTGACGAATGAGTGATGCAATTCCAAGCAA
GTTTGGGTCTTGTTGAAATTTTCTGAATATCACAAGTTGCCATTTTTCTT
GCAAAGTACTTTGAGTTTTTAGTCAACTCCTCACCCAACTCTTCTTCATG
GCTTAGGTTTTGATTGTTAAAATAAAACACATTAAATTCTATACTAGGAC
ACGGAGGTTTTGATGGACCAATCATGCCTCGTGCTGATATCTTCTTGCCA
CCAAAAATGGAGAACGACATTTCGTTAGAAGATTTAGATAGTTATTCACA
CGATGGAGACGTTGAACCTCACATTCCCAAATGTCGTGCTCCACCACAAG
AGGACTTGTACTTCATGTACAAAAAACTCTTAACGGATCCCTTTAGGAAC
ACAAAACCTGTCATTGATTTGAGGCCAACAACCTCCAGTTTAAGCCTTAT
TTCATCTGACACGGTCTTTGATTGGCCAGTTCGGGAAAGATTTGAGGTCC
CCTATGTAGAGCCAACAAAACTTCCGCCCATTGGTTATGGGTTTCACCAC
GCAAATACCAGGCAAGAGAATATGGTCGGCCGGCTTAATCGTTTTCAGAC
GGACAGAGAATCCTTAAGAAACCAACCGCTTAAGTTTCCAAGCATTATTC
AAATGAACAACTTGAATGCTCAATTAAGAACAATGTCAAGATCGAGCACT
GCATGCTCTGGTAGTATTAACGATTCGTATTCAAGAAGTTCTTCCAGATC
CTCCTATTCATCGGCTAGAAGCAAAGGCCAAACAGCCCAAAGTTATATCA
ATAATATAAAAGAGAACCAATGCACCTGGACAAAGAATGAACAGATTAAT
CTAAAAGGGGAGAAACGGATTAGACGGAAACTTTTGGACGGCGCATATCC
GAACTCCACGGTAAAGGAGGATAAACTACCTACACTTTTAAGGTGAGAAT
TCAAACTTCATAGTTATTTCTTCGTCCTCGAAACTCATGCTTAATACTCC
TGTCTCAGTAATCCAGCGAGATAGTGGGGACAATAGCTCGAAAATCCAGT
CATAATTATCAAACTTGTATAGTGTATTTCATATTTGAGACGATATTATA
GTGCAGCTTTCGCACGAGGTGAAATTCCTTCCCTTCTTATTTTTTTGGAG
AAGGTTCCAACAGATAGGTTACACGGAGGGCTCTAAGTGGCCCGTCTCGT
CTGTTCTTATTCTTGATATTCTACATATATCTTTGAAAGACAAAATTTAA
AGTGAAGATGGATCCAGTTTATTTCCGTTCGCTTTAATCTTTCTGGTATC
TTTCAAATTTCGTTGCTTTTCATCTTCAGGTTTGTCTGGAAGGGCAAACA
CAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGCACAAAAAGATCA
ATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCTTCTTGG
GCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAGAGGAATTGACGT
TAACATAAAAGACCAACATCACAAAACGCCTTTATTTAAAGCGATCGACA
TGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCCAAGGCC
CGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCTCACGGA
ATATGGCGATGATGCTTTTGAAATAATTGATTTTTTTTATAATGGGCGTG
GTATCCGTGATATCGACATGGGGAGCAATGGAATGTCTTTACTCCATCAA
GCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGTCATCAAGATGAT
TCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATAAAAGGT
AAAGTGTAATATTTAGTCCGTGGTTTATTCTTTAATTTTTCCATTTAATA
AGTAATGATAGCAAAATCTTTCTAGATCGGAGTTAAAAGACATCGGGAAT
CTTTTGCTAAAGAATTTTTGAATTCATTGCGCGAAAATTCCCACCAATAA
AGACGGATTGGAGATACAGATACAGATTGGAGTCTAATTTGAGTCTAAGT
GATAATATTATAGGATATTATTTTTATCACTTTTGATAATTCCCTTCACA
CATAAAGCCCACATGTTGTTAGGGTATCCGCTTTTGAACAAGCAGTGATA
AGCGAGCATTCTGTATTAACAGGAAATTTTCCTTTCAATAAACTTTTTCT
CTCTGTATTTTAGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCCA
GACCTCTTATTGGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACGA
CTCGTTTATGAAAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGCT
ACAAAATATTGCAAGGTTTCAAAGTTAATAAAAAGACGGGAAAACGAATA
TTTAAATATCGACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACGT
CAAGGCTAAGGACAATAATCAACGTGGTTCTACACCACCTAAACAAAAGG
GACAAAAAGACGCTCCTTATAATATCAACCCTAAGATGGATGACCCAGAG
TATCGAGCACATATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGCC
CAAACGGGAAGATCTTTATTACGATCCACTAAGCATTTAA Coding sequence (CDS) from alignment at sc0000013_pilon:2679548..2682837- >XLOC_035354 ID=XLOC_035354|Name=XLOC_035354|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4458bp|location=Sequence derived from alignment at sc0000013_pilon:2679548..2682837- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATCATCATCTTCCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGAC
GACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCCA
AAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGCT
GATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACACC
AGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAGT
TTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCACATAACGCA
GAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACATGTCCTGG
TAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTTTCGAGATG
ATGATGATGATGGAATCGATATGATCTCATCCTGTTCATCTGCATCTGAA
ATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCACACGTAAC
TATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGTTCATCATCATC
TTCCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGACGACCTTCACGAG
AAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCCAAAAAAAGAAGTA
GAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGCTGATGTTTATGAC
CAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACACCAGTGCCCTTATC
TGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAGTTTCAAGACATCG
AAACATCGGAATTACAAATAATTCCATCACATAACGCAGAAGTGGCACAG
AAACGACCACGCACGGCACGTGTCCTTACATGTCCTGGTAACCTACCAGC
TCCAACACGAACGCAAACCAGAATGAGGTTTCGAGATGATGATGATGATG
GAATCGATATGATCTCATCCTGTTCATCTGCATCTGAAATATCCATCAAA
AGTTTTCACTCAGACTCCACAATCAGTCCACACGTAACTATTGTTGCTCC
CTTCACACCGAGATTCTCTCGTATGGGACACGGAGGTTTTGATGGACCAA
TCATGCCTCGTGCTGATATCTTCTTGCCACCAAAAATGGAGAACGACATT
TCGTTAGAAGATTTAGATAGTTATTCACACGATGGAGACGTTGAACCTCA
CATTCCCAAATGTCGTGCTCCACCACAAGAGGACTTGTACTTCATGTACA
AAAAACTCTTAACGGATCCCTTTAGGAACACAAAACCTGTCATTGATTTG
AGGCCAACAACCTCCAGTTTAAGCCTTATTTCATCTGACACGGTCTTTGA
TTGGCCAGTTCGGGAAAGATTTGAGGTCCCCTATGTAGAGCCAACAAAAC
TTCCGCCCATTGGTTATGGGTTTCACCACGCAAATACCAGGCAAGAGAAT
ATGGTCGGCCGGCTTAATCGTTTTCAGACGGACAGAGAATCCTTAAGAAA
CCAACCGCTTAAGTTTCCAAGCATTATTCAAATGAACAACTTGAATGCTC
AATTAAGAACAATGTCAAGATCGAGCACTGCATGCTCTGGTAGTATTAAC
GATTCGTATTCAAGAAGTTCTTCCAGATCCTCCTATTCATCGGCTAGAAG
CAAAGGCCAAACAGCCCAAAGTTATATCAATAATATAAAAGAGAACCAAT
GCACCTGGACAAAGAATGAACAGATTAATCTAAAAGGGGAGAAACGGATT
AGACGGAAACTTTTGGACGGCGCATATCCGAACTCCACGGTAAAGGAGGA
TAAACTACCTACACTTTTAAGGACACGGAGGTTTTGATGGACCAATCATG
CCTCGTGCTGATATCTTCTTGCCACCAAAAATGGAGAACGACATTTCGTT
AGAAGATTTAGATAGTTATTCACACGATGGAGACGTTGAACCTCACATTC
CCAAATGTCGTGCTCCACCACAAGAGGACTTGTACTTCATGTACAAAAAA
CTCTTAACGGATCCCTTTAGGAACACAAAACCTGTCATTGATTTGAGGCC
AACAACCTCCAGTTTAAGCCTTATTTCATCTGACACGGTCTTTGATTGGC
CAGTTCGGGAAAGATTTGAGGTCCCCTATGTAGAGCCAACAAAACTTCCG
CCCATTGGTTATGGGTTTCACCACGCAAATACCAGGCAAGAGAATATGGT
CGGCCGGCTTAATCGTTTTCAGACGGACAGAGAATCCTTAAGAAACCAAC
CGCTTAAGTTTCCAAGCATTATTCAAATGAACAACTTGAATGCTCAATTA
AGAACAATGTCAAGATCGAGCACTGCATGCTCTGGTAGTATTAACGATTC
GTATTCAAGAAGTTCTTCCAGATCCTCCTATTCATCGGCTAGAAGCAAAG
GCCAAACAGCCCAAAGTTATATCAATAATATAAAAGAGAACCAATGCACC
TGGACAAAGAATGAACAGATTAATCTAAAAGGGGAGAAACGGATTAGACG
GAAACTTTTGGACGGCGCATATCCGAACTCCACGGTAAAGGAGGATAAAC
TACCTACACTTTTAAGGTTTGTCTGGAAGGGCAAACACAAGAAACTTAAA
AATTATCTCAATGACGCCTCCAAGCACAAAAAGATCAATCGAACAGACAA
GTTTGGCCGCACGGCTTTACATTTTGCTGCTTCTTGGGCAGACTACAGGA
TGCTGAAGATTTTATTGGACGTTAGAGGAATTGACGTTAACATAAAAGAC
CAACATCACAAAACGCCTTTATTTAAAGCGATCGACATGAAGTCGCTTGC
TTGTGTTCGTCTATTGGTCCACGCTGGAGCCAAGGCCCGAGTCACATGTT
CAGACGAGCGTAACGCCCTTGAGTACGCTCTCACGGAATATGGCGATGAT
GCTTTTGAAATAATTGATTTTTTTTATAATGGGCGTGGTATCCGTGATAT
CGACATGGGGAGCAATGGAATGTCTTTACTCCATCAAGCTGTGGTCACAA
AAAAACACGTGACAAACGTAAAAGTCATCAAGATGATTCTGGAACCAGGT
CTGGTTGATGTGAACGCCGTTGAGGGTGATAAAAGGTTTGTCTGGAAGGG
CAAACACAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGCACAAAA
AGATCAATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCT
TCTTGGGCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAGAGGAAT
TGACGTTAACATAAAAGACCAACATCACAAAACGCCTTTATTTAAAGCGA
TCGACATGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCC
AAGGCCCGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCT
CACGGAATATGGCGATGATGCTTTTGAAATAATTGATTTTTTTTATAATG
GGCGTGGTATCCGTGATATCGACATGGGGAGCAATGGAATGTCTTTACTC
CATCAAGCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGTCATCAA
GATGATTCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATA
AAAGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCCAGACCTCTTA
TTGGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACGACTCGTTTAT
GAAAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGCTACAAAATAT
TGCAAGGTTTCAAAGTTAATAAAAAGACGGGAAAACGAATATTTAAATAT
CGACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACGTCAAGGCTAA
GGACAATAATCAACGTGGTTCTACACCACCTAAACAAAAGGGACAAAAAG
ACGCTCCTTATAATATCAACCCTAAGATGGATGACCCAGAGTATCGAGCA
CATATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGCCCAAACGGGA
AGATCTTTATTACGATCCACTAAGCATTTAAGACCCCACTCATCTTAGCT
GCTCAATCCAAGCGTCCAGACCTCTTATTGGCCCTCTTAGAAAATGGTGC
AGACCCAAAACATTACGACTCGTTTATGAAAAACGCAATTTGCTACACCG
AGAAAGACTCCACTTGCTACAAAATATTGCAAGGTTTCAAAGTTAATAAA
AAGACGGGAAAACGAATATTTAAATATCGACCCGATGGGCAACTTGCAAC
TGTTCAAGCTATAAACGTCAAGGCTAAGGACAATAATCAACGTGGTTCTA
CACCACCTAAACAAAAGGGACAAAAAGACGCTCCTTATAATATCAACCCT
AAGATGGATGACCCAGAGTATCGAGCACATATCACCAGTCTGTTCACGGC
ATCCAAATTCAAGGAGCCCAAACGGGAAGATCTTTATTACGATCCACTAA
GCATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000013_pilon | genome | sc0000013_pilon:2679548..2682837 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1804-2229:427 |
| Aaloc | 1285-1800:1311 |
| Aaloc | 541-1281:2442 |
| Aaloc | 1-537:3291 |
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