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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:537989..539568- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035308 ID=XLOC_035308|Name=XLOC_035308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1580bp|location=Sequence derived from alignment at sc0000127_pilon:537989..539568- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCGAACAAAGAAATCGTACGATAACAAAAGCTACTGCAAACGGTA
CCGCCAAAAGGATCCAGAAAAATACCGTAAAGATGATGCAGATCGTAAAC
GTTACCAACGGTATTTAAAGAAAGTGAATAACCCCGAGCTGTATGCTGAG
CTTAAGAAAAAGAACCGAGACAGGATGCGGTTATCCCGGGAATTAAAGAA
GCGTGCTGCTCAAGAACCTGCGCCCGACCCTGAACCTGAGAGCGCTTTTT
CATCAAAACAATCAAAGTATCGCAGTCTGAAGCGTGCAGAAATAAACTTG
CCAAATTCACCAAACAAAAAAATGGAGGTCATCGGGTCACTTGCTAAGAA
GTACAAGCTGCGCAATGCTTTATCGAAAAAGAAAGGGAGAAAGTACGAGG
ATCTAAGTGAAGAACAGGTCGAATGGTTGAAGGACTTCCTGGAACGTTCA
GACATGACCTATATCAATCCAGGGAAAAAAGACCATGTTTACATTGGTAA
GATCGATGGTGTGTCCCAATATGTGCAAAAGCAATATCTTTTGTGGACAC
TTCGAGACACTCTGGACATTATCAATGGTAATGACGAAATAAGAAGGGAA
AAGAGGAATGAGAATAGCTTCCAGGACATGTTTGGGAAAAAACTTTCTTT
TGCAAGACTGTACAACTTTTTTAAAGTTCATAAGCAATATGTTTGGAACA
GAGATATTGCCGAGTCCTCCTGCCTGTGTGAGGTTTGCGAGAATGCTTGC
TTACTTGCAAAAGGAGTCAATAAAAGTTTGAAATTGAAGCTTCCAACAAA
CCCCCATGATCTTGTCGAGAAGTACTCCTGTGGTAGAGAATCTAACTGTA
TGAACAACCAATGTAAAAATTGTGATGTCCCCCATTGGGAATGTGATGAA
TCAAGTGATATTGGATCAGACAATGACGAATCGGATACCTCGGCTGATAG
TTCCAGCAGCGAAGACGAATCAGACAAAACCATCACTTTTTACCGCTGGG
GAAAGACTGGGCGAACTCAGAAGATTCAAGTCACGATGGACAAAGACGAA
GCTTGGGAAACATGGTGTATGGTCATTAAAGATCTGAAAGGCCACATTTA
CCGAAAAAGAAAGCAGGTACCTAAGCTAATTTTATTTTCAAATCAAAACT
AAAGACATAATTGTAAAGGCTTTCATTCTGTAACACACTAAGTTTTTGTG
TGTTACAGAAGGACAAAAAAAAGATATCCATTCATTCCAAGTCATCGTTT
GCTCTCCGAAGAAATTATTTCATGTCGTTTCTGTCTGTAAAAATTTAAGA
GAATTGATATTTGAGTGCTGACCCAGATATCCCTGGAGCGGATTATTCAG
ATTGGTGAAGTGCCGAGACTGTGGACTGGTTGATTAATGACGATTATTGT
CATATTTGATTTTCTTAGGTTGAGTTCTACAATGACTTGAAGCAAAATCT
GAAACCAAATGAAGCCATTATTCAGGTCGATTACAGCGAAGGATACAAGA
ATAGAAACCAAGACGAAATACAGTCTGCGTACTTCGGCCACGAGACTTTC
AGCATTTTCACGGCGTGTGGATACTTCCGT Coding sequence (CDS) from alignment at sc0000127_pilon:537989..539568- >XLOC_035308 ID=XLOC_035308|Name=XLOC_035308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2556bp|location=Sequence derived from alignment at sc0000127_pilon:537989..539568- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCGAACAAAGAAATCGTACGATAACAAAAGCTACTGCAAACGGTA
CCGCCAAAAGGATCCAGAAAAATACCGTAAAGATGATGCAGATCGTAAAC
GTTACCAACGGTATTTAAAGAAAGTGAATAACCCCGAGCTGTATGCTGAG
CTTAAGAAAAAGAACCGAGACAGGATGCGGTTATCCCGGGAATTAAAGAA
GCGTGCTGCTCAAGAACCTGCGCCCGACCCTGAACCTGAGAGCGCTTTTT
CATCAAAACAATCAAAGTATCGCAGTCTGAAGCGTGCAGAAATAAACTTG
CCAAATTCACCAAACAAAAAAATGGAGGTCATCGGGTCACTTGCTAAGAA
GTACAAGCTGCGCAATGCTTTATCGAAAAAGAAAGGGAGAAAGTACGAGG
ATCTAAGTGAAGAACAGGTCGAATGGTTGAAGGACTTCCTGGAACGTTCA
GACATGACCTATATCAATCCAGGGAAAAAAGACCATGTTTACATTGGTAA
GATCGATGGTGTGTCCCAATATGTGCAAAAGCAATATCTTTTGTGGACAC
TTCGAGACACTCTGGACATTATCAATGGTAATGACGAAATAAGAAGGGAA
AAGAGGAATGAGAATAGCTTCCAGGACATGTTTGGGAAAAAACTTTCTTT
TGCAAGACTGTACAACTTTTTTAAAGTTCATAAGCAATATGTTTGGAACA
GAGATATTGCCGAGTCCTCCTGCCTGTGTGAGGTTTGCGAGAATGCTTGC
TTACTTGCAAAAGGAGTCAATAAAAGTTTGAAATTGAAGCTTCCAACAAA
CCCCCATGATCTTGTCGAGAAGTACTCCTGTGGTAGAGAATCTAACTGTA
TGAACAACCAATGTAAAAATTGTGATGTCCCCCATTGGGAATGTGATGAA
TCAAGTGATATTGGATCAGACAATGACGAATCGGATACCTCGGCTGATAG
TTCCAGCAGCGAAGACGAATCAGACAAAACCATCACTTTTTACCGCTGGG
GAAAGACTGGGCGAACTCAGAAGATTCAAGTCACGATGGACAAAGACGAA
GCTTGGGAAACATGGTGTATGGTCATTAAAGATCTGAAAGGCCACATTTA
CCGAAAAAGAAAGCAGATGGGTCGAACAAAGAAATCGTACGATAACAAAA
GCTACTGCAAACGGTACCGCCAAAAGGATCCAGAAAAATACCGTAAAGAT
GATGCAGATCGTAAACGTTACCAACGGTATTTAAAGAAAGTGAATAACCC
CGAGCTGTATGCTGAGCTTAAGAAAAAGAACCGAGACAGGATGCGGTTAT
CCCGGGAATTAAAGAAGCGTGCTGCTCAAGAACCTGCGCCCGACCCTGAA
CCTGAGAGCGCTTTTTCATCAAAACAATCAAAGTATCGCAGTCTGAAGCG
TGCAGAAATAAACTTGCCAAATTCACCAAACAAAAAAATGGAGGTCATCG
GGTCACTTGCTAAGAAGTACAAGCTGCGCAATGCTTTATCGAAAAAGAAA
GGGAGAAAGTACGAGGATCTAAGTGAAGAACAGGTCGAATGGTTGAAGGA
CTTCCTGGAACGTTCAGACATGACCTATATCAATCCAGGGAAAAAAGACC
ATGTTTACATTGGTAAGATCGATGGTGTGTCCCAATATGTGCAAAAGCAA
TATCTTTTGTGGACACTTCGAGACACTCTGGACATTATCAATGGTAATGA
CGAAATAAGAAGGGAAAAGAGGAATGAGAATAGCTTCCAGGACATGTTTG
GGAAAAAACTTTCTTTTGCAAGACTGTACAACTTTTTTAAAGTTCATAAG
CAATATGTTTGGAACAGAGATATTGCCGAGTCCTCCTGCCTGTGTGAGGT
TTGCGAGAATGCTTGCTTACTTGCAAAAGGAGTCAATAAAAGTTTGAAAT
TGAAGCTTCCAACAAACCCCCATGATCTTGTCGAGAAGTACTCCTGTGGT
AGAGAATCTAACTGTATGAACAACCAATGTAAAAATTGTGATGTCCCCCA
TTGGGAATGTGATGAATCAAGTGATATTGGATCAGACAATGACGAATCGG
ATACCTCGGCTGATAGTTCCAGCAGCGAAGACGAATCAGACAAAACCATC
ACTTTTTACCGCTGGGGAAAGACTGGGCGAACTCAGAAGATTCAAGTCAC
GATGGACAAAGACGAAGCTTGGGAAACATGGTGTATGGTCATTAAAGATC
TGAAAGGCCACATTTACCGAAAAAGAAAGCAGGTTGAGTTCTACAATGAC
TTGAAGCAAAATCTGAAACCAAATGAAGCCATTATTCAGGTCGATTACAG
CGAAGGATACAAGAATAGAAACCAAGACGAAATACAGTCTGCGTACTTCG
GCCACGAGACTTTCAGCATTTTCACGGCGTGTGGATACTTCCGTGTTGAG
TTCTACAATGACTTGAAGCAAAATCTGAAACCAAATGAAGCCATTATTCA
GGTCGATTACAGCGAAGGATACAAGAATAGAAACCAAGACGAAATACAGT
CTGCGTACTTCGGCCACGAGACTTTCAGCATTTTCACGGCGTGTGGATAC
TTCCGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:537989..539568 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1117-1278:163 |
| Aaloc | 1-1116:1581 |
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