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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:558153..560821+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035288 ID=XLOC_035288|Name=XLOC_035288|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2669bp|location=Sequence derived from alignment at sc0000042_pilon:558153..560821+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACAGCGATATCCTCAACTATCCATTCATGCTGCAAATTATCCACC
ACCACCTCTATACAAAAACCTTGCTACCGTTGTAAGCCTTTCTAAATGGG
CAGCACTTGGCACCATTGTTTTGGGAGAGCGATTGCAAATATGGCAAACG
ATGAACATGCAACCACCGTCCATGTATACTTGGGCACAAGAGCATAAGGT
AGGTATCACTCTGCCTTCATTGATCCTTGTTATTTTTCTTCCAAACATCT
AACCTAGTTTGCAGTTTATGAATTTTGTTCGAAATCCAAAATGTTTTACA
AACTTACTTAAATATTTGTAGAATTTATGATTATAATAGTAGCAAAACTA
TTCAGCAGTATCCCACCAACACTTGTTCTTAATCgtttatttttttggct
cacTACATTATGAGAAGTTATCAATGAATAAGAAAATGTATGTTTCAAGG
CAATACAATATGGATGAAGATGATcaagtttgttttttcttcttttgaac
aGGTTCTTGCTTGTTTTGCAACATTCTTCCTTGGTAACTCTGTGGAAGGA
GGTCTCGTTCAAACTGGAGCTTTCGAAGTTGAACTGAAtggtaaatattt
tttgtgttttctcctttaatcaaggttttttctttggaagcgtttcattt
aatttcgtttATCTGGGTTACTGTGGTTTGTCAATTTGTTGCCtaccttt
ttttgagattttcatcattttaacttttgattttcattttcatttcattt
aacaaagattttcTATGGAGACTTGAAGGGGGGAAGGTCATTTTGGCTTA
GAGACCCTTGGAAAGTCAACTTACTTTTAAAGCTCCTCATTTGCAAAAGC
TAATTGTACGAACTGATAGAGCCTCAAGAGTAGTAATCTCCATTTTGTCT
CATTTCGTTGATTAAGTAAGTCCGCTGGATATGGATGATACATcttcaaa
aaagcaaatttttatgCTTATGTCAGTATTTTGGAGaaactttttgatga
aaaatattaCTTTCGGCAGATGCGTTTGGAAGAGTAATATCGATTATTGG
TATAGTTTATCAGAGTTTATAGGGTTTCCATGCCTATATATCttgagata
tttgagtttgaaattctgctgattcagcagaTAAGGGCCAAAAACACTCA
AAACGCTCAACGCCGAgttagcaaaatttcaaactcaaatatatCGAAAT
CTAGCCATGAAAACTCAATAAATTATACctctaatcgcacgatgggttat
tttttcttatttggcacgccctcaaagagagcaattaatcgttaattgca
tcctgtagaaggcaattaatcgttaatcacactctccaatgcggcgccat
tgtttacaaaattgattttaatgatttttcttacattttttttgcatcga
acgttttaattgcattcgaaatttattttgtgagaaagaaaatcaataaa
caacaataaaagaaagacataaagagaagagaaaaatataaaactctcag
tgtaatttctgtaatttactttccgaactgggaaaaagtagtgaaagcca
ttgtgcgattagctcgtaatcacataataactcgtacaattcgaaaattg
cactcatgatttttttgtttcgaattttcctcgtcctttcggactcggta
aattaataacaaaaaaatcactcgtgcaattatattcgaattgcactcgt
tatcatgtgattacatatactaattgaTATAACTCTTCAAGACGCATCCG
CTAAAAGTaatcttttttcgtcaaaattttctcaaaatgctGACGCCAGC
ATAAAAATTAGCTTTTTTGAAGATCTACTCTACACTACATGCTCTCATGC
TATCATTTGCAGGTTGGTACAATTAGttttatgtaaataaggaacttaaa
aaattgactttccaaAGGTCTCTGGGTCAAAAAGACCTTACCACCTTTAA
AGCTCCATAAAAAATATTCCCCAGCTTTGCCAAGttggcaaaaactggtt
ttgaaGTCCTAAGGAACAATAtaatgagaaaatgaaaaataaacccATAC
GGTTGAAGCAAAAAAGGAATTTCACCACTGGATTAATGTTAAAATAATTC
TCATTAGGATATGACTCATTTCCTGGGGTAACTCCTGTCCTCCTATACAT
GGAATTTACACAAGGGTGGTGATCAGTTCGATTTCTACAAAAAACGCTTT
AGATTGTTCTGCCTGAACAGATATTCACATTCGTCACATTCCTTTAGAGC
AGAGCCCCCTCCCCGAGTTTATAGGGTTTCCATGCCTATATGTATATAtc
ttagaatatttttgtttgaaattctgCATTGAAATTCCACTACagtcagc
aaaattttggcaaatttaaacttaatttcgaaaaatgtttttttcaggtA
TGCCCATTTGGTCCAAATTGAAATCAGGTCGAATTCCACAGGGCAACGAG
CTCTTTGATATCATCAATTCTCAAATGGATTTATCTGGTAAATCCCAATT
CACACCACCCAAAGGTAATCCACAGTTCGTTGATACTCCGCCCAAACATG
GTGGAGAGGAAAGCCAAGATGTTTTTGACAATGACAACGAGCTCCCTCCC
ATGAATGAAAACCAACAAGCCGATAGTAATGACTTTGCAGAATTTGATTC
TGAAAGAGAAGACTTATAA Coding sequence (CDS) from alignment at sc0000042_pilon:558153..560821+ >XLOC_035288 ID=XLOC_035288|Name=XLOC_035288|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000042_pilon:558153..560821+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACAGCGATATCCTCAACTATCCATTCATGCTGCAAATTATCCACC
ACCACCTCTATACAAAAACCTTGCTACCGTTGTAAGCCTTTCTAAATGGG
CAGCACTTGGCACCATTGTTTTGGGAGAGCGATTGCAAATATGGCAAACG
ATGAACATGCAACCACCGTCCATGTATACTTGGGCACAAGAGCATAAGAT
GCAACAGCGATATCCTCAACTATCCATTCATGCTGCAAATTATCCACCAC
CACCTCTATACAAAAACCTTGCTACCGTTGTAAGCCTTTCTAAATGGGCA
GCACTTGGCACCATTGTTTTGGGAGAGCGATTGCAAATATGGCAAACGAT
GAACATGCAACCACCGTCCATGTATACTTGGGCACAAGAGCATAAGGTTC
TTGCTTGTTTTGCAACATTCTTCCTTGGTAACTCTGTGGAAGGAGGTCTC
GTTCAAACTGGAGCTTTCGAAGTTGAACTGAAtgGTTCTTGCTTGTTTTG
CAACATTCTTCCTTGGTAACTCTGTGGAAGGAGGTCTCGTTCAAACTGGA
GCTTTCGAAGTTGAACTGAAtggtATGCCCATTTGGTCCAAATTGAAATC
AGGTCGAATTCCACAGGGCAACGAGCTCTTTGATATCATCAATTCTCAAA
TGGATTTATCTGGTAAATCCCAATTCACACCACCCAAAGGTAATCCACAG
TTCGTTGATACTCCGCCCAAACATGGTGGAGAGGAAAGCCAAGATGTTTT
TGACAATGACAACGAGCTCCCTCCCATGAATGAAAACCAACAAGCCGATA
GTAATGACTTTGCAGAATTTGATTCTGAAAGAGAAGACTTATAAgtATGC
CCATTTGGTCCAAATTGAAATCAGGTCGAATTCCACAGGGCAACGAGCTC
TTTGATATCATCAATTCTCAAATGGATTTATCTGGTAAATCCCAATTCAC
ACCACCCAAAGGTAATCCACAGTTCGTTGATACTCCGCCCAAACATGGTG
GAGAGGAAAGCCAAGATGTTTTTGACAATGACAACGAGCTCCCTCCCATG
AATGAAAACCAACAAGCCGATAGTAATGACTTTGCAGAATTTGATTCTGA
AAGAGAAGACTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:558153..560821 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-558:2400 |
| Aaloc | 199-285:503 |
| Aaloc | 1-198:1 |
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