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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:457921..461059+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035284 ID=XLOC_035284|Name=XLOC_035284|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3139bp|location=Sequence derived from alignment at sc0000042_pilon:457921..461059+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCTTGAAGCGAAACATGGCGTGTCGGGTTTTCACGACGCTCAAGAAGA
ACTAGAGAAAGTCTCAACTATGAAAGGCGAACTGGATGAGAAGAAAGGCA
AAACATTGGAAGAAATGTCTCAATTGGTATGCTGACTTTATagtcctttt
tttttcttctgggGGACGAGTTTTGCACAACTAACGCTGTTTTGGGTCTG
AGGGATATAGAATAGATGACATTAGATgacattagaaaaaaaataatcaa
aactagATTTTATTCAGATTCGGTGAAATAAAAAGAGTACACTGGACTGC
ACCGGGGATCACTTAGTGGTACGGGAGCTGACAGTGCTGACGGAGATTTG
GTGATTGCTACCAATGTCCCAATGCCGCAATAGATATCTCCTCTGATAAT
GTGGCAATTATAAACAATAATTGTTTTGGAAACGCGTGACAAAATATAGA
CAATTAAAACATAATTGactattgttttttgttttgcagGTGGTTCAATT
AACGAACAGTATATCAGAGAAGAAGAATTCATTAGCTCCTGTCATCAAAG
AATTGAGACCGTTACGTCAACAAGCTCAGGTAACCCTCTGAATTTCTTCT
TGCTTCCTCTCGAATTTTCTGTCGGTTAAATCATCACAAACTGGTACAAA
GGATAATCGACACAATTTTCATGAAAACGATCAATTCCGTTATGATATTT
GAATTTTGAGTGGCATCAGCAGCATAATGGTGACTACTTTTTTGGCCACG
CATGATAGCACAATAGATAACTATTTTTGAGCTCCTTCTTTTCTCCCTCT
TTTCTATTCTTAGACATAAAGGCTGAGGGGTATATTACCGGAAAGGATTC
TTATAGGTCTTGATAAATATTTTCGCTAGAAATAGAGATATTGGTACTAA
ATTCAAGTGCCAAATTCATCAATGCTTCTGTTGAACATGAAATTTCTATT
GAGGACGAACTGCAGTAACTTTACTTCTTAGGAGTTGTCTGTGGAGTACG
AAGAACGAAAAGGAACTTATGAAACAACTGCTGCTGGCCTTGAAAGCAAC
ATGTCCAAACTTGACCAGGTAAAAGGAacggcaaaaaaatttttcgacgT
TTTGAATTGAAATATATACACGTGTATAAGAACttgatcattttttttat
ttttttagcgaaTGTCCCTGCGAAAAACGCTTTGTTTAAGTTTTGCCGAA
TTCGCCataattattttacttttaagTTATTCTATAGAATGGATTTACCT
GttgaaactttctttttcttcgctTTAGGAAGTAAAAGCACTTCGGGAAG
AGGTTTTGGCGGAAGAAAGTCGTTACCATTACATGGAATCCATGATCGAG
GTATCctctcttttctttctttcattctttcattcTTATTGGTAGGAGAC
ATTCAGAGCACGAACTGAAAATCGAAATAATCACTATACAGTCGACTTTT
TCCAATTTGATCTTCGCAAACATTTTTGTTCGTATCGAATTAGAAAATGA
TTCTTATTATGGTAATGCTTTGACGGCTGAGAAGACCATCCTTTATGGCT
CGCATTACAGAGACTTTTTAATAATGGAGGGCTGACTGAACGAGCCTTTG
ACCATGCGAAATTCTCTGCAATGGTTGAAAAAAGATATAGAGGAATGGGC
TGTAAGTCTTCAAACTTCATTTACAAAACTTTCCTTGGCTCCTTCAGTGA
GGTAATAAAAACACTCGTGTGTATTCGGGAtttgaatcaatcaatcaatc
aatcaatcaatcaattttacCTTGTTTGTTATAGGTATTGGAGGTCCAAC
AACAGCGTATCGATGAAGAAATCAAATCTTATGTCAACACTGATAGTTCC
AAGAAATCTCTCAGGTAGAATTATTTGTAGCTGTTAAATTAGATTTTATT
GGACCAAAcagagttttgtttttttttcgttcaaaataatgatttcTTTG
CATGGTCGTTTGATTTCATCGACCTTCATTGTCCTTCGTTGACCTTCTTT
GACCTATATTTATTATGGCTAAAAATCCTAATAAAAGCTACAACCGCTTT
TTTGATATATGCTTTTAGTAGCAAATTGTTTAACACGTTGGTATCTTCCA
gcgattttatttttatcctttaaCTTTTCCTCCAGGGACAAATATTCACA
GAGGATTCACGAACAAGAAGTATTGGGGAAGGTCAGTTTGCTTCTCCTTC
CTTCTTTCTTTCTCACTCTCCAAACTTTCGATCCTTAACTCAAAAGAGTA
ATTTTTGGCTGAGActcgactgttcttatttttaggaattttcaggcgta
aatgttcttaacattttattcatttattgGTCTAAATTCAATTTCCGTGG
CCATTTTCGAGATTTCCTTTATACGAAATTGTTCATATTCAAAAAGCTTG
TACACCTAACTTTAAATGGTATAAATGTTCTTTCCCTCTTTTTACTCagc
taaaaatgttgaaatggTTTTGGTGTATTTTGCTGTTATAAGACCAGCGA
CAGTGCTTATTCATTATTGTTTTGTTTCAGCAATTACGTGAGAAGCAGAA
ATATCTCCGAGAAAATCATGCTCCCAATATGCGCCAAATGAAAATGTGGA
CTGTAAGTGATATCTAATCTTTAGATTGATGTAAACTTTATTTCATAAAG
ATCATGAATCTAACAAAACAAAGCACAAATCTAGCGAAACATTCCTTACA
TTCTACAAATAATATAGCTGCTTTTTTGGTAGTGATCTTTAAACTCATTG
CAATTTGTCCATCCAATTATCCTTAAAATTAATATGTTCGCGAATACCAA
TTATAAAGGGGTACGCGAAAAAGGCACACAAATTGGTAGGACTAAGGTAT
ATCGGATGGACAAAATAAAATGAGTTTCGTAAAAGCCTATGTGGTTTTTG
AAAAGGTCTACATGATTTTGACTACTCAAGCATGATGACAAATAAGCACT
AGATGACTTCAAACAATGTGCTTGATCGTATCATCTAAGGAGAGTTTCAA
TGCTCtgttattttcaactttttgtttcCAGGATCTGACGCAACTGTTGA
AGTGCAAGAAAGAAAGCTTGAGCGGACCAACAACAAACACGGTTGAAGAT
CCGGCTCTGTACGATGAACAAGACCATctcgttctgtaa Coding sequence (CDS) from alignment at sc0000042_pilon:457921..461059+ >XLOC_035284 ID=XLOC_035284|Name=XLOC_035284|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1482bp|location=Sequence derived from alignment at sc0000042_pilon:457921..461059+ (Clytia hemisphaerica_ch_hm2_pilon)
AATCTTGAAGCGAAACATGGCGTGTCGGGTTTTCACGACGCTCAAGAAGA
ACTAGAGAAAGTCTCAACTATGAAAGGCGAACTGGATGAGAAGAAAGGCA
AAACATTGGAAGAAATGTCTCAATTGAATCTTGAAGCGAAACATGGCGTG
TCGGGTTTTCACGACGCTCAAGAAGAACTAGAGAAAGTCTCAACTATGAA
AGGCGAACTGGATGAGAAGAAAGGCAAAACATTGGAAGAAATGTCTCAAT
TGGTGGTTCAATTAACGAACAGTATATCAGAGAAGAAGAATTCATTAGCT
CCTGTCATCAAAGAATTGAGACCGTTACGTCAACAAGCTCAGGTGGTTCA
ATTAACGAACAGTATATCAGAGAAGAAGAATTCATTAGCTCCTGTCATCA
AAGAATTGAGACCGTTACGTCAACAAGCTCAGGAGTTGTCTGTGGAGTAC
GAAGAACGAAAAGGAACTTATGAAACAACTGCTGCTGGCCTTGAAAGCAA
CATGTCCAAACTTGACCAGGAGTTGTCTGTGGAGTACGAAGAACGAAAAG
GAACTTATGAAACAACTGCTGCTGGCCTTGAAAGCAACATGTCCAAACTT
GACCAGGAAGTAAAAGCACTTCGGGAAGAGGTTTTGGCGGAAGAAAGTCG
TTACCATTACATGGAATCCATGATCGAGGAAGTAAAAGCACTTCGGGAAG
AGGTTTTGGCGGAAGAAAGTCGTTACCATTACATGGAATCCATGATCGAG
GTATTGGAGGTCCAACAACAGCGTATCGATGAAGAAATCAAATCTTATGT
CAACACTGATAGTTCCAAGAAATCTCTCAGGTATTGGAGGTCCAACAACA
GCGTATCGATGAAGAAATCAAATCTTATGTCAACACTGATAGTTCCAAGA
AATCTCTCAGGGACAAATATTCACAGAGGATTCACGAACAAGAAGTATTG
GGGAAGGTCAGTTTGCTTCTCCTTCCTTGGACAAATATTCACAGAGGATT
CACGAACAAGAAGTATTGGGGAAGGTCAGTTTGCTTCTCCTTCCTTACCA
GCGACAGTGCTTATTCATTATTGTTTTGTTTCAGCAATTACGTGAGAAGC
AGAAATATCTCCGAGAAAATCATGCTCCCAATATGCGCCAAATGAAAATG
TGGACTACCAGCGACAGTGCTTATTCATTATTGTTTTGTTTCAGCAATTA
CGTGAGAAGCAGAAATATCTCCGAGAAAATCATGCTCCCAATATGCGCCA
AATGAAAATGTGGACTGATCTGACGCAACTGTTGAAGTGCAAGAAAGAAA
GCTTGAGCGGACCAACAACAAACACGGTTGAAGATCCGGCTCTGTACGAT
GAACAAGACCATctcgttctgtaaGATCTGACGCAACTGTTGAAGTGCAA
GAAAGAAAGCTTGAGCGGACCAACAACAAACACGGTTGAAGATCCGGCTC
TGTACGATGAACAAGACCATctcgttctgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:457921..461059 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-741:3032 |
| Aaloc | 526-633:2495 |
| Aaloc | 457-522:2137 |
| Aaloc | 376-453:1785 |
| Aaloc | 304-375:1279 |
| Aaloc | 217-303:982 |
| Aaloc | 127-216:490 |
| Aaloc | 1-126:1 |
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