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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:516274..520839+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035253 ID=XLOC_035253|Name=XLOC_035253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4566bp|location=Sequence derived from alignment at sc0000011_pilon:516274..520839+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCAAAATAGAAGCAATCTATCTGAACGAACAAGATTACTCCAAGA
CACAACAAGTGGGGAAAGTGAAGACGAATTTTCTGTACCAACAGCGCAAA
TATTAGATCCAAATTCAACAGGAAGAATGGATGTAGTACAATCAGACAAC
CCTGATGGTGCAGCAAATGTACCACCCCCTGCACCTCCTGCACAAAATGA
TACAGAACAGGATGAAATGGATGAAGAGATGCTTCAATATGGTGCCAAAA
GTGTTTTGATGCTAATCGTTCCTGTATCTGTTTGTTTACTGGTTGTCGTG
ACAACCATTTCTTCTGTGACTTACTACACCACAAATCAAGGAACTTATTT
GTAAGaatagtttgaaattttttgttgtttgatcTAACTTTGAAGGGTCT
TGTAGattctgatttttatttttttctgtccAAAGAAACAAATAGGGTCC
AAAGTACTCCTCAACAGATCTTATTTTGATTTCTGTTTAACTTTTTCACT
TGACTAAatgcaatttttcagcaaaagagGAAGATTTATCcaattaattt
tgttttgagcttttaaactaAATACACTAGGTGCAACTCCCAATTTTCCT
TCCTAGCCTTGGTGAAATCAACATGCAGCTTATTGACTTTTCATTCCTTT
TCTAGAATCTATACACCATTCCATGAAGAAGGACCTATTTCTTCTGGAGA
AAAGTTTGGTCAAGCTTTAGCAAATGCGCTCATTGTGATAGGAGTAATTC
TTGGGATGACAATCTTCTTGGTTTTACTCTACAAGTACAGGTGCTATATG
GTAAGTTCTTTATTATTATAAGTACATTTTTAGATTATACTATTATTTCC
AATGTGCAAATGTTGAGGTGCCTTATCTTCTGAAGGCTTGGACAagtaaa
taattttgatttttattttttagataatCGAAGGATGGCTTGTTATTTCG
TCTTTGATGTTGCTGTTCTTCTTCACGTTCATTTATTTACAGTAAGTAGA
CTTTTGTTTTGCTTCACTGATGCAAAGAACATCCCAACTCAAATGTTATT
CTCTTGCGAGGAAGTGATAGCAAACTACCAAGAAGTCTACCTCAGTTGTT
TTTCACTACCACTCTCCTCTCTCATGGGGCtttaatcattttaaaaatgt
gtttttgCCGAGTTTTAGACCTCTTCAAGCCAGTTCAAGCCTCTTGCGAT
TTCAAAACGCCACAATAATTTCTTCAACATTTCAGAGAGCTGTTACGTGT
TTACAACATCCCAATGGATTACATGTCAGTGGCGTTGTTGATTTGGAATG
TTGGTTGTGTTGGATTGATATGTATTCATTGGAAGGGACCACTCATTTTA
CAGCAAGCCTACCTTATTCTCATTAGTGCCCTTATGGTAATTCATCTTGT
TTTTAGCCCttctctttttttaaagataactCAAACAAACCAGAAGTTCC
TCAAATTCCACTGCTCACCTTTTGTTTAGCCCATAGTTAACCAGACTAGA
TGACTTGAAACGGTTGAAAAACTTCTAATAGTTAGGTAACAGGgttatta
aaattatattcatttAACTGTTTATTAGTGAAAGTTATGAATGAcggtta
aaaaattcaaaatcattttttcttctaGGCGTTAGTTTTCATCAAGTATT
TACCTGATTGGACACTGTGGTTTATTTTAGCAGCAGTTGCACTTTATGGT
AGGTCCTCCATATAAATTGTTGTTATAGCAGTGCTTGCCGTATAAGCTCA
TATCAACCTCGTTACATTCTATTTGATGAAAGatctcaatttttattttt
tgtcaatcaGCATGcaaagatattttatgttcacaaCTAtacattgggct
attccattaaatttccatacaggtgGAGGaacaaaccttttcaagtcaaa
aaagatttcttggaaatgcgtagatacccccggaaaaatggaaaaatttg
aaaaagatttgttttcatACCTGACGTTTTCATAAGTGActgtggacgaa
ctaaaatcagtcttttacaccttgaaaattaaaaaaaaaaaaaaattacc
ccctggaaaaacagaaaaacactCTTTTAGACCCCCTCGAAATTCTGCTC
AagtcaccccctggaaatgttcgtccacccccttgtATGGACATAAAAGG
GAATGGCCCATTTCTAGGTTCGGATTCATGTTTGACggttattgtttttt
tatttcagactTGTTTGCTGTATTATGTCCGAAAGGTCCTTTGAGAATGT
TGGTCAATCTAGCTCAAGAAAGAAATGAACAGCTCTTTCCTTCCCTTGTT
TATTCATGTAAGTGACTGATCCTTGTTGGTACTTTTCCTTTTTGTGAGAG
GATTCAAGACATTCTGTAATATATCTGTAAATCGAAAACACTTCCAATTT
TTAACCAATTAATTAAGCCATTTTTTGAGGTActgaattttgaatgaaac
tGGTTTCGATCATTCTATTTTCCTTTAAAGATGTTATTATTGACTTAACT
TGCTTTTCAGTTTCTAACATgtttattaatctttttttatttcagcaaCG
GTCATGTACCTGATCAACACAGTGACAGACGATGAAGCACAAGGAACAAC
AGCCTCATCACCAGTAGAAGACAGCGAAAGACAATCTGGTATGAACAGTC
CACCTGCACGTTACTCAGAACAACCTACATTGTTAACACAACCAGGGGAA
GTGGAGATTGTTTCACCATCATCACCACCTGTTCAAGTAAGTTTCAGATC
AATTCACTGGCACCATGTAATTGATGGATGGTTTTTGTTCAATCAAGGTC
TTTGAAGAGCTTGTATGTGATtacaaaaacatcaatttaaaaTTTGTATT
TCTTTAAGAAAACCAAAAACACTACAGACTATTTCACGCCCTACATACGA
TCATCAGATAtgaattaaaaatgtttgaacaAATTATGTTTCTTGGTTAT
ACTTTGTCAATTTATTCATATTATTTGTTTGCGTTTGAACATCTTGCTAG
GATGATTATGAATTTGAGTTATGTCTTCTTGATGAATCAGCCTTGTAAGG
GCTTGTTAAAAAGCTCCATTCAACATATAACACATATTCTTATGGATGAG
GTTCTAGTTTAATATCGAATGATGCCAAACTTCTGAATTTAATCGTACTG
ACGTGCTAACTGCTGTAGAGACTCTTGATGTCATTTAACCCTATTAAATT
CGAACATATTCCCTTTTTAGCATTATAGttaaaaagtttattacaaaCTA
CCAAGACAATTtaactttccttttttcactCATTCTCTCCGTCTTCTTTA
CAGTCGCCATCTAGCGAAGGTGGACATGCGAATAGTGGGTTCACAACTTC
TCCCTCATTGGATGACCACGCTAGACACCAAGAAGCAGCCCAATCATTGA
ACGGTGACCATTCcacaccaccgaccaacacccgacaacaacaacaaggg
caacaaccttcactgaacacaaATCAAGTTCAAatggaagaagaagaaca
agAAGAAAGTCAGTATTTTATTCTTCTTTAAGActttaagattttaagat
ctGAATCGGGTTACTGTACATCTGCCAGTTCTTTTTTCCCTTCCATATTT
GTAACACTTCGAACCAAGGCTAAACAAATCACGTCCGAGATTTTAAATAG
CTTTAAGTTGCAATTGTTAATTGGTCCTTACTTTTATTTAACATTACAAA
ATGAAAGGACTGGTAATTGAGAAGAATAGTATTAACTCTTCCTTTACAGT
TCACCATTTCAGTTTACTGCCATACCAGAAATTGTTACAATTCGAATTAG
TTTATTCGTTGTAGTCGACTACCTTTCCgattgtcaaaaaataagatgAA
CATTATTTTCATATCTTAACCAACTTTTCTCTTCATTTTCAGGGGGCGTC
AAGCTTGGTTTAGGAGATTTCATTTTCTACAGCGTGCTTGTTGGCAAAGC
ATCAGCCAATAAAGATTGGAATACAACCATTGCTTGTTTCTTCGCTATAT
TAATTGTAAGTCTGCACCATTTTTTCAATGTCAAGCGAGTTTCAGCAGAA
AACATTATGATTTTTctcttctagaaaaaaattgtacatgtgGTTGCGGT
GAAGGTTAAAGTATTGTTCAATAACTTTTAACTTCCGGACAAGGATCCTC
GACCTTTTGGAAATCCTAAAGTACTCCAATATACTTTAAAGAAGTTAATG
TCAACTATTGTAATTGTTAATTTCGTGCAGTCTATTCTTCTTAAgcaatt
ttgtttaaaatatttcaatcatCCTTATTTACTCTCAAAAGCAGATCATT
AAATCATCTCTGGATAATCTCTGGATGAAAGTAGAAAAGGAGGTGGGGTA
AAGGATAAACAGGTCCAAAAGGGAACCTTATCTaatgaaattactttttc
ttattttcagggATTGTGCTTAACATTATTACTATTGGCAATTCACCGGA
AGGCCTTACCTGCGCTTCCCATCTCCATTTTCTTTGGGCTGTTATTCAAC
TTCGCTACACAATATCTTGTACGGCCGTACGCCGAAACTTTATCAGTCAA
CCAAGTATTTATATGA Coding sequence (CDS) from alignment at sc0000011_pilon:516274..520839+ >XLOC_035253 ID=XLOC_035253|Name=XLOC_035253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3096bp|location=Sequence derived from alignment at sc0000011_pilon:516274..520839+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCAAAATAGAAGCAATCTATCTGAACGAACAAGATTACTCCAAGA
CACAACAAGTGGGGAAAGTGAAGACGAATTTTCTGTACCAACAGCGCAAA
TATTAGATCCAAATTCAACAGGAAGAATGGATGTAGTACAATCAGACAAC
CCTGATGGTGCAGCAAATGTACCACCCCCTGCACCTCCTGCACAAAATGA
TACAGAACAGGATGAAATGGATGAAGAGATGCTTCAATATGGTGCCAAAA
GTGTTTTGATGCTAATCGTTCCTGTATCTGTTTGTTTACTGGTTGTCGTG
ACAACCATTTCTTCTGTGACTTACTACACCACAAATCAAGGAACTTATTT
ATGTCTCAAAATAGAAGCAATCTATCTGAACGAACAAGATTACTCCAAGA
CACAACAAGTGGGGAAAGTGAAGACGAATTTTCTGTACCAACAGCGCAAA
TATTAGATCCAAATTCAACAGGAAGAATGGATGTAGTACAATCAGACAAC
CCTGATGGTGCAGCAAATGTACCACCCCCTGCACCTCCTGCACAAAATGA
TACAGAACAGGATGAAATGGATGAAGAGATGCTTCAATATGGTGCCAAAA
GTGTTTTGATGCTAATCGTTCCTGTATCTGTTTGTTTACTGGTTGTCGTG
ACAACCATTTCTTCTGTGACTTACTACACCACAAATCAAGGAACTTATTT
AATCTATACACCATTCCATGAAGAAGGACCTATTTCTTCTGGAGAAAAGT
TTGGTCAAGCTTTAGCAAATGCGCTCATTGTGATAGGAGTAATTCTTGGG
ATGACAATCTTCTTGGTTTTACTCTACAAGTACAGGTGCTATATGAATCT
ATACACCATTCCATGAAGAAGGACCTATTTCTTCTGGAGAAAAGTTTGGT
CAAGCTTTAGCAAATGCGCTCATTGTGATAGGAGTAATTCTTGGGATGAC
AATCTTCTTGGTTTTACTCTACAAGTACAGGTGCTATATGataatCGAAG
GATGGCTTGTTATTTCGTCTTTGATGTTGCTGTTCTTCTTCACGTTCATT
TATTTACAataatCGAAGGATGGCTTGTTATTTCGTCTTTGATGTTGCTG
TTCTTCTTCACGTTCATTTATTTACAAGAGCTGTTACGTGTTTACAACAT
CCCAATGGATTACATGTCAGTGGCGTTGTTGATTTGGAATGTTGGTTGTG
TTGGATTGATATGTATTCATTGGAAGGGACCACTCATTTTACAGCAAGCC
TACCTTATTCTCATTAGTGCCCTTATGAGAGCTGTTACGTGTTTACAACA
TCCCAATGGATTACATGTCAGTGGCGTTGTTGATTTGGAATGTTGGTTGT
GTTGGATTGATATGTATTCATTGGAAGGGACCACTCATTTTACAGCAAGC
CTACCTTATTCTCATTAGTGCCCTTATGGCGTTAGTTTTCATCAAGTATT
TACCTGATTGGACACTGTGGTTTATTTTAGCAGCAGTTGCACTTTATGGC
GTTAGTTTTCATCAAGTATTTACCTGATTGGACACTGTGGTTTATTTTAG
CAGCAGTTGCACTTTATGactTGTTTGCTGTATTATGTCCGAAAGGTCCT
TTGAGAATGTTGGTCAATCTAGCTCAAGAAAGAAATGAACAGCTCTTTCC
TTCCCTTGTTTATTCATactTGTTTGCTGTATTATGTCCGAAAGGTCCTT
TGAGAATGTTGGTCAATCTAGCTCAAGAAAGAAATGAACAGCTCTTTCCT
TCCCTTGTTTATTCATcaaCGGTCATGTACCTGATCAACACAGTGACAGA
CGATGAAGCACAAGGAACAACAGCCTCATCACCAGTAGAAGACAGCGAAA
GACAATCTGGTATGAACAGTCCACCTGCACGTTACTCAGAACAACCTACA
TTGTTAACACAACCAGGGGAAGTGGAGATTGTTTCACCATCATCACCACC
TGTTCAAcaaCGGTCATGTACCTGATCAACACAGTGACAGACGATGAAGC
ACAAGGAACAACAGCCTCATCACCAGTAGAAGACAGCGAAAGACAATCTG
GTATGAACAGTCCACCTGCACGTTACTCAGAACAACCTACATTGTTAACA
CAACCAGGGGAAGTGGAGATTGTTTCACCATCATCACCACCTGTTCAATC
GCCATCTAGCGAAGGTGGACATGCGAATAGTGGGTTCACAACTTCTCCCT
CATTGGATGACCACGCTAGACACCAAGAAGCAGCCCAATCATTGAACGGT
GACCATTCcacaccaccgaccaacacccgacaacaacaacaagggcaaca
accttcactgaacacaaATCAAGTTCAAatggaagaagaagaacaagAAG
AAATCGCCATCTAGCGAAGGTGGACATGCGAATAGTGGGTTCACAACTTC
TCCCTCATTGGATGACCACGCTAGACACCAAGAAGCAGCCCAATCATTGA
ACGGTGACCATTCcacaccaccgaccaacacccgacaacaacaacaaggg
caacaaccttcactgaacacaaATCAAGTTCAAatggaagaagaagaaca
agAAGAAAGGGGCGTCAAGCTTGGTTTAGGAGATTTCATTTTCTACAGCG
TGCTTGTTGGCAAAGCATCAGCCAATAAAGATTGGAATACAACCATTGCT
TGTTTCTTCGCTATATTAATTGGGGCGTCAAGCTTGGTTTAGGAGATTTC
ATTTTCTACAGCGTGCTTGTTGGCAAAGCATCAGCCAATAAAGATTGGAA
TACAACCATTGCTTGTTTCTTCGCTATATTAATTggATTGTGCTTAACAT
TATTACTATTGGCAATTCACCGGAAGGCCTTACCTGCGCTTCCCATCTCC
ATTTTCTTTGGGCTGTTATTCAACTTCGCTACACAATATCTTGTACGGCC
GTACGCCGAAACTTTATCAGTCAACCAAGTATTTATATGAggATTGTGCT
TAACATTATTACTATTGGCAATTCACCGGAAGGCCTTACCTGCGCTTCCC
ATCTCCATTTTCTTTGGGCTGTTATTCAACTTCGCTACACAATATCTTGT
ACGGCCGTACGCCGAAACTTTATCAGTCAACCAAGTATTTATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:516274..520839 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1393-1548:4411 |
| Aaloc | 1282-1392:3895 |
| Aaloc | 1075-1278:3304 |
| Aaloc | 886-1074:2548 |
| Aaloc | 787-882:2211 |
| Aaloc | 715-783:1629 |
| Aaloc | 565-714:1237 |
| Aaloc | 496-561:924 |
| Aaloc | 352-495:657 |
| Aaloc | 1-348:1 |
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