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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:233328..240294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035241 ID=XLOC_035241|Name=XLOC_035241|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6967bp|location=Sequence derived from alignment at sc0000252_pilon:233328..240294- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCAGTTTTGATCAACGATGGGAATGCTGAAAATGAAGACATTGTCAA
ATGCGACATCGGTGAATTGGTCTTATCTGTCGAATTGTTGAAAAATCAAG
TGTCACCTTTTATCAGGATATTTAACAATACTAGATCTATCTTAAGGTTT
GTGTTCATTCTCTCCCCTTACTTTACGCGTACAAACTTTTGCGAGCAGAA
ACTTTCGCGATTTTTGCTACTTTTCGCCTTTTTTGTGAAAATCTTTGAAA
ATTGTTAACAGGGTAATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTAA
CAACTTTGAAAATCTTCTTCTAAATTAAAAAAGAAAAACTTCTAAATTGT
GATAAACAGCAAATTTTTAGCCTTTTTAAAGTTAATGAATGAACAACCGT
ATTTATCAGATTTAAGGAACGTTTGTCACTTTTTAGCCAATTTCCGTTTA
AAAATTGATTGAAAACAGGGAATTTCTTCACAATCTGCATAATTTATGCA
AAATTTATGCATAATTTATGCAAAATTATAGCACTTTTTCCACAAAAACG
CCCATAGCTTTTGATCTAAAAAAGTTGAGACTTTGATATAATACATTTTT
TTGCTCAGTTTGAAGAGCTCTATCATGTGGTATAGGTCTTTTTTGATTTT
GAAGACCCCCTAAAAAATCATCAGGACTTACAATTCTGCCTAAAAAAGCA
AAAAATTGCAAATTACGCAAAAACTGCGGATTTTCAAGCTTGGTAACATT
TAAATTCCAAATCAGCACCCTCAAATTGACTAGAATCAATGGTCAAAGCT
TGTTCATCGGCATTTTGAAAAAAAAGTGAAACGTTTTGAGAGGGCTGGTC
ACGGCCTATTTTACTCGTACAATATAGGATAATCGCACTCCTAAAGGCTT
CGAAAATATGACGAAAAAATCTGAACTCGAAAAATATATCCCATATTATA
CTCAGTACCGTGCGATAACTATTACTTATTTGCTTACAAATGAGTAATTC
CAGGCTCTTATTTTTTAGCGATTTTGAACCTTGTTGTTCTTATGAAATTG
TTGTTACAAAAAATATCGTATCTTCAATTTGATGAGTTTTTTTTCATTTT
CAGATGGGAAAGACCATTGCGCACGATTTCTGTGATGTTATTTTTATTGT
ATGTCGTCATACTTAACCCTCGTAAGTTTGATCAAGTGCAACCGATTACA
AAAGTATCCATTACCAGGGGATTTCGTTTGGTATCTACGTCTTTTGGTCA
AGAATTTGTTGTTTTTCTATTTCGTTATTCCAGACTAGTGCTCAACAAGT
GATAAGCACTGTGCGCATGCAATGTATCCGGAGAATCTCAATATTAAAAA
CTAGAGCAGTGCTCGTATCCTTAAGAGCAGGAGTTTTACGCTCGAAACGA
AGGAAGATATGACGTAGCCTATAAATTACTTTTGCAAATAAGTACCTTGC
ATTTAAAACATGCTCAACCATCGATATTTTTTTCAGTATATATTATGCTT
TTGGTGTTGACTTCAATTTTACCCATGATGGTGTACGGTCTGGTACAGTG
CTTAGGAAAAGCCAAGCGGCCGAACAAACGATACAAAGATTTCTTCATTA
AGAAAGGAGATGATTATTATCAGGTGAGCCGGTTTTCTCTACTCATCATC
ATATTCATCATTATCATCATCCTTCGATCTAGGTCTGTGAAGACTAGGTC
GGTTTTCTACCAGCACTTGGGTCACACAAGGACTTTTGATAGATTGGGTG
AGAAAACTAAGTTCAGCCAAAAGTAGTAGTCTAAAAATTAATAAAGATTA
AAGTTTGGCCGATTTGGCACCATCATTGGATCCATTCTACACAAAACATG
AATGTGTTTTATCTTTGTATTTGATGAGGACTCAAATTATGCCGTCCAAA
GAATTAAAGAAATCGAACTCTGCACCTCACAAAACTTTCATATAAAAGCA
TGACTTTGAACAAAATTGAAACATTTTCTTTTAGGATGTGTTGACACAAG
AAGAACGAAGGAAACATTTGAATATGTATCTCAACATGTAAGAAAGTTTG
TGTTCCCTCTCCCCCCTCTCCCCCCATCAACAATCAATGATGAAATTGAA
TGCGTTATGCATTTTCGCTAAACGCTATATTTTCTGACTGATGGTTTTCA
TTTTTCTCCTTATTGCTATCTAACTTTCATCGTCATCAGGTAGGTCCATT
CACCATCTAGCTTGTTGAGTTTTATGCCTAAAAATGTTTTGTTTTAGTTA
CATTTTATTAGTGTTCTTGTCCGTTTTTCTAATAATTCGGGTGTTTTTTA
GAGCCCTCAAAGCCTTTAAATGTTCTTAACTTGTTCTTAACATTTTTGCC
ATAATAAACGTGTACAGACATATTTTGAATTACGGAGAGTTAAAAGACTT
AAAAGCTAAGTGGACTATTTATACACTGACTTTCATGTTGAAATTTAGCT
ACAGTTGACTCTCTCTCTATTTCAATCTTTCCAAAAGCAAGGGCTATTTT
TTCCAAATTAAAAAAAGATTTGATTTAAGGAGAGTATTTCAGACGACTTT
TAAGCTGAGTGTAGCAATGTTTTAGTTCGAATTACAGAAAGATTCGAAAA
TGGTAACAGAGAGTTGATTATAATGTATTTAAATGTTTTATTTTTATCTT
TTAGGCTGGTGCAAACTCAAAAGGGATGCAATGAACTCAATAAAAGATTT
CATCAGTTTTATAGCATCATATTCTGGCATGAGAAGACACGATCGTTAAA
GTATTTCTCTTGTTTTATCAATTTCGATTTCATAAGATTTAAATTTGAAA
ATCTTTTAACGCAGGCTTGTCACAGCCTGGTTTAAATCCTACTAGGTCCC
GAATAAACGTCCTCACCCGGTTATTCATTTTCGAAAAACTTTCGGACCCC
CCCCCCCCCCCCCCGTTCTTATTAGGACCCCCTCTTCCCCGTTTATCTAT
TTTTGAAAATATTTTCAGCTGAATTGCTCTAAATAGCCTGTTTTTAGCTT
GTAATCTTGGGATCTTAGAGTACTATAGCAAGATTTTACATAACGTCAAG
CCACTTTAACTGCTTGAAAAAGATGAATAAAACATAAGTTTACATTTTAT
CTTCCGTTCAGATACTTCATGATGTTCACAGCATTGGTTGTGTTATTCTA
TACATCTTCCATGAGCCACGCTTTATTCATCAATATTCTTCTTCTTTTCC
TCTACAACAAATATCTTTACAAAGGTAAAAGTTATTGAAATGTCTGACTG
TATCAATAGCCGAGTTTTCCTAATTTTTAAATCTTAGAGGGTATTTTGCA
GTTTTTGAGAAAAAAATGGCCAACCTTAAGTACCTTAAAGCACCCTAAAA
TTAATTTTTTAAATAAATGACCTATTAAACGGATTCAGGATTCTCTCTCA
CCAAAATACCCATTACTTTTTGTGATTTAGAAACAATGAATACATTGTAC
CGAATGAAAGCAAGCATAATGAATCTTTTCACTTTGAAATCACACTCAAA
GAAGAAAGAAAGTGCTTCGGAACACACCACTGATGTTGGGCTAGAGACCA
TCGATTCTTCGGAAAGGGTAAAATTTTCTATTATTTCCGTTGCTCTAGAA
CGCTCAGAACGTTCTTGATTAACTAAAAATTATGTGTTTAAAAAAAGAAA
GCAGTCAGTGAAAATAGTCCGATTTGACTGAAATTTTGCACAATTTTTTA
AATCCTCCGGGTTTTTTCTAATTTTCAATTTTGTGTTCTGGGGATCAGTT
TTGTGATACACAGAATCTATAATACTAAACAGCTAACTTAATTCTAGACT
TAAACTCAATTTTACCTATAAACAAGATTGGTTCAAACGTTACTGAAGTT
GAGTCAATACAGCTAGGACGGTCAACAATATAAAATGAATATGACTGTTA
AGACTTTGGGACGCGAGAAGTTTTTTTCGCGTTGGTGCAATGCAACATGC
TCCATCCCATCCCACCAGCACAAGAAAAATGTGCGTGTCTCATGGTTTCT
TTCTTTGTTTCATGGGACAAAAAGTGAGGAAAATACCCAAAAGACACGCT
GATTTTGTCACAGGGACAAAAGTGAGAGAAGCACAAATGTTATTAAAAGA
AAAATGGGGTGGCGACGCGAGAAAGCGTTTCAGGTTGGTGGGATGGAGCA
TGTTGCATTGCACCAACGCGAAAAAAAACTTATCGTGTCCCCAAGCCTTT
AGACCTTTCAAACTGACATATAATTTTTTCTTTACTATAGAGCAAGGAGG
TAGAAGGAGGAGATTCGAGTGCTTCCACATCATCAGAATCAGAGAGCGAT
GAAAGTGAAACAGAAGATGGCAATGATATGGTATGTCCTTTTTCACAAGT
ACTCAGGACGGTTTAATAGAGTTATTTCTCACGTTAGTTATTTACGTAGT
TTTGGACTTCCATACTCAGGGACAGGGACCTATAGGATAAATACAACTCA
TGCACTATTTGATAGCATCAAAAGAGAAGGATGGTGGGTTATGGGGATGC
TAATAAATAAAGGCCAAAATTCTTGGTGAAATTATGGCACTTATTTTCAA
TATTTATCAAAATACAAAAAGAGTTTTTTCCTTTTTCTATACTAAAGCTC
CTATCCATAATTTAGTTGATATACCATGATTGACGTATATTTTGATTTGC
AGAAAATTTCACAAAGTGATGCGCAGAAAAACATGGCTGATAATGGTAAC
ACTCTTTTGTATTATATTATCGAAGCTAAACGTACTTTCATTAATACTTT
TATCGAACTACATTACGGTCGAATGTTCAAATTGTTCTCTTCTTAAAGGT
TTTATTTTTTACATAAGTGTTCCCGTTTCATATCAGCCACATGTTTCGTA
TCAGGACAGTGTCTGCCTATTGTTATATTGTGCTGATATAAGCAAAAATA
TGTTTTCTTTTCCTCTTTCTGACCAATCTTGCTCCACATCTGTGTAAATT
CAATATCAAAAAGCTTATAAATTAAAATTGACGAGTAAGCAAACGACATC
ACTCCTATTTTCCATTGGTAAACGTTATTATATTTCGTTTTTATAACTCG
AAGCCCTCGAACTCGCTCCTTGATTTAAAAGACTCCTGATCTGAGTTATA
GAGAGACTTTAGAACTTCATACTGTTTATGTTCTTTAGGTTCAATGATGT
CAAAATTCTTTTCAACGCGAAGTTGGCGCAAAAGAACTACAGGTTAGAAA
TACTCTTAGATAACAGTAAACATAGCATATCCCATCCTCTAAATTCACTT
ATTCAGACTTCTTGTATAAAAATAAGTTTAGTTTAATTGATGCGGAATTA
TTGTAGCGAATGCTATGCTGAGGCATGGCTGTGGACAGCATTATAGTAGA
GGGCATTTTGTAAAATCGCATGACTGTTTTGTTAGAAGCACTTGTTATAC
ATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAATTACTATGTTTCCAAT
TTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATATGACGGTCTCA
GGCAAAAATCATAGGGTTAAAAATTAATGAAAATTTTAGCTCGAGAAAAC
GGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTAGGATTAGAG
ATATATTGCAAGTATAGGTGATTTCAGTACCTAACTCGAGATATTGAGCT
TCAAAAAGCGCAAAAACCGGACAAAATAGCTGTTTCTGGCTGAAAAACAC
GGTTTTCAAGGGTTAATATCTCGAGTTAGGTACAGAAATCACCTATACTT
GCAATATATCTCTAATCTTAATTTTTTGAGAGCTTTCCAAAAATGTACAA
CAGGTTTCCGTTTTCTCGAGCTAAAATTTTCATTAACTTTTAACCCTATG
ATTTTTGCCTGAGACCGTCATATTTGTCCGAAAATCACACCACAGTGTCC
AAAAAAAAATGGAAACATATTAATTTCGATTCCCCTACCCCTTAGCTTTC
CAAAAATGTATAGCAAGTGCTTCTAACAAAACAGTCGAGCGATTCCAAAA
AATCGAACAAAATTCCCCCTACTATTAATAGATTTAGAGACAAGTTGATG
TACGAGTATTGTAATATCTTCAGAATTTTCTTCTTATAGCACTTTATATA
CGAAGTTAGAAAGCTCACAACTGAGGTACCATTATGGTTCGGGAAAAAGA
AGACTGGAACCGAGACATATGAGACTAAATGTCCGGTAGCGACTAATGTA
AACGAAAGTGGTTGTTAAAATATCGACAGCGAAAAACAGCCAAACCACGT
TCGCACATTTCCTGATTCGATATTTGGCATTTATCAATTCGATCTGACAT
TATTATTCGTTTCTTTTTCTTCAGAATATTGTTCTTCGTGTTATCAAACA
GTTTCCTCCCTTCTTAAGAAACGGGTAAGACTATAACGTTGTGTCATTTG
TTGAACATTTTCCACTAAAGATGTTCGAGTTCACCCAACCAAAAGATTTT
CTGTCAAAAGGATAAAACATTTCTCTTTTTCTTTTCATTTCAGAGATATT
GTCGACACTGTGGAAAAAGTTTTTGTTCAAAGTGTTGTCACATTCGTGTT
CCCAGAGCTTTGATTGGTGCCACTGGTAAGTAGTTTAAAAATATTTTAAA
TTCGAACTTCAGAGAGGTGTCTGGCGTATTTTTAGTCGTGCAAGAATAAC
ATCAGTCAGTTAATAGTCTCAATCATAGAGAAGGGCTAGATGTCGGGTTT
TAAGCCATCGCAGGCAAAAAAAACTTGAATATTGGAAAAAATATTGTTGC
TATTGACGTTTCCGAAAACCCGCGAAGCTTCTGATTGGTCAAGCGCTGAA
ATTCTATTGTAATGTCACGTGACTTAGGTAGTAAGTATCATTGTTTCCCA
TACATTTTCCCTTTCGTTCTAGCACCTGCTGCTTACCAAGAGAAAGTATT
GGTTTGTCAATCTTGTTATAAATTTCTAACGAACCGTTCGAATTCTACTA
CGGAGATTGTCGAATGA Coding sequence (CDS) from alignment at sc0000252_pilon:233328..240294- >XLOC_035241 ID=XLOC_035241|Name=XLOC_035241|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0000252_pilon:233328..240294- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCAGTTTTGATCAACGATGGGAATGCTGAAAATGAAGACATTGTCAA ATGCGACATCGGTGAATTGGTCTTATCTGTCGAATTGTTGAAAAATCAAG TGTCACCTTTTATCAGGATATTTAACAATACTAGATCTATCTTAAGATGT CAGTTTTGATCAACGATGGGAATGCTGAAAATGAAGACATTGTCAAATGC GACATCGGTGAATTGGTCTTATCTGTCGAATTGTTGAAAAATCAAGTGTC ACCTTTTATCAGGATATTTAACAATACTAGATCTATCTTAAGATGGGAAA GACCATTGCGCACGATTTCTGTGATGTTATTTTTATTGTATGTCGTCATA CTTAACCCTCATGGGAAAGACCATTGCGCACGATTTCTGTGATGTTATTT TTATTGTATGTCGTCATACTTAACCCTCTATATATTATGCTTTTGGTGTT GACTTCAATTTTACCCATGATGGTGTACGGTCTGGTACAGTGCTTAGGAA AAGCCAAGCGGCCGAACAAACGATACAAAGATTTCTTCATTAAGAAAGGA GATGATTATTATCAGTATATATTATGCTTTTGGTGTTGACTTCAATTTTA CCCATGATGGTGTACGGTCTGGTACAGTGCTTAGGAAAAGCCAAGCGGCC GAACAAACGATACAAAGATTTCTTCATTAAGAAAGGAGATGATTATTATC AGGATGTGTTGACACAAGAAGAACGAAGGAAACATTTGAATATGTATCTC AACATGATGTGTTGACACAAGAAGAACGAAGGAAACATTTGAATATGTAT CTCAACATGCTGGTGCAAACTCAAAAGGGATGCAATGAACTCAATAAAAG ATTTCATCAGTTTTATAGCATCATATTCTGGCATGAGAAGACACGATCGT TAAAGCTGGTGCAAACTCAAAAGGGATGCAATGAACTCAATAAAAGATTT CATCAGTTTTATAGCATCATATTCTGGCATGAGAAGACACGATCGTTAAA ATACTTCATGATGTTCACAGCATTGGTTGTGTTATTCTATACATCTTCCA TGAGCCACGCTTTATTCATCAATATTCTTCTTCTTTTCCTCTACAACAAA TATCTTTACAAAGATACTTCATGATGTTCACAGCATTGGTTGTGTTATTC TATACATCTTCCATGAGCCACGCTTTATTCATCAATATTCTTCTTCTTTT CCTCTACAACAAATATCTTTACAAAGAAACAATGAATACATTGTACCGAA TGAAAGCAAGCATAATGAATCTTTTCACTTTGAAATCACACTCAAAGAAG AAAGAAAGTGCTTCGGAACACACCACTGATGTTGGGCTAGAGACCATCGA TTCTTCGGAAAGGAAACAATGAATACATTGTACCGAATGAAAGCAAGCAT AATGAATCTTTTCACTTTGAAATCACACTCAAAGAAGAAAGAAAGTGCTT CGGAACACACCACTGATGTTGGGCTAGAGACCATCGATTCTTCGGAAAGG AGCAAGGAGGTAGAAGGAGGAGATTCGAGTGCTTCCACATCATCAGAATC AGAGAGCGATGAAAGTGAAACAGAAGATGGCAATGATATGAGCAAGGAGG TAGAAGGAGGAGATTCGAGTGCTTCCACATCATCAGAATCAGAGAGCGAT GAAAGTGAAACAGAAGATGGCAATGATATGAAAATTTCACAAAGTGATGC GCAGAAAAACATGGCTGATAATGAAAATTTCACAAAGTGATGCGCAGAAA AACATGGCTGATAATGGTTCAATGATGTCAAAATTCTTTTCAACGCGAAG TTGGCGCAAAAGAACTACAGGTTCAATGATGTCAAAATTCTTTTCAACGC GAAGTTGGCGCAAAAGAACTACAGAATATTGTTCTTCGTGTTATCAAACA GTTTCCTCCCTTCTTAAGAAACGGAATATTGTTCTTCGTGTTATCAAACA GTTTCCTCCCTTCTTAAGAAACGGAGATATTGTCGACACTGTGGAAAAAG TTTTTGTTCAAAGTGTTGTCACATTCGTGTTCCCAGAGCTTTGATTGGTG CCACTGAGATATTGTCGACACTGTGGAAAAAGTTTTTGTTCAAAGTGTTG TCACATTCGTGTTCCCAGAGCTTTGATTGGTGCCACTGCACCTGCTGCTT ACCAAGAGAAAGTATTGGTTTGTCAATCTTGTTATAAATTTCTAACGAAC CGTTCGAATTCTACTACGGAGATTGTCGAATGACACCTGCTGCTTACCAA GAGAAAGTATTGGTTTGTCAATCTTGTTATAAATTTCTAACGAACCGTTC GAATTCTACTACGGAGATTGTCGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000252_pilon | genome | sc0000252_pilon:233328..240294 - |
Properties
| Property Name | Value |
| Aaloc | 1072-1164:94 |
| Aaloc | 988-1068:475 |
| Aaloc | 940-987:642 |
| Aaloc | 886-936:1828 |
| Aaloc | 841-882:2316 |
| Aaloc | 751-840:2728 |
| Aaloc | 616-750:3536 |
| Aaloc | 502-612:3856 |
| Aaloc | 406-498:4313 |
| Aaloc | 352-402:4984 |
| Aaloc | 217-351:5480 |
| Aaloc | 148-213:5864 |
| Aaloc | 1-144:6968 |
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