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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:185599..189095- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035239 ID=XLOC_035239|Name=XLOC_035239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3497bp|location=Sequence derived from alignment at sc0000252_pilon:185599..189095- (Clytia hemisphaerica_ch_hm2_pilon)
TTAACTGATCACCTTCGTTGTGCTGGTATGTCTTGTTCACTGGAAAAGAT
GGTTTATTTTATCCCTGGTCTCTATTGACAGTTACATAGGATGTAGGCTT
TTGCGTATCAGTATCATTTACAAATCCCATTATTAGTTAGCCTCTGAAGA
GATCATCTGTAACTGTTCTTTTCATCACTGTCTTGCATTAACGTCCGCCA
GGCAGGCAGAAGAACAAACAGGCTTAAGCACCCCTATATGTATCTCTGAA
CAGCCCAACAGCCAGTGGTGTTGTGGGAAAATTTTTCTGGAGGGGCCAAA
GTCAATTTTTTAGAATGGCGCCTCCATAGACCTTTTTTTAAAGAGGCAGC
CATGTTGAATAATTATGTACTCCAGCATAAAAACAATGATACAGCCATGC
ATAGTTACTGTATGCATATTTTAAAATTATGTATGGCTGTATCATTGTTT
TTATGCTGGAGTACTATAATTATTCAACATGGCTGCCTCTTTAAAAAAAG
GTCTTTTTTCCAAAGTGACGCACCAACCCACCCACCATTTCGAAACTTTT
ACTAATTCATTTGCCTAGGCATAATGAGGAAAGAAATATTTAGTGGATAA
GAGTAGATATATCTTTGATAGATGGAAAAGGGAAAAACAGGCCCCACCAT
AAATCTGACACTTGCCAGAGTGAAAAGAAACAGTATTATAAATTGGTTTT
ACGCAGTTAGATTTTTATTTAATATAAATGCTATATTGTAGTATTGCACA
CAAAAAAACTTGTAAATGAGCTAGATTGTAAAGAAGTTACCAATGCAATG
AACTTTATTGCGAGCGAAGCAAGCGAAAAAAATTGCAAGTGATTTAAAAT
TATCCCAGTAAAAATGGTCTTGGGGCGCAGTTAAAGGCGCATAAAGTATG
ATTTTTAAGATTGGGGGCGTTTAAAAAAATCTCTTTTGGCAACCCTTACT
CTAAAGGCGCCCCCATCAGTGATTCTGACCTTCTTATTATTCCTAATTGA
AACTTCCAAATGTTCAAGAGATTCCTGACAACTCCAGATCAAAAAATAGA
AAATAAAAGATCTACTCTCACTTGTCATAATTCAAGAAGGTCAGTGTCCG
ATACCTGGACGCTAAAAAGTCATGAAAAATGGTCTGAGTACCTAAATAAA
AGAAGGTTGTGAAGTTGAAAAGTTTAGAAAGAAAAAAATGAAAATGGGTA
GGACATACTTATAGGAATTTTTTGAATTTGCTTTATCAAATTACTACCGT
GTCAATCTAAATTTAGAAAATATTACATCTTTACTCAAAATGGCCTCTGA
TGCAACTACTTTGTTTATTGGACGTTTGGGACCAGGTGTCACTGATAAAG
ATCTTTCTAACATTTTTGATAAATATGGAAGAACCGTCAGTAGTGAGTAT
TTTCATCCTCGTGAATTGTTACTAGGTTACCCAATCAATAGGATGATCTG
AATCAACTTTCATTTTCTACATCAACTGTCATCAATAACAGCTCTAGGCT
GCAATTTGAAAACTGTTGGTTTGTCGTCATCCGACTGACCCTAACTCAAA
ACCTGCCTACCCAAAAAAATTTATTGCCAATTTCAAAAAAGATTTCTTTC
TTCAAATCAGAACGTTTTGTCTGTCTTGTCCAATTTTAAGCTTTTAAGAA
TCGTGAATTCCTTTCTAGCTCTTCCGGTTTCATTTCAATATTATCTAAAT
GTAAGCTGAACTTTCATAAATCCTGAAAAACTTGGGTTGGGTGACAGCAA
ACCAACATTTTGAGTTCAAGTCCAGTCCTATTTATTTTACTTTGATCTTT
CTTTCAGCCACTATAATTGACGGAAAAGGTTTTGGGTTTGTTCAATTTGA
AACATCAACTGAAGCAAATGATGCAATCAATGGTGCTAATGGAGCAGTAA
GGGTTTTTTCTCTATTTTTATAATTCAGTATTGTCAGTGATTCAATGATC
GCTCACTTGTTTATAGGGAAAATTAACTTCTCTAGCAAAAGATATAGTTC
TTTTATGTTACCTGAAATCTAATCTTTTTAAAAGCAGCGCATGTTTGTTA
GGGGCTCTTGCTTTTAGTTGATAGAGAACTTCTAACTTTTTTAGTGCAAC
CATAAATTTTTATCCACAGATGGGTTAGTCAAGAGAAAGATATTATCAGA
AAGCTATTTTTGAGTGGAGTAAAACTATAAACAAACTTTTGAAAACATGT
GAGTGAAAATAATTTTAAAGAATCAATTAAAAAGATTTAACTTTTTATTG
GATTAAGCTGAAAACCCTATCTTTAGCCCTACTTTTACAGAAGGTTTCAT
ACAAAATAAGAAAGAGATTGAGAATGAAAGTGATATTTTTTCAATGTTAT
ACTATATTGTGTAGTACTTGGAAACAATAAAAGCATTACCTCAAAAAAAA
TGTTTAGTTCCCCTTTAAAAATCCTTGGGCAGTTCTAAGCTTTTATTTAA
AAAAAAATCCAAGAATTATTATTACATAGGCTTTCGTAGAATTTAGAAAG
AACAATGGAATAATAATTTAATATTTTTTTTTAGGAAGTGAAAGGCTCCC
AAATATCAGTTGAAATGGCTAGAGATAAGCAATCATCTTCATTCTCTGGT
GGTTTCAGAGGCCGTGGTAGAGGAATGAGAAGAGGAAGTGATGACGGTGG
TTATAGAGGAAGAGGATTTTCTTCCCGCGGAGGTGGATATTCTCGAGGTG
GGTATGGACGCTCAAGAGAATATGATTCAGACAGATCACATGGTGGACGT
GATAGTTATGAACCAAGAGGTAGAGGTCGTGCAAGAGGTGGTCCAAGAGG
AGCCCCCAGATTTGGAGGTGGTGATAGATATTCAACAGAGGACAGGTATG
GTGGAGGTGAAAGATCAGAGAGAAGACATAGTGACAGGTTTGAACGATAT
GAAGGAGGAAGTAGATATGAGGAAAGATATCAAGAAGAAGAAGATGGTTT
AGATGATCGTTATTCAAGAGGTGGTGAAAGAAGAGAACGAAGGGAATGGC
ATGAAGAAGAGTATGAAGAACCTAGAGAAAGAAGATCTTCATTCGGCCGT
GGAGGTAGTTCTAGAGGAAGCTATACTCCACGTGGTAGAGGAGATTTCAG
AAGTTCTGATCGTGGGCGATCTGAACGTGGAAGCTCGCGTGGTGGATTTG
CACGTGGTGGTAGTTTCAGCAGAGGTAGTGGGGATCGTGGTGGCTTTAGC
AGACGTGGAGGAGGTGACAGAGGAGGATATTCTAGTGGTTATGACCGACA
TGAAAGAGCTCCCAGAGAAAGCAATAGAGACTGGTATGGTGCTAGTGAGC
GACGAAGTGGAGGTGAAGACAGACATGGAAGTGGGGAACGATTTCAGAGA
CACAGAGATGAAGATGGAGGTGGCTATCGTGGAAGAGGAGCTGGTCGAGG
TGGATTTACACCAAGAGGAAGAGGACGTGGGCGTGGAGGGTTTTCAAGCA
GAGGAGGATCCCTTGGTGGTGGACGATCTTTCAGTGAAGACTATTAA Coding sequence (CDS) from alignment at sc0000252_pilon:185599..189095- >XLOC_035239 ID=XLOC_035239|Name=XLOC_035239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000252_pilon:185599..189095- (Clytia hemisphaerica_ch_hm2_pilon)
TTAACTGATCACCTTCGTTGTGCTGTTAACTGATCACCTTCGTTGTGCTG
AAAATATTACATCTTTACTCAAAATGGCCTCTGATGCAACTACTTTGTTT
ATTGGACGTTTGGGACCAGGTGTCACTGATAAAGATCTTTCTAACATTTT
TGATAAATATGGAAGAACCGTCAGTAAAAATATTACATCTTTACTCAAAA
TGGCCTCTGATGCAACTACTTTGTTTATTGGACGTTTGGGACCAGGTGTC
ACTGATAAAGATCTTTCTAACATTTTTGATAAATATGGAAGAACCGTCAG
TACCACTATAATTGACGGAAAAGGTTTTGGGTTTGTTCAATTTGAAACAT
CAACTGAAGCAAATGATGCAATCAATGGTGCTAATGGAGCACCACTATAA
TTGACGGAAAAGGTTTTGGGTTTGTTCAATTTGAAACATCAACTGAAGCA
AATGATGCAATCAATGGTGCTAATGGAGCAGAAGTGAAAGGCTCCCAAAT
ATCAGTTGAAATGGCTAGAGATAAGCAATCATCTTCATTCTCTGGTGGTT
TCAGAGGCCGTGGTAGAGGAATGAGAAGAGGAAGTGATGACGGTGGTTAT
AGAGGAAGAGGATTTTCTTCCCGCGGAGGTGGATATTCTCGAGGTGGGTA
TGGACGCTCAAGAGAATATGATTCAGACAGATCACATGGTGGACGTGATA
GTTATGAACCAAGAGGTAGAGGTCGTGCAAGAGGTGGTCCAAGAGGAGCC
CCCAGATTTGGAGGTGGTGATAGATATTCAACAGAGGACAGGTATGGTGG
AGGTGAAAGATCAGAGAGAAGACATAGTGACAGGTTTGAACGATATGAAG
GAGGAAGTAGATATGAGGAAAGATATCAAGAAGAAGAAGATGGTTTAGAT
GATCGTTATTCAAGAGGTGGTGAAAGAAGAGAACGAAGGGAATGGCATGA
AGAAGAGTATGAAGAACCTAGAGAAAGAAGATCTTCATTCGGCCGTGGAG
GTAGTTCTAGAGGAAGCTATACTCCACGTGGTAGAGGAGATTTCAGAAGT
TCTGATCGTGGGCGATCTGAACGTGGAAGCTCGCGTGGTGGATTTGCACG
TGGTGGTAGTTTCAGCAGAGGTAGTGGGGATCGTGGTGGCTTTAGCAGAC
GTGGAGGAGGTGACAGAGGAGGATATTCTAGTGGTTATGACCGACATGAA
AGAGCTCCCAGAGAAAGCAATAGAGACTGGTATGGTGCTAGTGAGCGACG
AAGTGGAGGAAGTGAAAGGCTCCCAAATATCAGTTGAAATGGCTAGAGAT
AAGCAATCATCTTCATTCTCTGGTGGTTTCAGAGGCCGTGGTAGAGGAAT
GAGAAGAGGAAGTGATGACGGTGGTTATAGAGGAAGAGGATTTTCTTCCC
GCGGAGGTGGATATTCTCGAGGTGGGTATGGACGCTCAAGAGAATATGAT
TCAGACAGATCACATGGTGGACGTGATAGTTATGAACCAAGAGGTAGAGG
TCGTGCAAGAGGTGGTCCAAGAGGAGCCCCCAGATTTGGAGGTGGTGATA
GATATTCAACAGAGGACAGGTATGGTGGAGGTGAAAGATCAGAGAGAAGA
CATAGTGACAGGTTTGAACGATATGAAGGAGGAAGTAGATATGAGGAAAG
ATATCAAGAAGAAGAAGATGGTTTAGATGATCGTTATTCAAGAGGTGGTG
AAAGAAGAGAACGAAGGGAATGGCATGAAGAAGAGTATGAAGAACCTAGA
GAAAGAAGATCTTCATTCGGCCGTGGAGGTAGTTCTAGAGGAAGCTATAC
TCCACGTGGTAGAGGAGATTTCAGAAGTTCTGATCGTGGGCGATCTGAAC
GTGGAAGCTCGCGTGGTGGATTTGCACGTGGTGGTAGTTTCAGCAGAGGT
AGTGGGGATCGTGGTGGCTTTAGCAGACGTGGAGGAGGTGACAGAGGAGG
ATATTCTAGTGGTTATGACCGACATGAAAGAGCTCCCAGAGAAAGCAATA
GAGACTGGTATGGTGCTAGTGAGCGACGAAGTGGAGATGAAGATGGAGGT
GGCTATCGTGGAAGAGGAGCTGGTCGAGGTGGATTTACACCAAGAGGAAG
AGGACGTGGGCGTGGAGGGTTTTCAAGCAGAGGAGGATCCCTTGGTGGTG
GACGATCTTTCAGTGAAGACTATTAAATGAAGATGGAGGTGGCTATCGTG
GAAGAGGAGCTGGTCGAGGTGGATTTACACCAAGAGGAAGAGGACGTGGG
CGTGGAGGGTTTTCAAGCAGAGGAGGATCCCTTGGTGGTGGACGATCTTT
CAGTGAAGACTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:185599..189095 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1158:139 |
| Aaloc | 241-1017:964 |
| Aaloc | 154-240:1689 |
| Aaloc | 28-150:2230 |
| Aaloc | 1-24:3498 |
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