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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:364264..368837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035229 ID=XLOC_035229|Name=XLOC_035229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4574bp|location=Sequence derived from alignment at sc0000011_pilon:364264..368837- (Clytia hemisphaerica_ch_hm2_pilon)
TATCTGATCCTTATTGCCATTCCATTAGCAATGATCATTTATGGTAAGTT
TACTTCATTTTGTTTTTCGCTTGTCCAATCATAGTCCAGGAGCCAAACCT
GAAAATGACATTTTGCCCCGCATTTTGCTTAGCCCAAGATTCTACAGGAT
AAACTTTTTTGGAATCCTCAACTATCCTAGTTTAAGAAATTCCTGTTCAA
TTTTTCATACTGGGTCTGAGTTTTTAGGGGGTACTTTTTACCCTTTGTAA
CGATTTGTTAAGAAAAAATCTTTCCATGTATGATATAATTTGCTTTATAA
TAAAAATAAATCGACCAATTGCCTTGAAACTTTGCCAAAAGTTTCAAGAT
AGATTGGTGATCATCATTGACAAAAATTTTTTGCGAAAAACTATTTTTGG
GGGTTTATCTGGGGGAAAATAGAATGAGGCACAAACTTTGTGTTATGATA
AATCTTAAATGCGATACACCCGAAAAATTTCTTGTCAACTGTATTTAGTA
TCATTTCGACGCTTCAGGGGGTAAAAATGCCCATTTTATTGAATTATTAT
TATTATTATTTTGTTGAAAGAATTGGATATTATTTGACTTTTCGAGGAAG
ACGCGCATGACGAAGTCGATGAAGAGGTTGAACAGAAATGGACTTTCAGG
ACCACCCTGACGTACGCCTGATGTAGTCGGAAATGTCTCTTTTTCAAATG
TTAGACTTGTGTCTGAGTACAACTTTTCGAGGATGTTGAGGATTTGGGGA
CAACGATTATCAGAGAAACGTAGTTTGATAGAGTCAAATAACCATTTTCT
GGGGATGTGGTCAAAAGCCGCGGTGAGATCCACAAAGAGGAGAAAAAGAG
GTTGTTTCTTGCGGTGAGTGATCTGTTGAACTCGTTTTATGGTATAGATA
CCATTGGTGGTACCCCTATCTTGGCGAAAACCATTTTGCTCCTCTGAAAG
CTGGGCTTCGTACCAAGGACGAAGGCTACCCAGAATGAGATTGATGACCA
ACTTACAAACAGTTGATCCGATGCTAAGTCCACGGTACTTTGTAGGGTCG
TTTTTGAATCCTTTACCTTTCCAAAGAGTACGGACTCGAGAGTTACCCCA
AGCGTGGGGTACGTCCAGGTTTTGCCAAAGGTTTGAGGTCATGCGATGCA
ATACTTCTAATATAATTGGGTGGTTCAGCTTTTTGAGAAACTCAGTATCA
ATGTCATTAGATGCTTTATTGGATTTAAGCATATCAAAAATTGTTGGACA
ACTGGTCACATCAAAGGGCACCGGTTTGAGGGCTGAGGTATATTTGAGTA
AATTGACAAAGCCCACCATGTTTGGGTCACGGAGAAAATTTTTGAATTTT
GAAGGGTTCAAAGTGCTATTTTAGGGCCCATTTCAATTCAATTTGAAAAA
ATAATTCATGTAAAAATAATGGAAATCTTTTAAAAGTACAAATAACATGA
GGGGCCATGCCCCCTGGTCCCCCGTTAACGGGACCCATGGAGGCGCAACC
ATGATTTGCGCCAACGTGAGAAATTTTCAATTTAGTATGGCTAAAATCGC
CCTCATTTACTCACTTTTTTCCAAAATATGGTTTAAACATCATAGGATTC
CTTTGGCCAATCTGCTTAAAATTACACCTCATACACTTTTTTTTTATAAG
AACCAGTAAATTTTTGCTGAGGCTCGAATGTTCTTATTTTGTTCTTATTT
TTTCTATGGTAAAAAACAAGTTTTGGATATTTACTTTACTATTTAGAGAA
TTTTAGAAACCAGTGATTCTTTTTGCTATAACTCTCTAACTTCAGCCTCT
CCACTGTTCTTAAATTGTTCTTATTTTTTGGCATTTTTGAGCCTCGCTGT
TCTGATAAAATTGTTCTTATAAAAAAAAGTGTAATAAACCTGTTGCTTCT
TTCTGTTTAAGGCTTTGCTACAAATGTATGTTTTCCTGAAATAAAGGACC
TGATGTCTTTGATGCATCTATAAGAATATAAGCATTTAAGAAAAAGAGGA
AAATGTTAGTTACGGAGGAAGCGCAAGTAGCTTGCCTCAAAATAACAAGT
TCTACTTAAAAACCGGCAGTAGTGACCGTTTCGGGAAGTAAAAGCTGATA
AAATTACGCTAAATCACTGTAACTATGTAGCCATAACTTCAGTTAAAAGC
ATCGAAATGTTGTGTAGTTGTCTTTAAAAGGACTAAGAAATGATTGAATG
ATAATTTAAAGTTTGTTAGAGCTGGTTTCCATCCTAAAAATTTACATAGC
TTTTTGAGGAAACTTCTCAAAAAGAAAAACATCCAAACTCAGGCAACTGC
GAACTAGAAATTGGGCATATTTACCCCCTGATTTGCCACCTGTATCCCTG
ATGCCAGATAATGAAAACCAATTGCTTTCATCTATTGAAAGAAAGTATCA
ATGTTTCCAGTAGTTAAAAATCAAATTTCGTACACCTTAATACTGTTTTA
TGGGTCCAATGGGCCCAAAAATCAATAAAAATATACTAAAATGGGCAATT
TTACCCCCTGGTTTCTCCAACTGCACCCTGTATGTGAAAGTTTCAAGTCA
GCATTGTAATTTTCTAGTGTATATTACACAAAGATCAAGTTAAAACTGTT
TTCGAAGATATTTTAAGCGAGATAAGCAGTGAAAATTGCTCAAATTATGT
AAAAATTCAATAAATTGGGCATTTTTACCCCCTGAAGTGTCGAAAATGAT
ACTAAATACAGTTGACAAGAAATTTTTCTCAAAAATAATTTTTCGCAAAA
GTTTTTTGCCAATGATGATCACCAATCTATCTTGAAACTTTTGACAAAGT
TTCAAAGCAGTTGGTCAAGTTGTTCATGAAATATAGCAAATTATATCATA
CATGGAAAGATATTTTCCTTAACAAATCCTTACATACAAATGGTAAAAAG
TACCCCCTAAGTTTGAGCCCAGTATGAAAAATTGACTAGGATAGTTGAGG
ATTCCAAAAATATATAGTTTATCCTGTAGAATCTTGGGTTAAGCAAAAGT
GCTTTTTTAAGGAGATTTGGCTCCTGGACTATGAAGGCTGCTTGCCATTT
AAATCCAAGATAATAGACGAAATTGATTTTGTCGCTTTGAAAACGTACTA
AACTTCAAATAACAGATAGAAAAAGTGTCTACTTTGAATACTTCCCCCCC
CCGGGAGGGGGGGGAGGCACTAATATGATCTGGCCTACGTCATGTGCCGC
GCTTAAGGGTGGGATTTTTCAGTGCACTGTAAGGGTGTGTTTCTGTGAGA
TTGCACTGCAAGGGTCGAATTTTAAAACAAATTCAAAATAATTGATAAAA
AGAAAGGTTTATACTTCTCGTTTGTTTGAAACAGAAAATTTCCCAAGCTT
CTTTTTTTCACGCAGATTTACAGCTGAAAAATATAGTGCACTATAAGGGT
TGGGTAAATCATGAGAAAATGCACTGAAAGGGTACCTTTTCAGCCATATT
GAATTGCACTGTAAAGGTACGATTTCGGGGTTGTGGATGGTGAGATTTGT
TCGTATTTTTGAAATTTGTCGTTTGTTTTTTATGTTGCGAAGTAGGCACT
TTCTCCCCGTCATAAATACATTTCTCTATGCAATGAAGAAAGTAAAAAAA
GTCTTGCTAGGACCATCTGCGAAACCTTACATATCTTTTCATACACAAAC
TCAAATACTGGATCAGAGATGCTTAGATCGAGAGATATGGCTAAAAAATG
CATAAAGGATGTTTATAATAAGCAAAATATTTTGGGAAATACGTCAAAAA
GCAAAAAACAGCCAAAATCGAAAAGTGTAGGACCCGAGGGGGGGGGGCTA
CTACCTTTGCCATCGGACGGGGGTGCTCTGCTGAGGTTCAAAAAATGGGC
CCTACGAGGAACTCGTTTTTTAAAAAGTTTTATCGAAATTTGCGAAAAAA
GTGACCCTGAATGGGAATGAAATTCCAAAATGTTCTAAATTTTTTCTACT
TTTTCTCAAAAGCGTATGCTTGCGTACAGCGTACATTGAGTTTCATGTAT
GAAATAAAGGTCCGAACCAAACGATTTGAATTTGAAATTTTCTTCAACCG
AAGGGGGCGGGGGGGGGGGTGCTGGTGAATGAAAAAGTACGTACCAGAGG
GGGGTATAGCCATTTGCGTACATGGGGGGGGAGGGGGTACTCGATTTTCG
ACATTTTAGTGCGTACGTACTATGTGGACGGCCCCTTGGGACTCGTGGTT
GAAAAAGGTACCCCTCCTTTTTTTCAGGTTTTGTTGGTTTGGGACATTGC
AGTGTTCAACCATTTATCCCGAAATTTATGATAACCAGTGGCTTCATATC
AGCCATATTTTTCTTTTTATTTCTTGTGGCATGGGCAACTGGTTCCAAAG
ATGGGTCTTCATGTGAGTATGCTGCAGTATTTGGCTTCGTAGTTCTTTTG
GGAATCCAAATAGCAGGAGCTCTTTATATATTTGATATTGATTCTTCGAA
AGTTATTGATGGAGTAAATTGCGACAAAGATTTGTACTGGTTCGCTTTTG
CATTACTTATAATATTTTTGGCATCATTTTTTGTGCTCGGCGTTATTTTT
ATTGCGTACATCAATAAAAACTAA Coding sequence (CDS) from alignment at sc0000011_pilon:364264..368837- >XLOC_035229 ID=XLOC_035229|Name=XLOC_035229|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000011_pilon:364264..368837- (Clytia hemisphaerica_ch_hm2_pilon)
TATCTGATCCTTATTGCCATTCCATTAGCAATGATCATTTATGTATCTGA
TCCTTATTGCCATTCCATTAGCAATGATCATTTATGGTTTTGTTGGTTTG
GGACATTGCAGTGTTCAACCATTTATCCCGAAATTTATGATAACCAGTGG
CTTCATATCAGCCATATTTTTCTTTTTATTTCTTGTGGCATGGGCAACTG
GTTCCAAAGATGGGTCTTCATGTGAGTATGCTGCAGTATTTGGCTTCGTA
GTTCTTTTGGGAATCCAAATAGCAGGAGCTCTTTATATATTTGATATTGA
TTCTTCGAAAGTTATTGATGGAGTAAATTGCGACAAAGATTTGTACTGGT
TCGCTTTTGCATTACTTATAATATTTTTGGCATCATTTTTTGTGCTCGGC
GTTATTTTTATTGCGTACATCAATAAAAACTAAGTTTTGTTGGTTTGGGA
CATTGCAGTGTTCAACCATTTATCCCGAAATTTATGATAACCAGTGGCTT
CATATCAGCCATATTTTTCTTTTTATTTCTTGTGGCATGGGCAACTGGTT
CCAAAGATGGGTCTTCATGTGAGTATGCTGCAGTATTTGGCTTCGTAGTT
CTTTTGGGAATCCAAATAGCAGGAGCTCTTTATATATTTGATATTGATTC
TTCGAAAGTTATTGATGGAGTAAATTGCGACAAAGATTTGTACTGGTTCG
CTTTTGCATTACTTATAATATTTTTGGCATCATTTTTTGTGCTCGGCGTT
ATTTTTATTGCGTACATCAATAAAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:364264..368837 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 46-390:346 |
| Aaloc | 1-42:4575 |
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