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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:572925..575252- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035221 ID=XLOC_035221|Name=XLOC_035221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2328bp|location=Sequence derived from alignment at sc0000011_pilon:572925..575252- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTCAATTTGAGTTGAATTTTGATGATGTTTTCGAGGGTACTGA
TCATATCAAAAATGAAGACCATATTATAGAAGATACAACATTTGCTGAAG
AAACATTGAATATTTCTAATGAAGAAATCAAAATTAAGGAACCTCCCTTG
AGTCTTTATGATATTAGGAAAGATGAGGATGAGGAGGATCAAAGTTCTTT
AGATTTGAAACCTGACGTTGATATAGCTTTAAAGCCAGAAGAAAACGATG
ATACAAGTATGGGAATGCAAGACTCTTCAATAAATGAACAAATATGTCAA
TCAGTGAATGATGTTTCGGAGATGGCAAATCCATTCTTATCGGCAGACAA
AAACAATGAAGTGGTCATTAAAAAGGAACCAATTGAAGATGAATTTATAG
ACAATAAGGAGCCACCACTTCTAGAGAATATCAAAGAAGAAGTTAATTGG
GAAGAAGGTATATTGCTTTTTTTTCTCTGTCTGAAAATTCGTTGATTTCT
TTTATGGCTTTGATAGCTTGATCCCTTCTGTTTTCTTTTTTTTTTATATT
TTTGATCCTTCTTACTGAGGTTTTGATCATAGTATCATAGTATGTCACTC
TAAATGATAAGTTTTACATCATTAATGAACAATAAAAAAACTTTGTATTC
TTATCGTTTGAATAGTATTTGTAAAACAGTCAGTTTTGAGACTTTACATT
TGTAGGTGGTCCAAAATGAGGGTCATCAGCTTATTTTTATCTAACTCACG
TGCACTCACTTATTAGAATCTTGAAACAAAAATGAAATATTTCCAATAAG
GGGCCACTCACATATCAATGCTTCCCAAGTACTTCCTGAAACCAACCAGT
CAAAAATTGTTTAATTTCTAGGTTATGGTGTCGACTCCAGTGCTGCCTCC
TCTTCGACTGGTGCTGCAAACTTCAATAGGAAGTCATTAAAGAAGTTAAA
TGTGCAACAAAGGCAAGATATTAATAACAAGTCCGCCACAAAAGATTATT
ACATTTATGTGAATCCAAGAGGAAAACTGAAGAAACGAAAAAAATGGAAG
TTTGATGTTAATGTTGCTGTAGAGTTTATCGATTTGAAATCCATTGAAGA
TATGAAAAGGGATCCTGAAAAGTGGAAAGGTGTGATGAAAACAAAAGTTG
AACGGAATAAGAAAGAAAAACAGAAATTGAATGTTGTGAAGAAGAAGAAA
AAGAAAGAAAAGAAAGATAAGAAAAAGAAAAAATCACCTAATATTGAAAC
TGCAGAAATCAACATTAAAGTTGAACCTTCATCCACGGTAATAAAGCAAG
AACCACAAGATGACATTGGAACGCAAAAACCCAAGCGGAAAAATCCTCAC
AGACCAGTTCCACGTGTTAGATGCAAATATTGCAATTTGTTATTTTCTTC
ACAAAGCTACCTCACAGTGCATGAGCGTATTCATACAGGTGAAAAGCCTT
ACGAATGTGATGTCTGCCATAAAAAGTTCAATTCAAGACATTCATTGAAT
CTACACAAGAAAAGCCATTCAAATGAGCGTAAATTTGAATGTGAAGTCTG
TCACATTTTATTGAAAAATAAATTGACCTACAATGAGCATCTTAATATCC
ATACAGGGGCGAAACCATACAAATGTGAGACTTGTGGAAAGCGTTTCGCA
CAGTCTAGTGTTTATCGTTTACACATCAAGATCCATACGGGAATCAAACA
GTTCAAATGTGAATATTGCGATAAATCTTTCCGGCAAAAGATAACAATGC
AGAACCATGTTTACGCTATACATACTCATGAAAAACCATTCCCATGCACT
TTATGTGAGAAGAAATTTCATAGAAGCGATGCTTTGTTAATGCACATGCG
AATGCATCAAGATATCAAGTTATGGCAATGTAAAATTTGTGCTTTGAAAT
TTCGCACCACTTCTTGCTTGAACCGACACATGACAACTCATACCAAGCAG
AAACGCTTCAAATGTGATAAATGTGACTTTGAAGCAGCCCGCAAAGATAG
TCTTGCTACACATTACCGAACACACACAGGAGAGAGGCCATACAAATGTG
AACTCTGTGAAATGACTTTTGCTACTTTAAGCACACGTAAACTTCATATG
AGACGCCATACTGGTGAAAAACCGCATGAATGCCCTGTTTGCAAGTATCG
CTTCACCGAAAGCAGTGGTCTCAGGAGACATTTACGGAGAATGCATTTAC
GTTATTTTGAAGAAATGGAGGAGAAACGTATACGAAAGAAAGAAAGACTT
GAAAAAACTATTGAAAACAACCTTGCACGAATCCAAGAAGAAGCGATAAA
AGAAAGTGAAAAAGAAAGTGGTCAATAA Coding sequence (CDS) from alignment at sc0000011_pilon:572925..575252- >XLOC_035221 ID=XLOC_035221|Name=XLOC_035221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3828bp|location=Sequence derived from alignment at sc0000011_pilon:572925..575252- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTCAATTTGAGTTGAATTTTGATGATGTTTTCGAGGGTACTGA
TCATATCAAAAATGAAGACCATATTATAGAAGATACAACATTTGCTGAAG
AAACATTGAATATTTCTAATGAAGAAATCAAAATTAAGGAACCTCCCTTG
AGTCTTTATGATATTAGGAAAGATGAGGATGAGGAGGATCAAAGTTCTTT
AGATTTGAAACCTGACGTTGATATAGCTTTAAAGCCAGAAGAAAACGATG
ATACAAGTATGGGAATGCAAGACTCTTCAATAAATGAACAAATATGTCAA
TCAGTGAATGATGTTTCGGAGATGGCAAATCCATTCTTATCGGCAGACAA
AAACAATGAAGTGGTCATTAAAAAGGAACCAATTGAAGATGAATTTATAG
ACAATAAGGAGCCACCACTTCTAGAGAATATCAAAGAAGAAGTTAATTGG
GAAGAAGATGGATTTTCAATTTGAGTTGAATTTTGATGATGTTTTCGAGG
GTACTGATCATATCAAAAATGAAGACCATATTATAGAAGATACAACATTT
GCTGAAGAAACATTGAATATTTCTAATGAAGAAATCAAAATTAAGGAACC
TCCCTTGAGTCTTTATGATATTAGGAAAGATGAGGATGAGGAGGATCAAA
GTTCTTTAGATTTGAAACCTGACGTTGATATAGCTTTAAAGCCAGAAGAA
AACGATGATACAAGTATGGGAATGCAAGACTCTTCAATAAATGAACAAAT
ATGTCAATCAGTGAATGATGTTTCGGAGATGGCAAATCCATTCTTATCGG
CAGACAAAAACAATGAAGTGGTCATTAAAAAGGAACCAATTGAAGATGAA
TTTATAGACAATAAGGAGCCACCACTTCTAGAGAATATCAAAGAAGAAGT
TAATTGGGAAGAAGGTTATGGTGTCGACTCCAGTGCTGCCTCCTCTTCGA
CTGGTGCTGCAAACTTCAATAGGAAGTCATTAAAGAAGTTAAATGTGCAA
CAAAGGCAAGATATTAATAACAAGTCCGCCACAAAAGATTATTACATTTA
TGTGAATCCAAGAGGAAAACTGAAGAAACGAAAAAAATGGAAGTTTGATG
TTAATGTTGCTGTAGAGTTTATCGATTTGAAATCCATTGAAGATATGAAA
AGGGATCCTGAAAAGTGGAAAGGTGTGATGAAAACAAAAGTTGAACGGAA
TAAGAAAGAAAAACAGAAATTGAATGTTGTGAAGAAGAAGAAAAAGAAAG
AAAAGAAAGATAAGAAAAAGAAAAAATCACCTAATATTGAAACTGCAGAA
ATCAACATTAAAGTTGAACCTTCATCCACGGTAATAAAGCAAGAACCACA
AGATGACATTGGAACGCAAAAACCCAAGCGGAAAAATCCTCACAGACCAG
TTCCACGTGTTAGATGCAAATATTGCAATTTGTTATTTTCTTCACAAAGC
TACCTCACAGTGCATGAGCGTATTCATACAGGTGAAAAGCCTTACGAATG
TGATGTCTGCCATAAAAAGTTCAATTCAAGACATTCATTGAATCTACACA
AGAAAAGCCATTCAAATGAGCGTAAATTTGAATGTGAAGTCTGTCACATT
TTATTGAAAAATAAATTGACCTACAATGAGCATCTTAATATCCATACAGG
GGCGAAACCATACAAATGTGAGACTTGTGGAAAGCGTTTCGCACAGTCTA
GTGTTTATCGTTTACACATCAAGATCCATACGGGAATCAAACAGTTCAAA
TGTGAATATTGCGATAAATCTTTCCGGCAAAAGATAACAATGCAGAACCA
TGTTTACGCTATACATACTCATGAAAAACCATTCCCATGCACTTTATGTG
AGAAGAAATTTCATAGAAGCGATGCTTTGTTAATGCACATGCGAATGCAT
CAAGATATCAAGTTATGGCAATGTAAAATTTGTGCTTTGAAATTTCGCAC
CACTTCTTGCTTGAACCGACACATGACAACTCATACCAAGCAGAAACGCT
TCAAATGTGATAAATGTGACTTTGAAGCAGCCCGCAAAGATAGTCTTGCT
ACACATTACCGAACACACACAGGAGAGAGGCCATACAAATGTGAACTCTG
TGAAATGACTTTTGCTACTTTAAGCACACGTAAACTTCATATGAGACGCC
ATACTGGTGAAAAACCGCATGAATGCCCTGTTTGCAAGTATCGCTTCACC
GAAAGCAGTGGTCTCAGGAGACATTTACGGAGAATGCATTTACGTTATTT
TGAAGAAATGGAGGAGAAACGTATACGAAAGAAAGAAAGACTTGAAAAAA
CTATTGAAAACAACCTTGCACGAATCCAAGAAGAAGCGATAAAAGAAAGT
GAAAAAGAAAGTGGTCAATAAGTTATGGTGTCGACTCCAGTGCTGCCTCC
TCTTCGACTGGTGCTGCAAACTTCAATAGGAAGTCATTAAAGAAGTTAAA
TGTGCAACAAAGGCAAGATATTAATAACAAGTCCGCCACAAAAGATTATT
ACATTTATGTGAATCCAAGAGGAAAACTGAAGAAACGAAAAAAATGGAAG
TTTGATGTTAATGTTGCTGTAGAGTTTATCGATTTGAAATCCATTGAAGA
TATGAAAAGGGATCCTGAAAAGTGGAAAGGTGTGATGAAAACAAAAGTTG
AACGGAATAAGAAAGAAAAACAGAAATTGAATGTTGTGAAGAAGAAGAAA
AAGAAAGAAAAGAAAGATAAGAAAAAGAAAAAATCACCTAATATTGAAAC
TGCAGAAATCAACATTAAAGTTGAACCTTCATCCACGGTAATAAAGCAAG
AACCACAAGATGACATTGGAACGCAAAAACCCAAGCGGAAAAATCCTCAC
AGACCAGTTCCACGTGTTAGATGCAAATATTGCAATTTGTTATTTTCTTC
ACAAAGCTACCTCACAGTGCATGAGCGTATTCATACAGGTGAAAAGCCTT
ACGAATGTGATGTCTGCCATAAAAAGTTCAATTCAAGACATTCATTGAAT
CTACACAAGAAAAGCCATTCAAATGAGCGTAAATTTGAATGTGAAGTCTG
TCACATTTTATTGAAAAATAAATTGACCTACAATGAGCATCTTAATATCC
ATACAGGGGCGAAACCATACAAATGTGAGACTTGTGGAAAGCGTTTCGCA
CAGTCTAGTGTTTATCGTTTACACATCAAGATCCATACGGGAATCAAACA
GTTCAAATGTGAATATTGCGATAAATCTTTCCGGCAAAAGATAACAATGC
AGAACCATGTTTACGCTATACATACTCATGAAAAACCATTCCCATGCACT
TTATGTGAGAAGAAATTTCATAGAAGCGATGCTTTGTTAATGCACATGCG
AATGCATCAAGATATCAAGTTATGGCAATGTAAAATTTGTGCTTTGAAAT
TTCGCACCACTTCTTGCTTGAACCGACACATGACAACTCATACCAAGCAG
AAACGCTTCAAATGTGATAAATGTGACTTTGAAGCAGCCCGCAAAGATAG
TCTTGCTACACATTACCGAACACACACAGGAGAGAGGCCATACAAATGTG
AACTCTGTGAAATGACTTTTGCTACTTTAAGCACACGTAAACTTCATATG
AGACGCCATACTGGTGAAAAACCGCATGAATGCCCTGTTTGCAAGTATCG
CTTCACCGAAAGCAGTGGTCTCAGGAGACATTTACGGAGAATGCATTTAC
GTTATTTTGAAGAAATGGAGGAGAAACGTATACGAAAGAAAGAAAGACTT
GAAAAAACTATTGAAAACAACCTTGCACGAATCCAAGAAGAAGCGATAAA
AGAAAGTGAAAAAGAAAGTGGTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:572925..575252 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 805-1923:1120 |
| Aaloc | 460-795:1456 |
| Aaloc | 1-456:2329 |
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