|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:197217..200277+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035216 ID=XLOC_035216|Name=XLOC_035216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3061bp|location=Sequence derived from alignment at sc0000252_pilon:197217..200277+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGAATATGGGCAGGTGAAACTTggcaaattgaaattgaaaggagg
agagaaaagtaaaaagaaaagtaagaaaaataaacgaaaacaTGATGAAG
AAGGAGGTGAATCTTCATCAAGTACGAAGGCTTGGAATGAGGAGACCAAA
AAGTATCATGGCTGGTGGCCTTTAAAGACTTTTGAGGATCTTGGTTGTGG
TATTGTAGCTGTACAGACAAGTTTCAAGAACTCGTATATTTTTGCAGTAG
ACAATGGAACTTTGAGATTAGGATCTGAGCATGATGATCATTTAGAAGCC
ATACCAATGGAAGAAGAAATCTTCACTTTGATCAAAAtctctgaaaataa
aattgccTTCAAATCAGGATAtggtaattattatttttatttttattttt
gctgacgACAGGGAGGCAATTTTTTGAAGGAGGAGCTGTTTTGATTATAG
CGACGACTAAAAGATATAAGTAAACGGATACAGGTCTTGAGAATTTCGGT
TGGTAATAGGTCATTGAAAGCCTGTTGTTAGATCTTCTGAAGAAAAGGAT
TTGAATTGTTTATAATTATTAGGATTATCGGtaaaatactaataatacta
ataatcatataataaactaatataataatGTTCTTTAGTTGTGatTtatt
ttctgtttttgtttaatttgagaGTATGGATGATTGCTGTGACAAATTCA
ACCTTTGGGAAGTTTGATGTctaaaatatgtgtctgatggCCGAATTTTC
TTATataatcaatattttaaaatgatatGCTTGGACTTACTTTTCCAGGT
AAATACGTATCAGTGAACGCTCGAGGGGATGTTATGGCTCGTTCAGAAGC
AGTTGGACCTCAAGAACAAATAGAGGTTGTGATAGAGAATGAGAAAATCG
CATTACAAGGGCACAACGGTTATTTCATTACTATTAATGACGAAGGAGAC
TTCAAAGCTCTCAGTCGAACCGCCaaagataaagaaattttcatcttgAG
ATCAAACGTTTCACGAAAGTACGGGTttccttatttttacttttttttaa
ttctcaagAGTTTGTTATTATCCTTGAACGGCTTTGTTGCTTGCTATAAT
GGTTTAATCTTGTTTTACGAGAGCTTATCTTTAATGTTCTTTAATCAtga
tttattttctgtttttgtttaatTTGGGAGTATGGATGATTGCTGTGACG
AATTCACTAGCtacaggccatttttcatgcccttttagcgtcCGGTCATT
GGACCCTACCCCGCTTAAAgtcactaaaattttggtaaaaacagccatTT
AAGTGGAAAAACACAAGagaaagtgccctttttggccaccaacggacact
gccctgcctttctaaaatatggcctgagCTACCTGTTAGTTATATTAGGG
AAAAGCTGACGACCCTGGCCATCTCTACATACGAGACTTCACCGCAAACT
AACtccaaaaaactttctttcctaTACAAACACTTTTGATtaatttcttt
aactcgaacctctataactcgaatgtctccttaactcgaacaagttttat
ggtccctcaGTTAACAGCGCCTTATAAACCTAActcaaattttcttaatt
tgtattcaccgtgcgtgttcgagttatgacgAGTAATGAGACTTCACTGT
ATttccatttcatttttgtttcagcaaaaagaagaagacgttaaacgaag
aagaagaagcgGGTGACGTACGTCAATTCGAAATCAATTACGTCAAACAG
TTCCAAAGCTTCAAAAATAATAGACTTAAACTACACGAGGGACCGTCCTC
ATCATTAGAGAAAGCACGAAATAAAGGGAAACTTCACGAAGCAATGCTGG
ATCGAAGGGAGAAAATGAAAGCGGATCGGTATTGCAAATAATGAGAGtgg
atttgaaatattttctattgCCGATATGAGAGACAGTTATTTCAGTCTGA
ACCTTGTGCTTCAAATACTCTTGGTGGAGACACTGTTTCGACATTAATGT
TGATCTTGGCATCCGCCAGCCGTCTTTTGGTTCAAATGATCAATTTGTGT
GCTGCTGATAtgaacttttttaaagaaagtcgGTGACAATTCAGACAAAT
TTTTAGCAGAGAGTCTCGATAAAAGAACTGTTTATATGGTTTTGTGTTAT
GAATTATGTAGCTAAAACATACTTTTTAACCTTTCTAAGACCAATGAGAT
CAAATTTTAGGCTCTTAAAATGTATATGGTAGCAATAATTATATTGAAAC
GAAATCCAGGATCGAAATTATTTCTTTCGTGTGCACTTAGTTTGATTGCC
ATCATTTGCTCTTTCAATAGCGTGATAATACTGATGTCTTGTTCATAAAA
TCATGCtcaatgaaataaaaacaaaatcaaaatcgaacTGAATTATtaaa
tgcattttttgaaagtttcataattttgaaaatatttacttgacattttg
tggttatttattttaaaaaatcatgaTTTATTTGACCTCTAAacgattag
ctatcgattttGTCACCATATCAACGTAGGAAACAAATCTTTCGGCTACC
GTAtttttttACTCACGCCATTTTTACAGTTCCTATGGTAATTTTGAATT
CACGCATAGAAAGGTCATTGATATATTGAAACCAGTTGAATGGATCTATT
GAAATTCATCAATTTTCTATTGATGACGTTGCAAATGAAGATTCATTTTC
AATCTCACTATGACGATGAAGCGAATGAAACTAACAAACCCCTAGGAACa
taatatttttctgttttctcaaaaatcgaaagagtaaaaaaaagtttaga
aaactATTTTGTTCAGTTTAACTTTTTCTTATACTCTAGTAAGACGTCAT
TTTGCAAGGAGCTTCAAGAAAAAAGGTGAACTTCATTTTTGCAAATGCAA
CATATTTTAACACCTTTTCGACTTTTAATACAATAAACAGTAATCAGACA
AAGTCAAGTCGTTTTCTAATGTCTTATTTACTAGATATTTAAATTGTCTT
TCGTTAAGACAAGAACGTTGAAGAAGACCTAAGAAAAGACAACCGAAGGC
AACACAGATAA Coding sequence (CDS) from alignment at sc0000252_pilon:197217..200277+ >XLOC_035216 ID=XLOC_035216|Name=XLOC_035216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000252_pilon:197217..200277+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGAATATGGGCAGGTGAAACTTggcaaattgaaattgaaaggagg
agagaaaagtaaaaagaaaagtaagaaaaataaacgaaaacaTGATGAAG
AAGGAGGTGAATCTTCATCAAGTACGAAGGCTTGGAATGAGGAGACCAAA
AAGTATCATGGCTGGTGGCCTTTAAAGACTTTTGAGGATCTTGGTTGTGG
TATTGTAGCTGTACAGACAAGTTTCAAGAACTCGTATATTTTTGCAGTAG
ACAATGGAACTTTGAGATTAGGATCTGAGCATGATGATCATTTAGAAGCC
ATACCAATGGAAGAAGAAATCTTCACTTTGATCAAAAtctctgaaaataa
aattgccTTCAAATCAGGATAtgATGTCAGAATATGGGCAGGTGAAACTT
ggcaaattgaaattgaaaggaggagagaaaagtaaaaagaaaagtaagaa
aaataaacgaaaacaTGATGAAGAAGGAGGTGAATCTTCATCAAGTACGA
AGGCTTGGAATGAGGAGACCAAAAAGTATCATGGCTGGTGGCCTTTAAAG
ACTTTTGAGGATCTTGGTTGTGGTATTGTAGCTGTACAGACAAGTTTCAA
GAACTCGTATATTTTTGCAGTAGACAATGGAACTTTGAGATTAGGATCTG
AGCATGATGATCATTTAGAAGCCATACCAATGGAAGAAGAAATCTTCACT
TTGATCAAAAtctctgaaaataaaattgccTTCAAATCAGGATAtgGTAA
ATACGTATCAGTGAACGCTCGAGGGGATGTTATGGCTCGTTCAGAAGCAG
TTGGACCTCAAGAACAAATAGAGGTTGTGATAGAGAATGAGAAAATCGCA
TTACAAGGGCACAACGGTTATTTCATTACTATTAATGACGAAGGAGACTT
CAAAGCTCTCAGTCGAACCGCCaaagataaagaaattttcatcttgAGAT
CAAACGTTTCACGAAAGTAAATACGTATCAGTGAACGCTCGAGGGGATGT
TATGGCTCGTTCAGAAGCAGTTGGACCTCAAGAACAAATAGAGGTTGTGA
TAGAGAATGAGAAAATCGCATTACAAGGGCACAACGGTTATTTCATTACT
ATTAATGACGAAGGAGACTTCAAAGCTCTCAGTCGAACCGCCaaagataa
agaaattttcatcttgAGATCAAACGTTTCACGAAAcaaaaagaagaaga
cgttaaacgaagaagaagaagcgGGTGACGTACGTCAATTCGAAATCAAT
TACGTCAAACAGTTCCAAAGCTTCAAAAATAATAGACTTAAACTACACGA
GGGACCGTCCTCATCATTAGAGAAAGCACGAAATAAAGGGAAACTTCACG
AAGCAATGCTGGATCGAAGGGAGAAAATGAAAGCGGATCGGTcaaaaaga
agaagacgttaaacgaagaagaagaagcgGGTGACGTACGTCAATTCGAA
ATCAATTACGTCAAACAGTTCCAAAGCTTCAAAAATAATAGACTTAAACT
ACACGAGGGACCGTCCTCATCATTAGAGAAAGCACGAAATAAAGGGAAAC
TTCACGAAGCAATGCTGGATCGAAGGGAGAAAATGAAAGCGGATCGGTAC
AAGAACGTTGAAGAAGACCTAAGAAAAGACAACCGAAGGCAACACAGATA
AACAAGAACGTTGAAGAAGACCTAAGAAAAGACAACCGAAGGCAACACAG
ATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:197217..200277 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 802-852:3011 |
| Aaloc | 595-798:1676 |
| Aaloc | 376-591:801 |
| Aaloc | 1-372:1 |
|
