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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:157925..162544+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035213 ID=XLOC_035213|Name=XLOC_035213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4620bp|location=Sequence derived from alignment at sc0000252_pilon:157925..162544+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAAGGTCAAAGAGGAGTCCAAGACCCAGGGGGCATTCCCTGAGCCACAA
CTCAGTGGATTCCGACTGTGCATCAAGCGCGCTTTCATTCAATAAACAAA
ATTCTTTCGAAAGTGAAGGTGGTGGTGGATGTGTTGGATGTGAAGATCTT
TTAGAATCAAAGCAGAAGAATACATGTGATCGTCAAGGAATTACAGTAGA
AGAAAGCAGATCCGAAAGGAGCTTGAAAAAGAAAGGTGAAACTTTTGATA
TGAAATCTAAAAAGACTTTAGTTGCGTTGTCAAGAGAAGAGGCATTTTCT
GAAGTGCAAACATCCCAACGAAAAAGTGTCAGGACAGTTACCACAACAAG
CaatacaaattatatttccaaaaaagaaaatatatctgAAGTGGTATTAA
ATGGAAGTTATCAAGTAGCAAAGACCAGTACACCTATTGAAAAGCAAACA
AGAACCAAATCAAAGGTAGAGTGTACGCCAATCAATAATGGGTTTTATGA
AAATTCTTCCCACGTTTCTTCCCTTGAAAAATCAGCAAAATCAAGCAgcc
aaaaacaaacattttttcagAGCAAGTTAAAGAAAACTTCAACTTGTGCT
TCTCAGAAACAGACtgtatttttaaattcattagAGGATCATGTGTTTCA
TGACACTTCTTACAAAAAAGTTGCattgtttgaaaatgatgaaCAAGAGG
AAGAACAACAGATGGTTTCAAGGACACCGCAATCCCTTGATAACAGCTTC
CATTATCTATACAAACTTAATGGTTCATCTTTGAATGATTACAGTGATCT
ATCAGAAGATGAGAATCTCTTCGAAAATAAGGTGCAACAAAATGTTAGCG
TCAACCATCAAAGGAGGAGTTTATTTCGTCAAAAACGAAGAGATTGGTAC
TTAAACCGAAGAAATTTTTCCACACAtataaacacaaataaaaagttttt
catatTAACCCTTGTCACAACATATATTTTGACATTATGGAAAAAACTGA
CACATTTAGCTCTTTTGAGAAGGACATTATTCATGATAACGAGGCTCTAC
TCTCGGTTTTCCATCCTTTCTATTGTCCATAGCCTTATCAGAAAATTGGA
ATTATATGCAAGTAGTGTAGTGgtatttttcttgaattatGCATCCAGGG
CAGTATTAGTTATCTACGAATGTGTGAAATGGTTATTTATGAAATTATTG
TCTTGTTTCACTGGCTTTGCTTCATTATTTACTgctgtcaaaaatgaaaa
attgtcaCAAAAGTCATTTGCTTTGTGCAGTTATGTTTGTACCAAAACAA
CATCATTTTGGTCAATGGTGAAGAAAAGGTAtacatttcattatttttta
agatGTTACACTTCTGATAAGACAACCCAGATAACAGTATAATGTAATTA
ATGTAcacgttttatttataagaatatccaaaatttttgaatccttcaga
tgttcttaactttttgagttttaagcataaaaatgttcttatgttcttat
tttcaccatttttgagcatttttgtctatttccctaagaaattggatgtt
tcagagtctgcaaagccttaaaatgttcttaacttgttcttaacattttg
ggcatcaaagccttatgttcttatatagtttgttcttatggacatgtttt
tttttcatgtttttcttataaagaaattgtCAAACTGTTAGGAGATTATT
TTacgtcaaaaacaaaaatgaaggtcaaaggataaaaatttttttataaa
catttaatatttcacaataaaattatttttaaagctactttttcttctta
ttattttattaaaaccAACAAGAATGATTTATTCACCTGCCTTTACTTTA
ATTCCAAGTCTTTATTGAGagtttcaataggaattttctttttcatgttt
tcttttatttctttagaTGTCTAATCTTGTTGGGATTCATTGAAGAAACA
AAAGATGAAATAgtggtttttatttttggtgGAACCAACTGCTGTGTCAG
CATTTTGCTCATCATCTTGACCCTCCCTTTCCTCTTACTCTTCCTCACCC
TTTTCTCACAaggtaatttttgttaaaattttttcttagtactttcaaaa
taatattttattcaaattcttaaaCTCTACTAGAAAGGGAACCCAAACAT
AtactatatttttcaagttgttgtttttgctgatttcaaacTATAATACC
TTGATCactattgtattattttttcatcagtttttattttccttttgttt
CTCTTGTAGTATCAAAGATCGTCATCCCTGACCCCAGCAGTTTATCTGTG
TCCAAGTCACAGACTATCTTCCTTGGAACCTCAGGCAACACCATCCCTGC
ATGGCACTTCCTGCCACCATCAGCAGAAATTCTTCCtccttcaaaaactt
tcaatgatGAATCCCCTGTTACACTGTATCTTCGAGAAGGGAATGATTTG
AACTCTGATTTgcaattgaatattttcaaaacattggtGTCATTGGGCTA
TCACGTTATTGTACCAGTCAATGTTTTGAACGAGGCGGAGGTGTCAATAG
CTTGGTCATGGGTCaaagaaaaagctttttcaTCTTCAGCATATCTTTGG
GGAGACCATATCGACTCGAGGTTTGTATGGGTTTTTTAACTGATGTGCTT
TGAATAGTAACTGTTTATCATTCAATTTGTAATCTTTCAATAAAAGTGTC
TGTAATATCTCAGCATATCTTCATGGAGCTGTCTGAATTTGAAttcttga
ttgattgattcgaCTTGTTAAAGTTTCGTAATTTAATTTGCTCTACTTTA
TTTTTAAAGCTCTTTTTCAATCAATAAAACCTCAGTTCTCAAAAATAGAG
TTTTCAGCTAACCACTAAAGCCTTCGTTCACAGAAAGAATTTGAAATCAG
TCTGACCTACTTATCCTCTTTTCTTACAAGACACccttttaaaatatctt
tacGTTAAAATTGTCATGGTAATTTAATTATAATTGGTTGCCATGCCAAT
GGATGACCACATTTTAATTCCTAGGAGTGGTTTTAATAATAGCTTATTTC
CAAAGCTCTCTATGCCTTTAGACTTGACATGAAAAGGTGACACTCGTATA
AACAAGTATGTATTTCTTTGCACAGACAAATCCCCTAGAAACTATTCATA
AAATGTagaaaaatggattttatttgcaaaaagaTTGACATGTGATAAAA
ATGTCGAATTAAGGAGCTTGTGACAGTTTAGATAAATGTTTGAGATATAT
ATTTTGTTGCTATATCTCTATCTACAGCACGCTGACGGGATATGCAAAAG
ATTTCTGCACACAACGTAAGTGAACAGTTCGTCTCTGTTTCGAACTATTT
TCATTGGTAGTATACATAATTCATCCCTCGtcaatttttaatgattttct
ctCTCTTTGTATATATATATGTCAAAAACTTAatttattgattttgaaaa
cCACAGTTCCCTGTGTGATTGTCGTTACTGAATACCGAGAGCGTCAagtt
attcacatattttaaatTTCCGAGTTTTTATTCTCGGTTTTAATCGGCTT
TCAACCGTTTTATATTCTacgttaaaaattaatgatttcCTTTAAAGTGT
TTCTTAATTCTTATCTCTCGTAAGTTTAAAGATGGGTCTGCAAGGCaagt
aaaaagttaaaaagtcaaGTCCCTGCTCTTGTTGTTTCACTACTTTCATC
GATTTAGCATGCTTAACCTTCCACTTTTTAGGGATTCCCCCAGATGGAGT
GATCATTGAAACTGAACACCAAAGTTCTCAAAATTCTGTACGTATCTTTA
ATCGAtttgtttctatttttcatgTGGTCGTTTTTCAAACGGTTAACTCT
TTTAATATACATTaaggccggtgtccactttcgCACGAAGCGCGCGAAAC
TTTTCACGTTATTTGTAACgtcattggttgattgaaaaaagaagcaattt
cattggtcaaaattgacgtaacggttgaaaaaagttgaacttccctcaac
tttttttttgttcgcgcgaaacttttttatgtcgTAATCTTTTCTCCAGG
CAAAAACGGTTAAGAAAATTCTTTCGCGCGCTTCTCACGAAAGTGGACAT
CAGCCTTTAGGGTTTATAataattttaaggttttttatgTGCTGAGACTG
GCTGAGATGTCGTAGACCAAACCTTTAGGAGTTGGGACAAAGCAATGCAA
AAAGCTCCTGATGGTGGTGggacaaatgaaaaaaagtttaaaagttaaAA
GTCGCATAATTATCTAATTATATCTCCTCTCTTCTCTACTCTAGCATTAT
CGAAGGGTCAATAAGTATCATAGGTCAATCTTTCCTTAATCCATTCGCTT
TTACGGGGTCATTGGGTCAAGATCGATGCGTgcttaaaaggaaaaaatat
cCATTGACTATTCCTCTTTTACTCGTAGCATCGAAGCCTTGAAATCTGGT
CTTGTAATTGTACGAACGTCGAGAGTAAGAACAGTGACGAAGTAGAAGAA
AGCAAATATCATCGCTACACACATGTCAAATGTCCCTTAAGTGATTTGGA
TGTCTCGTTGGAAGATGTGTATAATCATATCGTGGCCTGTATTGCTGCGG
TCAATCGAGGCTCTGAGTaa Coding sequence (CDS) from alignment at sc0000252_pilon:157925..162544+ >XLOC_035213 ID=XLOC_035213|Name=XLOC_035213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4242bp|location=Sequence derived from alignment at sc0000252_pilon:157925..162544+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAAGGTCAAAGAGGAGTCCAAGACCCAGGGGGCATTCCCTGAGCCACAA
CTCAGTGGATTCCGACTGTGCATCAAGCGCGCTTTCATTCAATAAACAAA
ATTCTTTCGAAAGTGAAGGTGGTGGTGGATGTGTTGGATGTGAAGATCTT
TTAGAATCAAAGCAGAAGAATACATGTGATCGTCAAGGAATTACAGTAGA
AGAAAGCAGATCCGAAAGGAGCTTGAAAAAGAAAGGTGAAACTTTTGATA
TGAAATCTAAAAAGACTTTAGTTGCGTTGTCAAGAGAAGAGGCATTTTCT
GAAGTGCAAACATCCCAACGAAAAAGTGTCAGGACAGTTACCACAACAAG
CaatacaaattatatttccaaaaaagaaaatatatctgAAGTGGTATTAA
ATGGAAGTTATCAAGTAGCAAAGACCAGTACACCTATTGAAAAGCAAACA
AGAACCAAATCAAAGGTAGAGTGTACGCCAATCAATAATGGGTTTTATGA
AAATTCTTCCCACGTTTCTTCCCTTGAAAAATCAGCAAAATCAAGCAgcc
aaaaacaaacattttttcagAGCAAGTTAAAGAAAACTTCAACTTGTGCT
TCTCAGAAACAGACtgtatttttaaattcattagAGGATCATGTGTTTCA
TGACACTTCTTACAAAAAAGTTGCattgtttgaaaatgatgaaCAAGAGG
AAGAACAACAGATGGTTTCAAGGACACCGCAATCCCTTGATAACAGCTTC
CATTATCTATACAAACTTAATGGTTCATCTTTGAATGATTACAGTGATCT
ATCAGAAGATGAGAATCTCTTCGAAAATAAGGTGCAACAAAATGTTAGCG
TCAACCATCAAAGGAGGAGTTTATTTCGTCAAAAACGAAGAGATTGGTAC
TTAAACCGAAGAAATTTTTCCACACAtataaacacaaataaaaagttttt
catatTAACCCTTGTCACAACATATATTTTGACATTATGGAAAAAACTGA
CACATTTAGCTCTTTTGAGAAGGACATTATTCATGATAACGAGGCTCTAC
TCTCGGTTTTCCATCCTTTCTATTGTCCATAGCCTTATCAGAAAATTGGA
ATTATATGCAAGTAGTGTAGTGgtatttttcttgaattatGCATCCAGGG
CAGTATTAGTTATCTACGAATGTGTGAAATGGTTATTTATGAAATTATTG
TCTTGTTTCACTGGCTTTGCTTCATTATTTACTgctgtcaaaaatgaaaa
attgtcaCAAAAGTCATTTGCTTTGTGCAGTTATGTTTGTACCAAAACAA
CATCATTTTGGTCAATGGTGAAGAAAAGCGAAGGTCAAAGAGGAGTCCAA
GACCCAGGGGGCATTCCCTGAGCCACAACTCAGTGGATTCCGACTGTGCA
TCAAGCGCGCTTTCATTCAATAAACAAAATTCTTTCGAAAGTGAAGGTGG
TGGTGGATGTGTTGGATGTGAAGATCTTTTAGAATCAAAGCAGAAGAATA
CATGTGATCGTCAAGGAATTACAGTAGAAGAAAGCAGATCCGAAAGGAGC
TTGAAAAAGAAAGGTGAAACTTTTGATATGAAATCTAAAAAGACTTTAGT
TGCGTTGTCAAGAGAAGAGGCATTTTCTGAAGTGCAAACATCCCAACGAA
AAAGTGTCAGGACAGTTACCACAACAAGCaatacaaattatatttccaaa
aaagaaaatatatctgAAGTGGTATTAAATGGAAGTTATCAAGTAGCAAA
GACCAGTACACCTATTGAAAAGCAAACAAGAACCAAATCAAAGGTAGAGT
GTACGCCAATCAATAATGGGTTTTATGAAAATTCTTCCCACGTTTCTTCC
CTTGAAAAATCAGCAAAATCAAGCAgccaaaaacaaacattttttcagAG
CAAGTTAAAGAAAACTTCAACTTGTGCTTCTCAGAAACAGACtgtatttt
taaattcattagAGGATCATGTGTTTCATGACACTTCTTACAAAAAAGTT
GCattgtttgaaaatgatgaaCAAGAGGAAGAACAACAGATGGTTTCAAG
GACACCGCAATCCCTTGATAACAGCTTCCATTATCTATACAAACTTAATG
GTTCATCTTTGAATGATTACAGTGATCTATCAGAAGATGAGAATCTCTTC
GAAAATAAGGTGCAACAAAATGTTAGCGTCAACCATCAAAGGAGGAGTTT
ATTTCGTCAAAAACGAAGAGATTGGTACTTAAACCGAAGAAATTTTTCCA
CACAtataaacacaaataaaaagtttttcatatTAACCCTTGTCACAACA
TATATTTTGACATTATGGAAAAAACTGACACATTTAGCTCTTTTGAGAAG
GACATTATTCATGATAACGAGGCTCTACTCTCGGTTTTCCATCCTTTCTA
TTGTCCATAGCCTTATCAGAAAATTGGAATTATATGCAAGTAGTGTAGTG
gtatttttcttgaattatGCATCCAGGGCAGTATTAGTTATCTACGAATG
TGTGAAATGGTTATTTATGAAATTATTGTCTTGTTTCACTGGCTTTGCTT
CATTATTTACTgctgtcaaaaatgaaaaattgtcaCAAAAGTCATTTGCT
TTGTGCAGTTATGTTTGTACCAAAACAACATCATTTTGGTCAATGGTGAA
GAAAAGaTGTCTAATCTTGTTGGGATTCATTGAAGAAACAAAAGATGAAA
TAgtggtttttatttttggtgGAACCAACTGCTGTGTCAGCATTTTGCTC
ATCATCTTGACCCTCCCTTTCCTCTTACTCTTCCTCACCCTTTTCTCACA
agaTGTCTAATCTTGTTGGGATTCATTGAAGAAACAAAAGATGAAATAgt
ggtttttatttttggtgGAACCAACTGCTGTGTCAGCATTTTGCTCATCA
TCTTGACCCTCCCTTTCCTCTTACTCTTCCTCACCCTTTTCTCACAagTA
TCAAAGATCGTCATCCCTGACCCCAGCAGTTTATCTGTGTCCAAGTCACA
GACTATCTTCCTTGGAACCTCAGGCAACACCATCCCTGCATGGCACTTCC
TGCCACCATCAGCAGAAATTCTTCCtccttcaaaaactttcaatgatGAA
TCCCCTGTTACACTGTATCTTCGAGAAGGGAATGATTTGAACTCTGATTT
gcaattgaatattttcaaaacattggtGTCATTGGGCTATCACGTTATTG
TACCAGTCAATGTTTTGAACGAGGCGGAGGTGTCAATAGCTTGGTCATGG
GTCaaagaaaaagctttttcaTCTTCAGCATATCTTTGGGGAGACCATAT
CGACTCGAGTATCAAAGATCGTCATCCCTGACCCCAGCAGTTTATCTGTG
TCCAAGTCACAGACTATCTTCCTTGGAACCTCAGGCAACACCATCCCTGC
ATGGCACTTCCTGCCACCATCAGCAGAAATTCTTCCtccttcaaaaactt
tcaatgatGAATCCCCTGTTACACTGTATCTTCGAGAAGGGAATGATTTG
AACTCTGATTTgcaattgaatattttcaaaacattggtGTCATTGGGCTA
TCACGTTATTGTACCAGTCAATGTTTTGAACGAGGCGGAGGTGTCAATAG
CTTGGTCATGGGTCaaagaaaaagctttttcaTCTTCAGCATATCTTTGG
GGAGACCATATCGACTCGAGCACGCTGACGGGATATGCAAAAGATTTCTG
CACACAACCACGCTGACGGGATATGCAAAAGATTTCTGCACACAACGGAT
TCCCCCAGATGGAGTGATCATTGAAACTGAACACCAAAGTTCTCAAAATT
CTGGATTCCCCCAGATGGAGTGATCATTGAAACTGAACACCAAAGTTCTC
AAAATTCTCATCGAAGCCTTGAAATCTGGTCTTGTAATTGTACGAACGTC
GAGAGTAAGAACAGTGACGAAGTAGAAGAAAGCAAATATCATCGCTACAC
ACATGTCAAATGTCCCTTAAGTGATTTGGATGTCTCGTTGGAAGATGTGT
ATAATCATATCGTGGCCTGTATTGCTGCGGTCAATCGAGGCTCTGAGTaa
CATCGAAGCCTTGAAATCTGGTCTTGTAATTGTACGAACGTCGAGAGTAA
GAACAGTGACGAAGTAGAAGAAAGCAAATATCATCGCTACACACATGTCA
AATGTCCCTTAAGTGATTTGGATGTCTCGTTGGAAGATGTGTATAATCAT
ATCGTGGCCTGTATTGCTGCGGTCAATCGAGGCTCTGAGTaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:157925..162544 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1966-2157:4429 |
| Aaloc | 1912-1965:3734 |
| Aaloc | 1873-1908:3279 |
| Aaloc | 1513-1869:2262 |
| Aaloc | 1366-1509:1918 |
| Aaloc | 850-1362:814 |
| Aaloc | 34-846:1 |
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