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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000354_pilon:272027..274246+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035210 ID=XLOC_035210|Name=XLOC_035210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2220bp|location=Sequence derived from alignment at sc0000354_pilon:272027..274246+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGTTGAAGCAAGCTACTCATTTTCTGGTATTTCTGCAAATCTTTGT
CAATATCATCTACGCATGCCCAGCAGATTGCACGTGCTATTTGACCTCAG
TTATCTGTCAGTATAACTTTCTAAAGAAAATACCGAATGGGATTCCAGAA
TCGACGACCAAGTTATATCTTGATGGAAACCAAATAGAGAGAGTTGAAAG
AGCTGAACTATCCAATTTAAAAGATTTAGAACTGTTGAGTATTGGGAGTA
ATACCATAAGTTTTATTGAGGATGATGCTTTTCATAACTTGACAAAATTG
ACCAGTCTACATATCAACGACAATAAACTGACAAGaatcaaaagaacttt
tttcagCAACTCGCCGTTATTAAGGCATGTTCGAGCTGATCGCTTATCAC
CTAATGCTCCTTTAGAAATTGATGATCACGCTTTTGAAAATCAACAAGAT
CTAGGTGAATTAAATCTAGCATCAAACAACATGGTTCGAATCTCAAATAA
CACTTTTGCTGGACTCTCAAACTTAAAGCATTTGGATATCTCCGATAACG
ACATCCAAGTTTATTCCTCGCACGCGTTTACACCTTTAACAAGCAGTCCA
ACAATTGAAATTGACGATGGTATTAAATGTTGTTGTCAAACCAAGGCTGC
TTTCACCGCATTCGGGATTTCTCAAACGTGTATTAATCCAGAAACAAACC
AACAAGGAGATATTGCATCGTCGCCATGCACTGATACAGGAGTATGTGGA
AGTTTTAGAGAATCGACGAGTGATCTTTGGCCCCCGATGCCGCCAGAACC
TACGACATCGGTAACATTTGcatcaccatcatcatcgtcatcatcttcat
caGTAGTTGCAACAAATATTGAAAGTTCATCATCACCAAAATTctcatct
tcatcatcatcgtcaACAAGCAGTATTCTTCACAATTCCTCACCATCACC
ATCGAGTAACATTGTGAGCTCATCAATGAGTGAATCGAAATCAGTTGAGA
TACAGGTGTTTCAGACATTGCTGACAGACTCGGTTTCTGATCACGTTTAC
ACAAATCACATAGATTCAGCATCATCTTCACCAGGTACAATAATGCATTC
GATCCCTTCATCCCACTTAACACAAACAGTACTTGCAAATAGTGATTTAT
CAGTTGTGAGCTCTAATATGATTTTAAGCACTTCAGTATCTTCATCGAAT
AGACTTCACAAATCAAAATCTAATTCGGTATCTGAGAGAACAACACTATC
AAGCACAAATGCATTTCACACTGAAACACTGAGCACTATGACAAAATCCT
TACTGCACGAATCAGCCATATCACCAAGCTCAAATTACGAAATAAGCACA
AATGTACTTAGCACCGAAAGCACGATGGCACAATCTTCAGAAATCTCAAT
TTATTCCCCGTCAATGTCCGATTCATACAATCTCCGGCCTGTCTCTTCCT
CACTAGACATGTCATCAGTAATTCCAGCAAATTCAATTGAACCAACTCCC
GTCTCAAAACTGAGCGTACCGTCTACTTCTATCACAAACTCTTCAATCAT
TCCTCAATCGTCAGCAGCTCCAGTGATCTCTTCTGAATCTAATGATCATA
CAACAGAGATACTAAATCACCAATATCCTTCAACTGTTAAACCAAAGCTC
GAAAGCAGTATGTCAATGCAAGAGCCTGACCATCAGACATCTTCCAAACA
CCCTCATGCAATGCCTTCAATCAGCAATGATGTTGACCAAACCACCCAAG
CAGGGACGCTTCAACCTTCCTCTCACTATCCTTTGGAAGTATCTTCAATA
ATTATGTTACATACCATATCGCCATCGCATTCAGTACCAACACTTAACGG
AACATGCAGTGTCTCGACGTGTAAAGCAGGTTGTGAATTCTCACAACAAC
ATTGCCAATGCTTCGAAAAAGGTACTTCGAAAGCCTGTCTTATCACCAGT
ACGCTAGATTCTCAAACAGGAGATGAAAACTCAATGGCAGATTGGCAGAT
GGCAATTATCATTGGATCGTGTGTCGTTGTCTTGTGTTTCATCGTCTTCT
TTATCTATTTCAAGAAGAAACAAAGTCGTGAACGACAATTTAACTTGAAC
ACGTCCCGACAAAATATGGCGATGAATGACAGTCCTCAAGGTCGTGACAA
TCGTATGTTTATTATTGAAGAGACAAACGAGGCTGGACCAGTTAATCGAC
CAATTGCAGAAATGTATTAA Coding sequence (CDS) from alignment at sc0000354_pilon:272027..274246+ >XLOC_035210 ID=XLOC_035210|Name=XLOC_035210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3696bp|location=Sequence derived from alignment at sc0000354_pilon:272027..274246+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGTTGAAGCAAGCTACTCATTTTCTGGTATTTCTGCAAATCTTTGT
CAATATCATCTACGCATGCCCAGCAGATTGCACGTGCTATTTGACCTCAG
TTATCTGTCAGTATAACTTTCTAAAGAAAATACCGAATGGGATTCCAGAA
TCGACGACCAAGTTATATCTTGATGGAAACCAAATAGAGAGAGTTGAAAG
AGCTGAACTATCCAATTTAAAAGATTTAGAACTGTTGAGTATTGGGAGTA
ATACCATAAGTTTTATTGAGGATGATGCTTTTCATAACTTGACAAAATTG
ACCAGTCTACATATCAACGACAATAAACTGACAAGaatcaaaagaacttt
tttcagCAACTCGCCGTTATTAAGGCATGTTCGAGCTGATCGCTTATCAC
CTAATGCTCCTTTAGAAATTGATGATCACGCTTTTGAAAATCAACAAGAT
CTAGGTGAATTAAATCTAGCATCAAACAACATGGTTCGAATCTCAAATAA
CACTTTTGCTGGACTCTCAAACTTAAAGCATTTGGATATCTCCGATAACG
ACATCCAAGTTTATTCCTCGCACGCGTTTACACCTTTAACAAGCAGTCCA
ACAATTGAAATTGACGATGGTATTAAATGTTGTTGTCAAACCAAGGCTGC
TTTCACCGCATTCGGGATTTCTCAAACGTGTATTAATCCAGAAACAAACC
AACAAGGAGATATTGCATCGTCGCCATGCACTGATACAGGAGTATGTGGA
AGTTTTAGAGAATCGACGAGTGATCTTTGGCCCCCGATGCCGCCAGAACC
TACGACATCGGTAACATTTGcatcaccatcatcatcgtcatcatcttcat
caGTAGTTGCAACAAATATTGAAAGTTCATCATCACCAAAATTctcatct
tcatcatcatcgtcaACAAGCAGTATTCTTCACAATTCCTCACCATCACC
ATCGAGTAACATTGTGAGCTCATCAATGAGTGAATCGAAATCAGTTGAGA
TACAGGTGTTTCAGACATTGCTGACAGACTCGGTTTCTGATCACGTTTAC
ACAAATCACATAGATTCAGCATCATCTTCACCAGATGTGGTTGAAGCAAG
CTACTCATTTTCTGGTATTTCTGCAAATCTTTGTCAATATCATCTACGCA
TGCCCAGCAGATTGCACGTGCTATTTGACCTCAGTTATCTGTCAGTATAA
CTTTCTAAAGAAAATACCGAATGGGATTCCAGAATCGACGACCAAGTTAT
ATCTTGATGGAAACCAAATAGAGAGAGTTGAAAGAGCTGAACTATCCAAT
TTAAAAGATTTAGAACTGTTGAGTATTGGGAGTAATACCATAAGTTTTAT
TGAGGATGATGCTTTTCATAACTTGACAAAATTGACCAGTCTACATATCA
ACGACAATAAACTGACAAGaatcaaaagaacttttttcagCAACTCGCCG
TTATTAAGGCATGTTCGAGCTGATCGCTTATCACCTAATGCTCCTTTAGA
AATTGATGATCACGCTTTTGAAAATCAACAAGATCTAGGTGAATTAAATC
TAGCATCAAACAACATGGTTCGAATCTCAAATAACACTTTTGCTGGACTC
TCAAACTTAAAGCATTTGGATATCTCCGATAACGACATCCAAGTTTATTC
CTCGCACGCGTTTACACCTTTAACAAGCAGTCCAACAATTGAAATTGACG
ATGGTATTAAATGTTGTTGTCAAACCAAGGCTGCTTTCACCGCATTCGGG
ATTTCTCAAACGTGTATTAATCCAGAAACAAACCAACAAGGAGATATTGC
ATCGTCGCCATGCACTGATACAGGAGTATGTGGAAGTTTTAGAGAATCGA
CGAGTGATCTTTGGCCCCCGATGCCGCCAGAACCTACGACATCGGTAACA
TTTGcatcaccatcatcatcgtcatcatcttcatcaGTAGTTGCAACAAA
TATTGAAAGTTCATCATCACCAAAATTctcatcttcatcatcatcgtcaA
CAAGCAGTATTCTTCACAATTCCTCACCATCACCATCGAGTAACATTGTG
AGCTCATCAATGAGTGAATCGAAATCAGTTGAGATACAGGTGTTTCAGAC
ATTGCTGACAGACTCGGTTTCTGATCACGTTTACACAAATCACATAGATT
CAGCATCATCTTCACCAGACATGTCATCAGTAATTCCAGCAAATTCAATT
GAACCAACTCCCGTCTCAAAACTGAGCGTACCGTCTACTTCTATCACAAA
CTCTTCAATCATTCCTCAATCGTCAGCAGCTCCAGTGATCTCTTCTGAAT
CTAATGATCATACAACAGAGATACTAAATCACCAATATCCTTCAACTGTT
AAACCAAAGCTCGAAAGCAGTATGTCAATGCAAGAGCCTGACCATCAGAC
ATCTTCCAAACACCCTCATGCAATGCCTTCAATCAGCAATGATGTTGACC
AAACCACCCAAGCAGGGACGCTTCAACCTTCCTCTCACTATCCTTTGGAA
GTATCTTCAATAATTATGTTACATACCATATCGCCATCGCATTCAGTACC
AACACTTAACGGAACATGCAGTGTCTCGACGTGTAAAGCAGGTTGTGAAT
TCTCACAACAACATTGCCAATGCTTCGAAAAAGGTACTTCGAAAGCCTGT
CTTATCACCAGTACGCTAGATTCTCAAACAGGAGATGAAAACTCAATGGC
AGATTGGCAGATGGCAATTATCATTGGATCGTGTGTCGTTGTCTTGTGTT
TCATCGTCTTCTTTATCTATTTCAAGAAGAAACAAAGTCGTGAACGACAA
TTTAACTTGAACACGTCCCGACAAAATATGGCGATGAATGACAGTCCTCA
AGGTCGTGACAATCGTATGTTTATTATTGAAGAGACAAACGAGGCTGGAC
CAGTTAATCGACCAATTGCAGAAATGTATTAAACATGTCATCAGTAATTC
CAGCAAATTCAATTGAACCAACTCCCGTCTCAAAACTGAGCGTACCGTCT
ACTTCTATCACAAACTCTTCAATCATTCCTCAATCGTCAGCAGCTCCAGT
GATCTCTTCTGAATCTAATGATCATACAACAGAGATACTAAATCACCAAT
ATCCTTCAACTGTTAAACCAAAGCTCGAAAGCAGTATGTCAATGCAAGAG
CCTGACCATCAGACATCTTCCAAACACCCTCATGCAATGCCTTCAATCAG
CAATGATGTTGACCAAACCACCCAAGCAGGGACGCTTCAACCTTCCTCTC
ACTATCCTTTGGAAGTATCTTCAATAATTATGTTACATACCATATCGCCA
TCGCATTCAGTACCAACACTTAACGGAACATGCAGTGTCTCGACGTGTAA
AGCAGGTTGTGAATTCTCACAACAACATTGCCAATGCTTCGAAAAAGGTA
CTTCGAAAGCCTGTCTTATCACCAGTACGCTAGATTCTCAAACAGGAGAT
GAAAACTCAATGGCAGATTGGCAGATGGCAATTATCATTGGATCGTGTGT
CGTTGTCTTGTGTTTCATCGTCTTCTTTATCTATTTCAAGAAGAAACAAA
GTCGTGAACGACAATTTAACTTGAACACGTCCCGACAAAATATGGCGATG
AATGACAGTCCTCAAGGTCGTGACAATCGTATGTTTATTATTGAAGAGAC
AAACGAGGCTGGACCAGTTAATCGACCAATTGCAGAAATGTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000354_pilon | genome | sc0000354_pilon:272027..274246 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1087-1848:1459 |
| Aaloc | 1-1083:1 |
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