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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:790764..794180- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035196 ID=XLOC_035196|Name=XLOC_035196|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3417bp|location=Sequence derived from alignment at sc0000007_pilon:790764..794180- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGTTCGATTTCAATGGAAGGGTTGCACTTATCACAGGTAAGAATCA
ATCGATCAAAATTCCGTGATGTACTTACCAAATCCTCCTTGTAAAAAATT
GACGAAAAAAGACAAAACTAGTTGCTGCACCTTTGATGATAGCCAGCTAG
CTACTAACACATCTATACAAGTTTCGATATGCTCTTGTTTATTCGATTCA
TCTTCAGGTGCGAGCTCAGGTATCGGTAAAGGGGCAGCAATCTACTTGGC
AAAGAATGGTGCAAAATTAGCAATCACTGGAAGAAACGAAGAAAATTTGA
AGCTTGTGGCGACTCAATGTGAAGATGTTTGCCCAAATAAAGAAAAGGTA
TTGCTCTGACCATTTCAATAATTAAAAAATATATATACTTTTGACTCTTT
GGGCGCAATATATACATTTGCCTTATGAAATGCCATTCCAAAGCCTTCCC
AGGTCCATGCAATTTTTGCGCTCATAGAGTTTTAATGGTCTCTCCATGAT
AAATTTTAGAATATTTACTACGTTCCCCCGGGGGGGGGGGAGGCACTCCA
GGTAAGTGACCTACCGGACGTGCGGCCCTTAAGGGTAGGCTTTTTGGAGT
TTGGAAAGTTTGCACTGTAAGGGTTGATTTGTGAGCAAGTGGGAAAAAGT
GCACTGTAAGGGGGTAAAATTCGGGAAAATACCAAATTTTGAGATAAAAT
TTGAGAAATTTAAAAAATTTTCGCCCTGAAAAGGGCAAAAAGTTTCGAAA
AATCGCATTATAAGGGTCGATTTTCAGCCAAATTTTTCCTGCACTGTAAG
GGTCAGATTTTAGAGACCTGATTTCTGGCTGAACGTACGGTCGTTTTCAA
AATCAAGTGCCCCCCCCCCGGGTACGTCCCACACTGGTTGTAAAAACAAC
CTATTACCACATTAATCTTTTTTACCATTCGAGGACCTCGGTGAATTTTA
GTGCTGAATTTTCATCACATCTCTCATATCTCTCCAGGTATTGACGATCG
TTGGTGATTTAAGCAAAGAAGAAGATACAGCAAGAACAATAGAAGAGACT
ATCAAACACTTTAACCAATTGGATATCTTGGTAATGTTTTCTACACTTGA
CGTTATTTTGTGGAAGTGAACAACGATGAAGGTAGATTTTCAAAGAGGTG
CAGTTATTGTCTTTCTGCAAATGTGTGAGGGGAGAGTCGAGTTATTTTTG
TCAAAGCTAGTTGCAAACTGTCAAACTTTCATTTTCAGGTAAACAGCGCG
GGTATTGTTGTGAATGGGACAGCAGAGTCAACAAGCCTTCAGGATTACGA
CATGCAAATGAACATTAACTTGAGGTATTTGTAATTTCAACCGCATATAG
CAAACGTCACGATTTAATGTAAGCCTGTAAGTACATGTATAAAAATTAGA
GACCCGTAATATCACCATCTCTTCTCTTTTCAGGTCGGTTTTTCACATTA
CGAAACTAGCAATACCACACTTGATCAAAACTAAAGGTATACTACATAAC
CATTTCACCTTTTCCGATCTCGTTGGAATGTCGGGCTTACCATTCTTTGT
TCCTATTATGGGTTATGATATTATTCGCTGTGATGGTTTCCAAAGATACA
CCACTAATACAATAATGACCGGTTAGTGAGGGCTGTTGAAATATTGCCCG
AGGTCAAGTAACGACCGAGCTTGCGAGGTTGTTGCGTTGACCAAGGGCAA
TATTTTCAGTACAGCCCGAAAAAACCGGTCATTATTGTATTTGTTAACCG
TTTCCTTCAGCTTCGATTGATTTTTAGCGCTTTATCCAGGAAAAATAGCG
AAATAAAGAAATCAAAAATTGTTTTATTTTTTGACGTCAGAAACAAAAAA
TGAGAGAAATGATGTCAACGTATTGTTCATTTTCCTTTGAAAAAGTGACG
TCACAATGAATCTTCCTAACGACGGGCAACTCTGGGCAATGTAGGCCCGT
CGTCATACGAAAAGAACCAATTGCATTGCGCAAAAAGTCGTGTAGCCCGC
TTTGAAAAAGTAACCGGTTAACAATTTTCCATTTCGAATGTTTGATTGGG
CTGTTCTAATTAATATCCATACAGGGGGGTTGACGAACTTTTTCAAGCCA
AAAATAATTCTTCAAATGTGTGGATACTCCCTGGATAATTGCAAGATTTT
CAAAAAACGCCCTCGGAAAAGTACTTCTTCATACCTTAAAGTGAGGTAGG
ATGACTAAGTCATTCTTAACTTTCTTATCACTAATAACTTTTTACGCCCT
GAGAAAATTAGAAAAGCTTTCTTTCTTGACACTCTGGAAATTCTTCTTCA
GGTTACCCCCTAGTAAAATACGCCCACTCCCTGTATGGATATAAAATTGA
ATGGCCCATTAGTTGTCATAGGACATAATCTATATAACAAAATTTACTTC
AATTTCTCGAATCATCAACGATCGCATCGCGAACAATTTTCCAATTCAAT
TTCATTTTGTAGGAAACATTGTAAATGTATCAAGCGTAACTGGCCTTCGT
TCGGTAATTAATACGTTTTTCATCGGCAATCAATCACCTGCATATTTTAC
AATTCTTGTTTAGAATATTGAATAAAGTAAAATTCACAAATCTTAACTGG
TGTAACAAGGTCCTAATTTAAGGGAGCTGAAGAGAGTGCCAAACACATTA
GACGTTCTTTTCTAACATTGGATTCCAACTATTAAAGAAAACAATTTGAC
CTTCGCTAGATTTTGGACTATGTTTGTAGGTTAGGCTTAGGGGTAGCTCT
AATTAAAAGAGATCCTAGATAGGGCCATCTTGATTTAATAATTTTTTATC
TTGACTACTATTCTCAACTTCAGTTGAGCTAGAATCTGTCAGTCTGTCAC
CTCAAAACTTTAGGGCAGGCTGGAGACTTCAAAAATGGTCGGATTCGGGC
GTGGTCACGAGTTTGAGCCTCAAAACGAGGCTAAAAACTTTGGTGCTGGC
TGGTGACTTCAAAAATGGTCCGATTCTGCCGACATTTTGCACACTTTTCC
TTGGGTGAATATCGAATATCTGGGGTTGTTTTCTTCATTTTAAGGGCGTG
GTCACAAAGTTCAGCTCAAAACGAAGCAAAAAAATTTCTTATATCAAAAA
TTTTTCTGTTGATGTTTACACTTGGACCTGCGGGTAATTTAAAAGATACT
GAATTTGAGCCAGTGCGGTTAGCACGTTCGAAAGTATTTTACTGAACTTT
TTAAACATCTTGCCTATCCTTATTAATGAATTTTTAATGTTAGTTTCCAG
GGGTTTCGACGTATTGCATGTCGAAAGCAGCCTTAGACCAATACACAAGG
ACAACAGCATTGGAGCTTGCATCTCAGCAAGTCAGATGTAACGCAGTCAA
TCCTGGTGTCATAAGAACAGAGATTCATAAACGAGGCGGTATGTCTGAAG
AAGATTATGCAAAGGTT Coding sequence (CDS) from alignment at sc0000007_pilon:790764..794180- >XLOC_035196 ID=XLOC_035196|Name=XLOC_035196|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1254bp|location=Sequence derived from alignment at sc0000007_pilon:790764..794180- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGTTCGATTTCAATGGAAGGGTTGCACTTATCACAGATGTCGTTCG
ATTTCAATGGAAGGGTTGCACTTATCACAGGTGCGAGCTCAGGTATCGGT
AAAGGGGCAGCAATCTACTTGGCAAAGAATGGTGCAAAATTAGCAATCAC
TGGAAGAAACGAAGAAAATTTGAAGCTTGTGGCGACTCAATGTGAAGATG
TTTGCCCAAATAAAGAAAAGGTGCGAGCTCAGGTATCGGTAAAGGGGCAG
CAATCTACTTGGCAAAGAATGGTGCAAAATTAGCAATCACTGGAAGAAAC
GAAGAAAATTTGAAGCTTGTGGCGACTCAATGTGAAGATGTTTGCCCAAA
TAAAGAAAAGGTATTGACGATCGTTGGTGATTTAAGCAAAGAAGAAGATA
CAGCAAGAACAATAGAAGAGACTATCAAACACTTTAACCAATTGGATATC
TTGGTATTGACGATCGTTGGTGATTTAAGCAAAGAAGAAGATACAGCAAG
AACAATAGAAGAGACTATCAAACACTTTAACCAATTGGATATCTTGGTAA
ACAGCGCGGGTATTGTTGTGAATGGGACAGCAGAGTCAACAAGCCTTCAG
GATTACGACATGCAAATGAACATTAACTTGAGGTAAACAGCGCGGGTATT
GTTGTGAATGGGACAGCAGAGTCAACAAGCCTTCAGGATTACGACATGCA
AATGAACATTAACTTGAGGTCGGTTTTTCACATTACGAAACTAGCAATAC
CACACTTGATCAAAACTAAAGGTCGGTTTTTCACATTACGAAACTAGCAA
TACCACACTTGATCAAAACTAAAGGAAACATTGTAAATGTATCAAGCGTA
ACTGGCCTTCGTTCGGAAACATTGTAAATGTATCAAGCGTAACTGGCCTT
CGTTCGTTTCCAGGGGTTTCGACGTATTGCATGTCGAAAGCAGCCTTAGA
CCAATACACAAGGACAACAGCATTGGAGCTTGCATCTCAGCAAGTCAGAT
GTAACGCAGTCAATCCTGGTGTCATAAGAACAGAGATTCATAAACGAGGC
GGTATGTCTGAAGAAGATTATGCAAAGGTTTTTCCAGGGGTTTCGACGTA
TTGCATGTCGAAAGCAGCCTTAGACCAATACACAAGGACAACAGCATTGG
AGCTTGCATCTCAGCAAGTCAGATGTAACGCAGTCAATCCTGGTGTCATA
AGAACAGAGATTCATAAACGAGGCGGTATGTCTGAAGAAGATTATGCAAA
GGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:790764..794180 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-627:175 |
| Aaloc | 415-453:954 |
| Aaloc | 361-411:1984 |
| Aaloc | 274-357:2180 |
| Aaloc | 181-273:2431 |
| Aaloc | 43-180:3209 |
| Aaloc | 1-39:3418 |
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