XLOC_035163 (mRNA) -

Overview
NameXLOC_035163
Unique NameXLOC_035163
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000016_pilon:2057399..2058490+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035163 ID=XLOC_035163|Name=XLOC_035163|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1092bp|location=Sequence derived from alignment at sc0000016_pilon:2057399..2058490+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTACATCGGACAATCCAAAAAAGGCTGCTTTTCGTCAGTGTTACTCAAG ACTTGCTGAAATTCGGTCATTTGTGGCTCGTAGATTACCGTTTGTTGCAA TGACTGCTACTGCAACCAAGTCTACGCGTGAATTTATTATTTCCAACCTT CAAATGATTACCCCAGAGTTGCTAATTATGGCACCTGGAAAGTCTAACAT CACTTATTacgttaaaaaaacaaaaaatttagattGTGATACTTTATTTG CACCATTGATCAAAAATCTAAGAGATAATGGTTACAAAGCAGAGAGGGTC ATTATCTTTTGTGACAGAAGCAGATTAAGAGACCTATAtgactcttttga aaatgaattctACAATTATTATACGTATGATGAAAGACCATTTGCGATGT TTCATCGCACAACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCCTTT CAAGACCCTGATGGTATGGTGAGAATTTTGATAGCCACCATAgcatcttt tgaaaatgaattctACAATGATTATACGTATGATGAAAGACCATTTGCGA TGTTTCATCGCACAACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCC TTTCAAGACCCTGATGGTATGGTGAGAATTTTGATAGCCACCATAGCATT TGGAATGGGGATTGATTGCAAGGATCTACATCGAATCATTCATTTTGGGG TGCCATCAGATCTTGATTCATATTTCCAAGAATCTGGTAGAGCAGGAAGA GATGACGCTCAATGCTCTGCCTTACTACTGCTTTATCCACGCTGCATTTC TCGCTATGTGAAAAAGGATATTAGAGATTATGTGACAAACACTCAACGTT GTAGGAGAGAAATTCATCTTGAGGTTTATGATTCAAAACCAAGCAAAATA CAACCAAAACATACATGTTGTGACTTTTGTCACCAAAGATGTGAGTGTGG AAATTGTGAATCACCTGAATTTTTAGTAGATCTTCTACAATCGAGAGACG AAATCGAACTGCCAGATAATGAACTTATTAATGATGAAGTAGAAGAACAA GTGGAATGCCGGGAGGGAGAATCAGAATCGGAACCAGAAATA

Coding sequence (CDS) from alignment at sc0000016_pilon:2057399..2058490+

>XLOC_035163 ID=XLOC_035163|Name=XLOC_035163|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000016_pilon:2057399..2058490+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTACATCGGACAATCCAAAAAAGGCTGCTTTTCGTCAGTGTTACTCAAG
ACTTGCTGAAATTCGGTCATTTGTGGCTCGTAGATTACCGTTTGTTGCAA
TGACTGCTACTGCAACCAAGTCTACGCGTGAATTTATTATTTCCAACCTT
CAAATGATTACCCCAGAGTTGCTAATTATGGCACCTGGAAAGTCTAACAT
CACTTATTacgttaaaaaaacaaaaaatttagattGTGATACTTTATTTG
CACCATTGATCAAAAATCTAAGAGATAATGGTTACAAAGCAGAGAGGGTC
ATTATCTTTTGTGACAGAAGCAGATTAAGAGACCTATAtgactcttttga
aaatgaattctACAATTATTATACGTATGATGAAAGACCATTTGCGATGT
TTCATCGCACAACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCCTTT
CAAGACCCTGATGGTATGGTGAGAATTTTGATAGCCACCATAgcatcttt
tgaaaatgaattctACAATGATTATACGTATGATGAAAGACCATTTGCGA
TGTTTCATCGCACAACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCC
TTTCAAGACCCTGATGGTATGGTGAGAATTTTGATAGCCACCATAGCATT
TGGAATGGGGATTGATTGCAAGGATCTACATCGAATCATTCATTTTGGGG
TGCCATCAGATCTTGATTCATATTTCCAAGAATCTGGTAGAGCAGGAAGA
GATGACGCTCAATGCTCTGCCTTACTACTGCTTTATCCACGCTGCATTTC
TCGCTATGTGAAAAAGGATATTAGAGATTATGTGACAAACACTCAACGTT
GTAGGAGAGAAATTCATCTTGAGGTTTATGATTCAAAACCAAGCAAAATA
CAACCAAAACATACATGTTGTGACTTTTGTCACCAAAGATGTGAGTGTGG
AAATTGTGAATCACCTGAATTTTTAGTAGATCTTCTACAATCGAGAGACG
AAATCGAACTGCCAGATAATGAACTTATTAATGATGAAGTAGAAGAACAA
GTGGAATGCCGGGAGGGAGAATCAGAATCGGAACCAGAAATAGGTACATC
GGACAATCCAAAAAAGGCTGCTTTTCGTCAGTGTTACTCAAGACTTGCTG
AAATTCGGTCATTTGTGGCTCGTAGATTACCGTTTGTTGCAATGACTGCT
ACTGCAACCAAGTCTACGCGTGAATTTATTATTTCCAACCTTCAAATGAT
TACCCCAGAGTTGCTAATTATGGCACCTGGAAAGTCTAACATCACTTATT
acgttaaaaaaacaaaaaatttagattGTGATACTTTATTTGCACCATTG
ATCAAAAATCTAAGAGATAATGGTTACAAAGCAGAGAGGGTCATTATCTT
TTGTGACAGAAGCAGATTAAGAGACCTATAtgactcttttgaaaatgaat
tctACAATTATTATACGTATGATGAAAGACCATTTGCGATGTTTCATCGC
ACAACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCCTTTCAAGACCC
TGATGGTATGGTGAGAATTTTGATAGCCACCATAgcatcttttgaaaatg
aattctACAATGATTATACGTATGATGAAAGACCATTTGCGATGTTTCAT
CGCACAACGAGACCAGAAATCAAGGAAAGGATAATCAAAGCCTTTCAAGA
CCCTGATGGTATGGTGAGAATTTTGATAGCCACCATAGCATTTGGAATGG
GGATTGATTGCAAGGATCTACATCGAATCATTCATTTTGGGGTGCCATCA
GATCTTGATTCATATTTCCAAGAATCTGGTAGAGCAGGAAGAGATGACGC
TCAATGCTCTGCCTTACTACTGCTTTATCCACGCTGCATTTCTCGCTATG
TGAAAAAGGATATTAGAGATTATGTGACAAACACTCAACGTTGTAGGAGA
GAAATTCATCTTGAGGTTTATGATTCAAAACCAAGCAAAATACAACCAAA
ACATACATGTTGTGACTTTTGTCACCAAAGATGTGAGTGTGGAAATTGTG
AATCACCTGAATTTTTAGTAGATCTTCTACAATCGAGAGACGAAATCGAA
CTGCCAGATAATGAACTTATTAATGATGAAGTAGAAGAACAAGTGGAATG
CCGGGAGGGAGAATCAGAATCGGAACCAGAAATA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035163XLOC_035163-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000016_pilongenomesc0000016_pilon:2057399..2058490 +
Properties
Property NameValue
Aaloc1-1092:1